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4
.gitignore
vendored
4
.gitignore
vendored
@@ -1,11 +1,10 @@
|
||||
syntax: glob
|
||||
.idea
|
||||
apierrors/errors
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||||
static/build.json
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||||
static/dashboard/node_modules
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||||
static/webapp/node_modules
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static/webapp/.git
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||||
scripts/
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||||
generators/
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||||
*.pyc
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||||
__pycache__
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||||
.ropeproject
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||||
@@ -20,3 +19,4 @@ build
|
||||
dist
|
||||
code.tar.gz
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||||
server/schema/services/_cache.json
|
||||
server/apierrors/errors/*
|
||||
|
||||
226
README.md
226
README.md
@@ -1,4 +1,4 @@
|
||||
# TRAINS Server
|
||||
# Trains Server
|
||||
|
||||
## Auto-Magical Experiment Manager & Version Control for AI
|
||||
|
||||
@@ -7,27 +7,24 @@
|
||||
[](https://img.shields.io/github/release-pre/allegroai/trains-server.svg)
|
||||
[](https://img.shields.io/badge/status-beta-yellow.svg)
|
||||
|
||||
### Help improve Trains by filling our 2-min [user survey](https://allegro.ai/lp/trains-user-survey/)
|
||||
|
||||
## Introduction
|
||||
|
||||
The **trains-server** is the backend service infrastructure for [TRAINS](https://github.com/allegroai/trains).
|
||||
The **trains-server** is the backend service infrastructure for [Trains](https://github.com/allegroai/trains).
|
||||
It allows multiple users to collaborate and manage their experiments.
|
||||
By default, TRAINS is set up to work with the TRAINS demo server, which is open to anyone and resets periodically.
|
||||
In order to host your own server, you will need to install **trains-server** and point TRAINS to it.
|
||||
By default, **Trains** is set up to work with the **Trains** demo server, which is open to anyone and resets periodically.
|
||||
In order to host your own server, you will need to launch **trains-server** and point **Trains** to it.
|
||||
|
||||
**trains-server** contains the following components:
|
||||
|
||||
* The TRAINS Web-App, a single-page UI for experiment management and browsing
|
||||
* The **Trains** Web-App, a single-page UI for experiment management and browsing
|
||||
* RESTful API for:
|
||||
* Documenting and logging experiment information, statistics and results
|
||||
* Querying experiments history, logs and results
|
||||
* Locally-hosted file server for storing images and models making them easily accessible using the Web-App
|
||||
|
||||
You can quickly setup your **trains-server** using:
|
||||
- [Docker Installation](#installation)
|
||||
- Pre-built Amazon [AWS image](#aws)
|
||||
- [Kubernetes Helm](https://github.com/allegroai/trains-server-helm#trains-server-for-kubernetes-clusters-using-helm)
|
||||
or manual [Kubernetes installation](https://github.com/allegroai/trains-server-k8s#trains-server-for-kubernetes-clusters)
|
||||
|
||||
You can quickly [deploy](#launching-trains-server) your **trains-server** using Docker, AWS EC2 AMI, or Kubernetes.
|
||||
|
||||
## System design
|
||||
|
||||
@@ -44,136 +41,43 @@ You can quickly setup your **trains-server** using:
|
||||
- Web application on sub-domain: app.\*.\*
|
||||
- API service on sub-domain: api.\*.\*
|
||||
- File storage service on sub-domain: files.\*.\*
|
||||
|
||||
## Launching trains-server
|
||||
|
||||
## Install / Upgrade - AWS <a name="aws"></a>
|
||||
### Prerequisites
|
||||
|
||||
Use one of our pre-installed Amazon Machine Images for easy deployment in AWS.
|
||||
|
||||
For details and instructions, see [TRAINS-server: AWS pre-installed images](docs/install_aws.md).
|
||||
|
||||
## Docker Installation - Linux, macOS, and Windows <a name="installation"></a>
|
||||
|
||||
Use our pre-built Docker image for easy deployment in Linux and macOS. <br>
|
||||
For [Windows](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#docker_compose_win10), please see detailed docker-compose installation instructions on our [FAQ](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#docker_compose_win10).<br>
|
||||
Latest docker images can be found [here](https://hub.docker.com/r/allegroai/trains).
|
||||
|
||||
1. Setup Docker (docker-compose installation details: [Ubuntu](docs/faq.md#ubuntu) / [macOS](docs/faq.md#mac-osx))
|
||||
|
||||
<details>
|
||||
<summary>Make sure ports 8080/8081/8008 are available for the TRAINS-server services:</summary>
|
||||
The ports 8080/8081/8008 must be available for the **trains-server** services.
|
||||
|
||||
For example, to see if port `8080` is in use:
|
||||
For example, to see if port `8080` is in use:
|
||||
|
||||
```bash
|
||||
$ sudo lsof -Pn -i4 | grep :8080 | grep LISTEN
|
||||
```
|
||||
* Linux or macOS:
|
||||
|
||||
sudo lsof -Pn -i4 | grep :8080 | grep LISTEN
|
||||
|
||||
* Windows:
|
||||
|
||||
netstat -an |find /i "8080"
|
||||
|
||||
### Launching
|
||||
|
||||
</details>
|
||||
|
||||
Increase vm.max_map_count for `ElasticSearch` docker
|
||||
Launch **trains-server** in any of the following formats:
|
||||
|
||||
- Linux
|
||||
```bash
|
||||
$ echo "vm.max_map_count=262144" > /tmp/99-trains.conf
|
||||
$ sudo mv /tmp/99-trains.conf /etc/sysctl.d/99-trains.conf
|
||||
$ sudo sysctl -w vm.max_map_count=262144
|
||||
$ sudo service docker restart
|
||||
```
|
||||
|
||||
- macOS
|
||||
```bash
|
||||
$ screen ~/Library/Containers/com.docker.docker/Data/vms/0/tty
|
||||
$ sysctl -w vm.max_map_count=262144
|
||||
```
|
||||
- Pre-built [AWS EC2 AMI](https://github.com/allegroai/trains-server/blob/master/docs/install_aws.md)
|
||||
- Pre-built [GCP Custom Image](https://github.com/allegroai/trains-server/blob/master/docs/install_gcp.md)
|
||||
- Pre-built Docker Image
|
||||
- [Linux](https://github.com/allegroai/trains-server/blob/master/docs/install_linux_mac.md)
|
||||
- [macOS](https://github.com/allegroai/trains-server/blob/master/docs/install_linux_mac.md)
|
||||
- [Windows 10](https://github.com/allegroai/trains-server/blob/master/docs/install_win.md)
|
||||
- Kubernetes
|
||||
- [Kubernetes Helm](https://github.com/allegroai/trains-server-helm#prerequisites)
|
||||
- Manual [Kubernetes installation](https://github.com/allegroai/trains-server-k8s#prerequisites)
|
||||
|
||||
1. Create local directories for the databases and storage.
|
||||
## Connecting Trains to your trains-server
|
||||
|
||||
```bash
|
||||
$ sudo mkdir -p /opt/trains/data/elastic
|
||||
$ sudo mkdir -p /opt/trains/data/mongo/db
|
||||
$ sudo mkdir -p /opt/trains/data/mongo/configdb
|
||||
$ sudo mkdir -p /opt/trains/data/redis
|
||||
$ sudo mkdir -p /opt/trains/logs
|
||||
$ sudo mkdir -p /opt/trains/data/fileserver
|
||||
$ sudo mkdir -p /opt/trains/config
|
||||
```
|
||||
|
||||
Set folder permissions
|
||||
|
||||
- Linux
|
||||
```bash
|
||||
$ sudo chown -R 1000:1000 /opt/trains
|
||||
```
|
||||
- macOS
|
||||
```bash
|
||||
$ sudo chown -R $(whoami):staff /opt/trains
|
||||
```
|
||||
|
||||
1. Download the `docker-compose.yml` file, either download [manually](https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml) or execute:
|
||||
|
||||
```bash
|
||||
$ curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml -o docker-compose.yml
|
||||
```
|
||||
|
||||
1. Launch the Docker containers <a name="launch-docker"></a>
|
||||
|
||||
```bash
|
||||
$ docker-compose -f docker-compose.yml up
|
||||
```
|
||||
|
||||
1. Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
|
||||
|
||||
* Web server on port `8080`
|
||||
* API server on port `8008`
|
||||
* File server on port `8081`
|
||||
|
||||
**\* If something went wrong along the way, check our FAQ: [Docker Setup](docs/docker_setup.md#setup-docker), [Ubuntu Support](docs/faq.md#ubuntu), [macOS Support](docs/faq.md#mac-osx)**
|
||||
|
||||
## Optional Configuration
|
||||
|
||||
The **trains-server** default configuration can be easily overridden using external configuration files. By default, the server will look for these files in `/opt/trains/config`.
|
||||
|
||||
In order to apply the new configuration, you must restart the server (see [Restarting trains-server](#restart-server)).
|
||||
|
||||
### Adding Web Login Authentication
|
||||
|
||||
By default anyone can login to the **trains-server** Web-App.
|
||||
You can configure the **trains-server** to allow only a specific set of users to access the system.
|
||||
|
||||
Enable this feature by placing `apiserver.conf` file under `/opt/trains/config`.
|
||||
|
||||
Sample `apiserver.conf` configuration file can be found [here](https://github.com/allegroai/trains-server/blob/master/docs/apiserver.conf)
|
||||
|
||||
To apply the changes, you must [restart the *trains-server*](#restart-server).
|
||||
|
||||
### Configuring the Non-Responsive Experiments Watchdog
|
||||
|
||||
The non-responsive experiment watchdog, monitors experiments that were not updated for a given period of time,
|
||||
and marks them as `aborted`. The watchdog is always active with a default of 7200 seconds (2 hours) of inactivity threshold.
|
||||
|
||||
To change the watchdog's timeouts, place a `services.conf` file under `/opt/trains/config`.
|
||||
|
||||
Sample watchdog `services.conf` configuration file can be found [here](https://github.com/allegroai/trains-server/blob/master/docs/services.conf)
|
||||
|
||||
To apply the changes, you must [restart the *trains-server*](#restart-server).
|
||||
|
||||
### Restarting trains-server <a name="restart-server"></a>
|
||||
|
||||
To restart the **trains-server**, you must first stop the containers, and then restart them.
|
||||
```bash
|
||||
$ docker-compose down
|
||||
$ docker-compose -f docker-compose.yml up
|
||||
```
|
||||
|
||||
|
||||
## Configuring **TRAINS** client
|
||||
|
||||
Once you have installed the **trains-server**, make sure to configure **TRAINS** [client](https://github.com/allegroai/trains)
|
||||
to use your locally installed server (and not the demo server).
|
||||
|
||||
- Run the `trains-init` command for an interactive setup
|
||||
|
||||
- Or manually edit `~/trains.conf` file, making sure the `api_server` value is configured correctly, for example:
|
||||
By default, the **Trains** client is set up to work with the [**Trains** demo server](https://demoapp.trains.allegro.ai/).
|
||||
To have the **Trains** client use your **trains-server** instead:
|
||||
- Run the `trains-init` command for an interactive setup.
|
||||
- Or manually edit `~/trains.conf` file, making sure the server settings (`api_server`, `web_server`, `file_server`) are configured correctly, for example:
|
||||
|
||||
api {
|
||||
# API server on port 8008
|
||||
@@ -186,26 +90,42 @@ to use your locally installed server (and not the demo server).
|
||||
files_server: "http://localhost:8081"
|
||||
}
|
||||
|
||||
* Notice that if you setup **trains-server** in a sub-domain configuration, there is no need to specify a port number,
|
||||
**Note**: If you have set up **trains-server** in a sub-domain configuration, then there is no need to specify a port number,
|
||||
it will be inferred from the http/s scheme.
|
||||
|
||||
See [Installing and Configuring TRAINS](https://github.com/allegroai/trains#configuration) for more details.
|
||||
After launching the **trains-server** and configuring the **Trains** client to use the **trains-server**,
|
||||
you can [use](https://github.com/allegroai/trains#using-trains) **Trains** in your experiments and view them in your **trains-server** web server,
|
||||
for example http://localhost:8080.
|
||||
For more information about the Trains client, see [**Trains**](https://github.com/allegroai/trains).
|
||||
|
||||
## What next?
|
||||
## Advanced Functionality
|
||||
|
||||
Now that the **trains-server** is installed, and TRAINS is configured to use it,
|
||||
you can [use](https://github.com/allegroai/trains#using-trains) TRAINS in your experiments and view them in the web server,
|
||||
for example http://localhost:8080
|
||||
**trains-server** provides a few additional useful features, which can be manually enabled:
|
||||
|
||||
* [Web login authentication](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#web-auth)
|
||||
* [Non-responsive experiments watchdog](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#watchdog-the-non-responsive-task-watchdog-settings)
|
||||
|
||||
## Restarting trains-server
|
||||
|
||||
To restart the **trains-server**, you must first stop the containers, and then restart them.
|
||||
|
||||
```bash
|
||||
docker-compose down
|
||||
docker-compose -f docker-compose.yml up
|
||||
```
|
||||
|
||||
## Upgrading <a name="upgrade"></a>
|
||||
|
||||
We are constantly updating, improving and adding to the **trains-server**.
|
||||
New releases will include new pre-built Docker images.
|
||||
When we release a new version and include a new pre-built Docker image for it, upgrade as follows:
|
||||
**trains-server** releases are also reflected in the [docker compose configuration file](https://github.com/allegroai/trains-server/blob/master/docker-compose.yml).
|
||||
We strongly encourage you to keep your **trains-server** up to date, by keeping up with the current release.
|
||||
|
||||
**Note**: The following upgrade instructions use the Linux OS as an example.
|
||||
|
||||
To upgrade your existing **trains-server** deployment:
|
||||
|
||||
1. Shut down the docker containers
|
||||
```bash
|
||||
$ docker-compose down
|
||||
docker-compose down
|
||||
```
|
||||
|
||||
1. We highly recommend backing up your data directory before upgrading.
|
||||
@@ -213,7 +133,7 @@ When we release a new version and include a new pre-built Docker image for it, u
|
||||
Assuming your data directory is `/opt/trains`, to archive all data into `~/trains_backup.tgz` execute:
|
||||
|
||||
```bash
|
||||
$ sudo tar czvf ~/trains_backup.tgz /opt/trains/data
|
||||
sudo tar czvf ~/trains_backup.tgz /opt/trains/data
|
||||
```
|
||||
|
||||
<details>
|
||||
@@ -221,29 +141,29 @@ When we release a new version and include a new pre-built Docker image for it, u
|
||||
|
||||
To restore this example backup, execute:
|
||||
```bash
|
||||
$ sudo rm -R /opt/trains/data
|
||||
$ sudo tar -xzf ~/trains_backup.tgz -C /opt/trains/data
|
||||
sudo rm -R /opt/trains/data
|
||||
sudo tar -xzf ~/trains_backup.tgz -C /opt/trains/data
|
||||
```
|
||||
</details>
|
||||
|
||||
1. Download the latest `docker-compose.yml` file, either [manually](https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml) or execute:
|
||||
1. Download the latest `docker-compose.yml` file.
|
||||
|
||||
```bash
|
||||
$ curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml -o docker-compose.yml
|
||||
curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml -o docker-compose.yml
|
||||
```
|
||||
|
||||
1. Spin up the docker containers, it will automatically pull the latest trains-server build
|
||||
1. Spin up the docker containers, it will automatically pull the latest **trains-server** build
|
||||
```bash
|
||||
$ docker-compose -f docker-compose.yml pull
|
||||
$ docker-compose -f docker-compose.yml up
|
||||
docker-compose -f docker-compose.yml pull
|
||||
docker-compose -f docker-compose.yml up
|
||||
```
|
||||
|
||||
**\* If something went wrong along the way, check our FAQ: [Docker Upgrade](docs/docker_setup.md#common-docker-upgrade-errors)**
|
||||
**\* If something went wrong along the way, check our FAQ: [Common Docker Upgrade Errors](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#common-docker-upgrade-errors).**
|
||||
|
||||
|
||||
## Community & Support
|
||||
|
||||
If you have any questions, look to the TRAINS-server [FAQ](https://github.com/allegroai/trains-server/blob/master/docs/faq.md), or
|
||||
If you have any questions, look to the Trains server [FAQ](https://github.com/allegroai/trains-server/blob/master/docs/faq.md), or
|
||||
tag your questions on [stackoverflow](https://stackoverflow.com/questions/tagged/trains) with '**trains**' tag.
|
||||
|
||||
For feature requests or bug reports, please use [GitHub issues](https://github.com/allegroai/trains-server/issues).
|
||||
|
||||
@@ -20,9 +20,12 @@ services:
|
||||
- mongo
|
||||
- elasticsearch
|
||||
environment:
|
||||
ELASTIC_SERVICE_HOST: elasticsearch
|
||||
MONGODB_SERVICE_HOST: mongo
|
||||
REDIS_SERVICE_HOST: redis
|
||||
TRAINS_ELASTIC_SERVICE_HOST: elasticsearch
|
||||
TRAINS_ELASTIC_SERVICE_PORT: 9200
|
||||
TRAINS_MONGODB_SERVICE_HOST: mongo
|
||||
TRAINS_MONGODB_SERVICE_PORT: 27017
|
||||
TRAINS_REDIS_SERVICE_HOST: redis
|
||||
TRAINS_REDIS_SERVICE_PORT: 6379
|
||||
networks:
|
||||
- backend
|
||||
elasticsearch:
|
||||
|
||||
@@ -16,9 +16,12 @@ services:
|
||||
- elasticsearch
|
||||
- fileserver
|
||||
environment:
|
||||
ELASTIC_SERVICE_HOST: elasticsearch
|
||||
MONGODB_SERVICE_HOST: mongo
|
||||
REDIS_SERVICE_HOST: redis
|
||||
TRAINS_ELASTIC_SERVICE_HOST: elasticsearch
|
||||
TRAINS_ELASTIC_SERVICE_PORT: 9200
|
||||
TRAINS_MONGODB_SERVICE_HOST: mongo
|
||||
TRAINS_MONGODB_SERVICE_PORT: 27017
|
||||
TRAINS_REDIS_SERVICE_HOST: redis
|
||||
TRAINS_REDIS_SERVICE_PORT: 6379
|
||||
ports:
|
||||
- "8008:8008"
|
||||
networks:
|
||||
@@ -114,4 +117,4 @@ networks:
|
||||
driver: bridge
|
||||
|
||||
volumes:
|
||||
mongodata:
|
||||
mongodata:
|
||||
|
||||
@@ -16,9 +16,14 @@ services:
|
||||
- elasticsearch
|
||||
- fileserver
|
||||
environment:
|
||||
ELASTIC_SERVICE_HOST: elasticsearch
|
||||
MONGODB_SERVICE_HOST: mongo
|
||||
REDIS_SERVICE_HOST: redis
|
||||
TRAINS_ELASTIC_SERVICE_HOST: elasticsearch
|
||||
TRAINS_ELASTIC_SERVICE_PORT: 9200
|
||||
TRAINS_MONGODB_SERVICE_HOST: mongo
|
||||
TRAINS_MONGODB_SERVICE_PORT: 27017
|
||||
TRAINS_REDIS_SERVICE_HOST: redis
|
||||
TRAINS_REDIS_SERVICE_PORT: 6379
|
||||
TRAINS__apiserver__mongo__pre_populate__enabled: "true"
|
||||
TRAINS__apiserver__mongo__pre_populate__zip_file: "/opt/trains/db-pre-populate/export.zip"
|
||||
ports:
|
||||
- "8008:8008"
|
||||
networks:
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
auth {
|
||||
# Fixed users login credetials
|
||||
# Fixed users login credentials
|
||||
# No other user will be able to login
|
||||
fixed_users {
|
||||
enabled: true
|
||||
|
||||
@@ -1,166 +0,0 @@
|
||||
# TRAINS-server: Using Docker Pre-Built Images
|
||||
|
||||
The pre-built Docker image for the **trains-server** is the quickest way to get started with your own **TRAINS** server.
|
||||
|
||||
You can also build the entire **trains-server** architecture using the code available in the [trains-server](https://github.com/allegroai/trains-server) repository.
|
||||
|
||||
**Note**: We tested this pre-built Docker image with Linux, only. For Windows users, we recommend installing the pre-built image on a Linux virtual machine.
|
||||
|
||||
## Prerequisites
|
||||
|
||||
* You must be logged in as a user with sudo privileges
|
||||
* Use `bash` for all command-line instructions in this installation
|
||||
|
||||
## Setup Docker
|
||||
|
||||
### Step 1: Install Docker CE
|
||||
|
||||
You must first install Docker. For instructions about installing Docker, see [Supported platforms](https://docs.docker.com/install//#support) in the Docker documentation.
|
||||
|
||||
For example, to [install in Ubuntu](https://docs.docker.com/install/linux/docker-ce/ubuntu/) / Mint (x86_64/amd64):
|
||||
|
||||
```bash
|
||||
sudo apt-get install -y apt-transport-https ca-certificates curl software-properties-common
|
||||
curl -fsSL https://download.docker.com/linux/ubuntu/gpg | sudo apt-key add -
|
||||
. /etc/os-release
|
||||
sudo add-apt-repository "deb [arch=amd64] https://download.docker.com/linux/ubuntu $UBUNTU_CODENAME stable"
|
||||
sudo apt-get update
|
||||
sudo apt-get install -y docker-ce
|
||||
```
|
||||
|
||||
### Step 2: Set the Maximum Number of Memory Map Areas
|
||||
|
||||
Elastic requires that the `vm.max_map_count` kernel setting, which is the maximum number of memory map areas a process can use, is set to at least 262144.
|
||||
|
||||
For CentOS 7, Ubuntu 16.04, Mint 18.3, Ubuntu 18.04 and Mint 19.x, we tested the following commands to set `vm.max_map_count`:
|
||||
|
||||
```bash
|
||||
echo "vm.max_map_count=262144" > /tmp/99-trains.conf
|
||||
sudo mv /tmp/99-trains.conf /etc/sysctl.d/99-trains.conf
|
||||
sudo sysctl -w vm.max_map_count=262144
|
||||
```
|
||||
|
||||
For information about setting this parameter on other systems, see the [elastic](https://www.elastic.co/guide/en/elasticsearch/reference/current/docker.html#docker-cli-run-prod-mode) documentation.
|
||||
|
||||
### Step 3: Restart the Docker daemon
|
||||
|
||||
Restart the Docker daemon.
|
||||
|
||||
```bash
|
||||
sudo service docker restart
|
||||
```
|
||||
|
||||
### Step 4: Choose a Data Directory
|
||||
|
||||
Choose a directory on your system in which all data maintained by the **trains-server** is stored.
|
||||
Create this directory, and set its owner and group to `uid` 1000. The data stored in this directory includes the database, uploaded files and logs.
|
||||
|
||||
For example, if your data directory is `/opt/trains`, then use the following command:
|
||||
|
||||
```bash
|
||||
sudo mkdir -p /opt/trains/data/elastic
|
||||
sudo mkdir -p /opt/trains/data/mongo/db
|
||||
sudo mkdir -p /opt/trains/data/mongo/configdb
|
||||
sudo mkdir -p /opt/trains/data/redis
|
||||
sudo mkdir -p /opt/trains/logs
|
||||
sudo mkdir -p /opt/trains/data/fileserver
|
||||
sudo mkdir -p /opt/trains/config
|
||||
|
||||
sudo chown -R 1000:1000 /opt/trains
|
||||
```
|
||||
|
||||
## TRAINS-server: Manually Launching Docker Containers <a name="launch"></a>
|
||||
|
||||
You can manually launch the Docker containers using the following commands.
|
||||
|
||||
If your data directory is not `/opt/trains`, then in the five `docker run` commands below, you must replace all occurrences of `/opt/trains` with your data directory path.
|
||||
|
||||
1. Launch the **trains-elastic** Docker container.
|
||||
|
||||
sudo docker run -d --restart="always" --name="trains-elastic" -e "bootstrap.memory_lock=true" --ulimit memlock=-1:-1 -e "ES_JAVA_OPTS=-Xms2g -Xmx2g" -e "bootstrap.memory_lock=true" -e "cluster.name=trains" -e "discovery.zen.minimum_master_nodes=1" -e "node.name=trains" -e "script.inline=true" -e "script.update=true" -e "thread_pool.bulk.queue_size=2000" -e "thread_pool.search.queue_size=10000" -e "xpack.security.enabled=false" -e "xpack.monitoring.enabled=false" -e "cluster.routing.allocation.node_initial_primaries_recoveries=500" -e "node.ingest=true" -e "http.compression_level=7" -e "reindex.remote.whitelist=*.*" -e "script.painless.regex.enabled=true" --network="host" -v /opt/trains/data/elastic:/usr/share/elasticsearch/data docker.elastic.co/elasticsearch/elasticsearch:5.6.16
|
||||
|
||||
1. Launch the **trains-mongo** Docker container.
|
||||
|
||||
sudo docker run -d --restart="always" --name="trains-mongo" -v /opt/trains/data/mongo/db:/data/db -v /opt/trains/data/mongo/configdb:/data/configdb --network="host" mongo:3.6.5
|
||||
|
||||
1. Launch the **trains-redis** Docker container.
|
||||
|
||||
sudo docker run -d --restart="always" --name="trains-redis" -v /opt/trains/data/redis:/data --network="host" redis:5.0
|
||||
|
||||
1. Launch the **trains-fileserver** Docker container.
|
||||
|
||||
sudo docker run -d --restart="always" --name="trains-fileserver" --network="host" -v /opt/trains/logs:/var/log/trains -v /opt/trains/data/fileserver:/mnt/fileserver allegroai/trains:latest fileserver
|
||||
|
||||
1. Launch the **trains-apiserver** Docker container.
|
||||
|
||||
sudo docker run -d --restart="always" --name="trains-apiserver" --network="host" -v /opt/trains/logs:/var/log/trains -v /opt/trains/config:/opt/trains/config allegroai/trains:latest apiserver
|
||||
|
||||
1. Launch the **trains-webserver** Docker container.
|
||||
|
||||
sudo docker run -d --restart="always" --name="trains-webserver" -p 8080:80 allegroai/trains:latest webserver
|
||||
|
||||
1. Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
|
||||
|
||||
* API server on port `8008`
|
||||
* Web server on port `8080`
|
||||
* File server on port `8081`
|
||||
|
||||
## Manually Upgrading TRAINS-server Containers <a name="upgrade"></a>
|
||||
|
||||
We are constantly updating, improving and adding to the **trains-server**.
|
||||
New releases will include new pre-built Docker images.
|
||||
When we release a new version and include a new pre-built Docker image for it, upgrade as follows:
|
||||
|
||||
1. Shut down and remove each of your Docker instances using the following commands:
|
||||
|
||||
```bash
|
||||
$ sudo docker stop <docker-name>
|
||||
$ sudo docker rm -v <docker-name>
|
||||
```
|
||||
|
||||
The Docker names are (see [Launching Docker Containers](#launch-docker)):
|
||||
|
||||
* `trains-elastic`
|
||||
* `trains-mongo`
|
||||
* `trains-redis`
|
||||
* `trains-fileserver`
|
||||
* `trains-apiserver`
|
||||
* `trains-webserver`
|
||||
|
||||
2. We highly recommend backing up your data directory!. A simple way to do that is using `tar`:
|
||||
|
||||
For example, if your data directory is `/opt/trains`, use the following command:
|
||||
|
||||
```bash
|
||||
$ sudo tar czvf ~/trains_backup.tgz /opt/trains/data
|
||||
```
|
||||
This backups all data to an archive in your home directory.
|
||||
|
||||
To restore this example backup, use the following command:
|
||||
```bash
|
||||
$ sudo rm -R /opt/trains/data
|
||||
$ sudo tar -xzf ~/trains_backup.tgz -C /opt/trains/data
|
||||
```
|
||||
|
||||
3. Pull the new **trains-server** docker image using the following command:
|
||||
|
||||
```bash
|
||||
$ sudo docker pull allegroai/trains:latest
|
||||
```
|
||||
|
||||
If you wish to pull a different version, replace `latest` with the required version number, for example:
|
||||
```bash
|
||||
$ sudo docker pull allegroai/trains:0.11.0
|
||||
```
|
||||
|
||||
4. Launch the newly released Docker image (see [Launching Docker Containers](#trains-server-manually-launching-docker-containers-)).
|
||||
|
||||
|
||||
#### Common Docker Upgrade Errors
|
||||
|
||||
* In case of a docker error: "... The container name "/trains-???" is already in use by ..."
|
||||
Try removing deprecated images with:
|
||||
```bash
|
||||
$ docker rm -f $(docker ps -a -q)
|
||||
```
|
||||
|
||||
354
docs/faq.md
354
docs/faq.md
@@ -1,77 +1,122 @@
|
||||
# TRAINS-server FAQ
|
||||
# trains-server FAQ
|
||||
|
||||
* [Deploying trains-server on Kubernetes clusters](#kubernetes)
|
||||
Launching **trains-server**
|
||||
|
||||
* [Creating a Helm Chart for trains-server Kubernetes deployment](#helm)
|
||||
* How do I launch **trains-server** on:
|
||||
|
||||
* [Running trains-server on Mac OS X](#mac-osx)
|
||||
* [Stand alone Linux Ubuntu systems?](#ubuntu)
|
||||
|
||||
* [macOS?](#mac-osx)
|
||||
|
||||
* [Windows 10?](#docker_compose_win10)
|
||||
|
||||
* [Running trains-server on Windows 10](#docker_compose_win10)
|
||||
* [How do I restart trains-server?](#restart)
|
||||
|
||||
* [Installing trains-server on stand alone Linux Ubuntu systems ](#ubuntu)
|
||||
Kubernetes
|
||||
|
||||
* [Resolving port conflicts preventing fixed users mode authentication and login](#port-conflict)
|
||||
* [Can I deploy trains-server on Kubernetes clusters?](#kubernetes)
|
||||
|
||||
* [Configuring trains-server for sub-domains and load balancers](#sub-domains)
|
||||
* [Can I create a Helm Chart for trains-server Kubernetes deployment?](#helm)
|
||||
|
||||
Configuration
|
||||
|
||||
### Deploying trains-server on Kubernetes clusters <a name="kubernetes"></a>
|
||||
* [How do I configure trains-server for sub-domains and load balancers?](#sub-domains)
|
||||
|
||||
**trains-server** supports Kubernetes. See [trains-server-k8s](https://github.com/allegroai/trains-server-k8s)
|
||||
which contains the YAML files describing the required services and detailed instructions for deploying
|
||||
**trains-server** to a Kubernetes clusters.
|
||||
* [Can I add web login authentication to trains-server?](#web-auth)
|
||||
|
||||
### Creating a Helm Chart for trains-server Kubernetes deployment <a name="helm"></a>
|
||||
* [Can I modify the non-responsive experiment watchdog settings?](#watchdog)
|
||||
|
||||
**trains-server** supports creating a Helm chart for Kubernetes deployment. See [trains-server-helm](https://github.com/allegroai/trains-server-helm)
|
||||
which you can use to create a Helm chart for **trains-server** and contains detailed instructions for deploying
|
||||
**trains-server** to a Kubernetes clusters using Helm.
|
||||
Troubleshooting
|
||||
|
||||
### Running trains-server on Mac OS X <a name="mac-osx"></a>
|
||||
* [How do I fix Docker upgrade errors?](#common-docker-upgrade-errors)
|
||||
|
||||
To install and configure **trains-server** on Mac OS X, follow the steps below.
|
||||
* [Why is web login authentication not working?](#port-conflict)
|
||||
|
||||
1. Install [docker for OS X](https://docs.docker.com/docker-for-mac/install/).
|
||||
## Launching **trains-server**
|
||||
|
||||
1. Configure [Docker](https://www.elastic.co/guide/en/elasticsearch/reference/current/docker.html#docker-cli-run-prod-mode).
|
||||
### How do I launch trains-server on stand alone Linux Ubuntu systems? <a name="ubuntu"></a>
|
||||
|
||||
$ screen ~/Library/Containers/com.docker.docker/Data/vms/0/tty
|
||||
$ sysctl -w vm.max_map_count=262144
|
||||
To launch **trains-server** on a stand alone Linux Ubuntu:
|
||||
|
||||
1. Install [docker for Ubuntu](https://docs.docker.com/install/linux/docker-ce/ubuntu/).
|
||||
|
||||
1. Install `docker-compose` using the following commands (for more detailed information, see the [Install Docker Compose](https://docs.docker.com/compose/install/) in the Docker documentation):
|
||||
|
||||
sudo curl -L "https://github.com/docker/compose/releases/download/1.24.1/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose
|
||||
sudo chmod +x /usr/local/bin/docker-compose
|
||||
|
||||
1. Remove the previous installation of **trains-server**.
|
||||
|
||||
**WARNING**: This clears all existing **Trains** databases.
|
||||
|
||||
sudo rm -R /opt/trains/
|
||||
|
||||
1. Create local directories for the databases and storage.
|
||||
|
||||
$ sudo mkdir -p /opt/trains/data/elastic
|
||||
$ sudo mkdir -p /opt/trains/data/mongo/db
|
||||
$ sudo mkdir -p /opt/trains/data/mongo/configdb
|
||||
$ sudo mkdir -p /opt/trains/data/redis
|
||||
$ sudo mkdir -p /opt/trains/logs
|
||||
$ sudo mkdir -p /opt/trains/config
|
||||
$ sudo mkdir -p /opt/trains/data/fileserver
|
||||
$ sudo chown -R $(whoami):staff /opt/trains
|
||||
sudo mkdir -p /opt/trains/data/elastic
|
||||
sudo mkdir -p /opt/trains/data/mongo/db
|
||||
sudo mkdir -p /opt/trains/data/mongo/configdb
|
||||
sudo mkdir -p /opt/trains/logs
|
||||
sudo mkdir -p /opt/trains/config
|
||||
sudo mkdir -p /opt/trains/data/fileserver
|
||||
sudo chown -R 1000:1000 /opt/trains
|
||||
|
||||
1. Clone the [trains-server](https://github.com/allegroai/trains-server) repository and change directories to the new **trains-server** directory.
|
||||
|
||||
git clone https://github.com/allegroai/trains-server.git
|
||||
cd trains-server
|
||||
|
||||
1. Run `docker-compose`
|
||||
|
||||
/usr/local/bin/docker-compose -f docker-compose.yml up
|
||||
|
||||
Your server is now running on [http://localhost:8080](http://localhost:8080)
|
||||
|
||||
### How do I launch trains-server on macOS? <a name="mac-osx"></a>
|
||||
|
||||
To launch **trains-server** on macOS:
|
||||
|
||||
1. Install [docker for macOS](https://docs.docker.com/docker-for-mac/install/).
|
||||
|
||||
1. Configure [Docker](https://www.elastic.co/guide/en/elasticsearch/reference/current/docker.html#docker-cli-run-prod-mode).
|
||||
|
||||
screen ~/Library/Containers/com.docker.docker/Data/vms/0/tty
|
||||
sysctl -w vm.max_map_count=262144
|
||||
|
||||
1. Create local directories for the databases and storage.
|
||||
|
||||
sudo mkdir -p /opt/trains/data/elastic
|
||||
sudo mkdir -p /opt/trains/data/mongo/db
|
||||
sudo mkdir -p /opt/trains/data/mongo/configdb
|
||||
sudo mkdir -p /opt/trains/data/redis
|
||||
sudo mkdir -p /opt/trains/logs
|
||||
sudo mkdir -p /opt/trains/config
|
||||
sudo mkdir -p /opt/trains/data/fileserver
|
||||
sudo chown -R $(whoami):staff /opt/trains
|
||||
|
||||
1. Open the Docker app, select **Preferences**, and then on the **File Sharing** tab, add `/opt/trains`.
|
||||
|
||||
1. Clone the [trains-server](https://github.com/allegroai/trains-server) repository and change directories to the new **trains-server** directory.
|
||||
|
||||
$ git clone https://github.com/allegroai/trains-server.git
|
||||
$ cd trains-server
|
||||
git clone https://github.com/allegroai/trains-server.git
|
||||
cd trains-server
|
||||
|
||||
1. Run `docker-compose` with the unified docker image.
|
||||
1. Run `docker-compose` with the docker compose file.
|
||||
|
||||
$ docker-compose -f docker-compose-unified.yml up
|
||||
docker-compose -f docker-compose.yml up
|
||||
|
||||
Your server is now running on [http://localhost:8080](http://localhost:8080)
|
||||
|
||||
### Running trains-server on Windows 10 <a name="docker_compose_win10"></a>
|
||||
### How do I launch trains-server on Windows 10? <a name="docker_compose_win10"></a>
|
||||
|
||||
You can run **trains-server** on Windows 10 using Docker Desktop for Windows (see the Docker [System Requirements](https://docs.docker.com/docker-for-windows/install/#system-requirements)).
|
||||
|
||||
To run **trains-server** on Windows 10, follow the steps below.
|
||||
To launch **trains-server** on Windows 10:
|
||||
|
||||
1. Install the Docker Desktop for Windows application by either:
|
||||
|
||||
* Following the [Install Docker Desktop on Windows](https://docs.docker.com/docker-for-windows/install/) instructions.
|
||||
* Running the Docker installation [wizard](https://hub.docker.com/?overlay=onboarding).
|
||||
* following the [Install Docker Desktop on Windows](https://docs.docker.com/docker-for-windows/install/) instructions.
|
||||
* running the Docker installation [wizard](https://hub.docker.com/?overlay=onboarding).
|
||||
|
||||
1. Increase the memory allocation in Docker Desktop to `4GB`.
|
||||
|
||||
@@ -83,110 +128,46 @@ To run **trains-server** on Windows 10, follow the steps below.
|
||||
|
||||
1. Create local directories for data and logs. Open PowerShell and execute the following commands:
|
||||
|
||||
mkdir c:\opt\trains\logs
|
||||
mkdir c:\opt\trains\config
|
||||
cd c:
|
||||
mkdir c:\opt\trains\data
|
||||
mkdir c:\opt\trains\data\elastic
|
||||
mkdir c:\opt\trains\data\redis
|
||||
mkdir c:\opt\trains\data\fileserver
|
||||
mkdir c:\opt\trains\logs
|
||||
|
||||
1. Save the **trains-server** docker-compose YAML file [docker-compose-win10.yml](https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose-win10.yml) as `c:\opt\trains\docker-compose.yml`.
|
||||
1. Download the **trains-server** docker-compose YAML file [docker-compose-win10.yml](https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose-win10.yml) as `c:\opt\trains\docker-compose.yml`.
|
||||
|
||||
1. Run `docker-compose`. In PowerShell, execute the following commands:
|
||||
|
||||
cd c:\opt\trains\
|
||||
docker-compose up
|
||||
docker-compose -f up docker-compose-win10.yml
|
||||
|
||||
Your server is now running on [http://localhost:8080](http://localhost:8080)
|
||||
|
||||
### Installing trains-server on stand alone Linux Ubuntu systems <a name="ubuntu"></a>
|
||||
### How do I restart trains-server? <a name="restart"></a>
|
||||
|
||||
To install **trains-server** on a stand alone Linux Ubuntu, follow the steps belows.
|
||||
Restart *trains-server* by first stopping the Docker containers and then restarting them.
|
||||
|
||||
1. Install [docker for Ubuntu](https://docs.docker.com/install/linux/docker-ce/ubuntu/).
|
||||
```bash
|
||||
docker-compose down
|
||||
docker-compose up -f docker-compose.yml
|
||||
```
|
||||
|
||||
**Note**: If you are using a different docker-compose YAML file, specify that file.
|
||||
|
||||
1. Install `docker-compose` using the following commands (for more detailed information, see the [Install Docker Compose](https://docs.docker.com/compose/install/) in the Docker documentation):
|
||||
## Kubernetes
|
||||
|
||||
sudo curl -L "https://github.com/docker/compose/releases/download/1.24.1/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose
|
||||
sudo chmod +x /usr/local/bin/docker-compose
|
||||
### Can I deploy trains-server on Kubernetes clusters? <a name="kubernetes"></a>
|
||||
|
||||
1. Remove the previous installation of **trains-server**.
|
||||
**trains-server** supports Kubernetes. See [trains-server-k8s](https://github.com/allegroai/trains-server-k8s)
|
||||
which contains the YAML files describing the required services and detailed instructions for deploying
|
||||
**trains-server** to a Kubernetes clusters.
|
||||
|
||||
**WARNING**: This clears all existing **TRAINS** databases.
|
||||
### Can I create a Helm Chart for trains-server Kubernetes deployment? <a name="helm"></a>
|
||||
|
||||
$ sudo rm -R /opt/trains/
|
||||
**trains-server** supports creating a Helm chart for Kubernetes deployment. See [trains-server-helm](https://github.com/allegroai/trains-server-helm)
|
||||
which you can use to create a Helm chart for **trains-server** and contains detailed instructions for deploying
|
||||
**trains-server** to a Kubernetes clusters using Helm.
|
||||
|
||||
1. Create local directories for the databases and storage.
|
||||
## Configuration
|
||||
|
||||
$ sudo mkdir -p /opt/trains/data/elastic
|
||||
$ sudo mkdir -p /opt/trains/data/mongo/db
|
||||
$ sudo mkdir -p /opt/trains/data/mongo/configdb
|
||||
$ sudo mkdir -p /opt/trains/logs
|
||||
$ sudo mkdir -p /opt/trains/config
|
||||
$ sudo mkdir -p /opt/trains/data/fileserver
|
||||
$ sudo chown -R 1000:1000 /opt/trains
|
||||
|
||||
1. Clone the [trains-server](https://github.com/allegroai/trains-server) repository and change directories to the new **trains-server** directory.
|
||||
|
||||
$ git clone https://github.com/allegroai/trains-server.git
|
||||
$ cd trains-server
|
||||
|
||||
1. Run `docker-compose`
|
||||
|
||||
$ /usr/local/bin/docker-compose -f docker-compose.yml up
|
||||
|
||||
Your server is now running on [http://localhost:8080](http://localhost:8080)
|
||||
|
||||
### Resolving port conflicts preventing fixed users mode authentication and login <a name="port-conflict"></a>
|
||||
|
||||
A port conflict may occur between the **trains-server** MongoDB and Elastic instances and other
|
||||
instances running on your system. **trains-server** uses the following default ports which may be in conflict with other instances:
|
||||
|
||||
* MongoDB port `27017`
|
||||
* Elastic port `9200`
|
||||
|
||||
You can check for port conflicts in the logs in `/opt/trains/log`.
|
||||
|
||||
If a port conflict occurs, first change the port in your **trains-server** `/opt/trains/server/config/default/hosts.conf` file to the new port and then
|
||||
run the `docker run` command with the `port` option specifying the new port to restart the **trains-server** instance.
|
||||
|
||||
For example, to resolve a MongoDB port conflict change port `27017` to `27018`:
|
||||
|
||||
1. Modify `/opt/trains/server/config/default/hosts.conf` changing the ports in the `mongo` section:
|
||||
|
||||
elastic {
|
||||
events {
|
||||
hosts: [{host: "127.0.0.1", port: 9200}]
|
||||
args {
|
||||
timeout: 60
|
||||
dead_timeout: 10
|
||||
max_retries: 5
|
||||
retry_on_timeout: true
|
||||
}
|
||||
index_version: "1"
|
||||
}
|
||||
}
|
||||
|
||||
mongo {
|
||||
backend {
|
||||
host: "mongodb://127.0.0.1:27018/backend"
|
||||
}
|
||||
auth {
|
||||
host: "mongodb://127.0.0.1:27018/auth"
|
||||
}
|
||||
}
|
||||
|
||||
2. Start the **trains-server** MongoDB container using `--port 27018`.
|
||||
|
||||
sudo docker run -d --restart="always" --name="trains-mongo" -v /opt/trains/data/mongo/db:/data/db -v /opt/trains/data/mongo/configdb:/data/configdb --network="host" mongo:3.6.5 mongod --port 27018
|
||||
|
||||
In a future version of **trains-server**, to start the API server, environment variables will be available to use instead of modifying the configuration file (instead of Step 1 above).
|
||||
The environment variables will be available to set different ports for both MongoDB and Elastic instances:
|
||||
|
||||
* `MONGODB_SERVICE_PORT` (e.g., `MONGODB_SERVICE_PORT=27018`)
|
||||
* `ELASTIC_SERVICE_POST` (e.g., `ELASTIC_SERVICE_POST=9201`)
|
||||
|
||||
### Configuring trains-server for sub-domains and load balancers <a name="sub-domains"></a>
|
||||
### How do I configure trains-server for sub-domains and load balancers? <a name="sub-domains"></a>
|
||||
|
||||
You can configure **trains-server** for sub-domains and a load balancer.
|
||||
|
||||
@@ -222,3 +203,126 @@ For example, if your domain is `trains.mydomain.com` and your sub-domains are `a
|
||||
|
||||
1. Run the Docker containers with our updated `docker run` commands (see [Launching Docker Containers](#https://github.com/allegroai/trains-server#launching-docker-containers)).
|
||||
|
||||
### Can I add web login authentication to trains-server? <a name="web-auth"></a>
|
||||
|
||||
By default, anyone can login to the **trains-server** Web-App.
|
||||
You can configure the **trains-server** to allow only a specific set of users to access the system.
|
||||
|
||||
To add web login authentication to **trains-server**:
|
||||
|
||||
1. If you are not using the current **trains-server** version, then [upgrade](https://github.com/allegroai/trains-server#upgrade).
|
||||
|
||||
1. In `/opt/trains/config/apiserver.conf`, add the `auth` section and in it specify the users, for example:
|
||||
|
||||
**Note**: A sample `apiserver.conf` configuration file is also available [here](https://github.com/allegroai/trains-server/blob/master/docs/apiserver.conf).
|
||||
|
||||
auth {
|
||||
# Fixed users login credentials
|
||||
# No other user will be able to login
|
||||
fixed_users {
|
||||
enabled: true
|
||||
users: [
|
||||
{
|
||||
username: "jane"
|
||||
password: "12345678"
|
||||
name: "Jane Doe"
|
||||
},
|
||||
{
|
||||
username: "john"
|
||||
password: "12345678"
|
||||
name: "John Doe"
|
||||
},
|
||||
]
|
||||
}
|
||||
}
|
||||
|
||||
1. Restart **trains-server** (see the [Restarting trains-server](#restart) FAQ).
|
||||
|
||||
### Can I modify the experiment watchdog settings? <a name="watchdog"></a>
|
||||
|
||||
The non-responsive experiment watchdog monitors experiments that were not updated for a specified period of time
|
||||
and marks them as `aborted`. The watchdog is always active.
|
||||
|
||||
You can modify the following settings for the watchdog:
|
||||
|
||||
* the time threshold (in seconds) of experiment inactivity (default value is 7200 seconds (2 hours))
|
||||
* the time interval (in seconds) between watchdog cycles
|
||||
|
||||
To change the watchdog's settings:
|
||||
|
||||
1. In `/opt/trains/config`, add the `services.conf` file and in it specify the watchdog settings, for example:
|
||||
|
||||
**Note**: A sample watchdog `services.conf` configuration file is also available [here](https://github.com/allegroai/trains-server/blob/master/docs/services.conf).
|
||||
|
||||
tasks {
|
||||
non_responsive_tasks_watchdog {
|
||||
# In-progress tasks that haven't been updated for at least 'value' seconds will be stopped by the watchdog
|
||||
threshold_sec: 7200
|
||||
|
||||
# Watchdog will sleep for this number of seconds after each cycle
|
||||
watch_interval_sec: 900
|
||||
}
|
||||
}
|
||||
|
||||
1. Restart **trains-server** (see the [Restarting trains-server](#restart) FAQ).
|
||||
|
||||
## Troubleshooting
|
||||
|
||||
### How do I fix Docker upgrade errors? <a name="common-docker-upgrade-errors"></a>
|
||||
|
||||
To resolve the Docker error "... The container name "/trains-???" is already in use by ...", try removing deprecated images:
|
||||
|
||||
docker rm -f $(docker ps -a -q)
|
||||
|
||||
### Why is web login authentication not working?
|
||||
|
||||
A port conflict between the **trains-server** MongoDB and / or Elastic instances, and other
|
||||
instances running on your system may prevent web login authentication
|
||||
from working correctly.
|
||||
|
||||
**trains-server** uses the following default ports which may be in conflict with other instances:
|
||||
|
||||
* MongoDB port `27017`
|
||||
* Elastic port `9200`
|
||||
|
||||
You can check for port conflicts in the logs in `/opt/trains/log`.
|
||||
|
||||
If a port conflict occurs, change the MongoDB and / or Elastic ports in the `docker-compose.yml`,
|
||||
and then run the Docker compose commands to restart the **trains-server** instance.
|
||||
|
||||
To change the MongoDB and / or Elastic ports for **trains-server**:
|
||||
|
||||
1. Edit the `docker-compose.yml` file.
|
||||
|
||||
1. In the `services/trainsserver/environment` section, add the following environment variable(s):
|
||||
|
||||
* For MongoDB:
|
||||
|
||||
MONGODB_SERVICE_PORT: <new-mongodb-port>
|
||||
|
||||
* For Elastic:
|
||||
|
||||
ELASTIC_SERVICE_PORT: <new-elasticsearch-port>
|
||||
|
||||
For example:
|
||||
|
||||
MONGODB_SERVICE_PORT: 27018
|
||||
ELASTIC_SERVICE_PORT: 9201
|
||||
|
||||
1. For MongoDB, in the `services/mongo/ports` section, expose the new MongoDB port:
|
||||
|
||||
<new-mongodb-port>:27017
|
||||
|
||||
For example:
|
||||
|
||||
20718:27017
|
||||
|
||||
1. For Elastic, in the `services/elasticsearch/ports` section, expose the new Elastic port:
|
||||
|
||||
<new-elsticsearch-port>:9200
|
||||
|
||||
For example:
|
||||
|
||||
9201:9200
|
||||
|
||||
2. Restart **trains-server** (see the [Restarting trains-server](#restart) FAQ).
|
||||
@@ -1,32 +1,36 @@
|
||||
# **TRAINS-server**: AWS pre-installed images
|
||||
# Deploying **trains-server** on AWS
|
||||
|
||||
In order to easily deploy **trains-server** on AWS, we created the following Amazon Machine Images (AMIs).
|
||||
To easily deploy **trains-server** on AWS, use one of our pre-built Amazon Machine Images (AMIs).
|
||||
We provide AMIs per region for each released version of **trains-server**, see [Released versions](#released-versions) below.
|
||||
|
||||
Service port numbers on these AMIs are:
|
||||
- Web: 8080
|
||||
- API: 8008
|
||||
- File Server: 8081
|
||||
Once the AMI is up and running, [configure the Trains client](https://github.com/allegroai/trains/blob/master/README.md#configuration) to use your **trains-server**.
|
||||
The service port numbers on our **trains-server** AMIs:
|
||||
|
||||
Persistent storage configuration:
|
||||
- MongoDB: /opt/trains/data/mongo/
|
||||
- ElasticSearch: /opt/trains/data/elastic/
|
||||
- File Server: /mnt/fileserver/
|
||||
- Web application: `8080`
|
||||
- API Server: `8008`
|
||||
- File Server: `8081`
|
||||
|
||||
Instructions on launching a custom AMI from the EC2 console can be found [here](https://aws.amazon.com/premiumsupport/knowledge-center/launch-instance-custom-ami/)
|
||||
and a detailed version [here](https://docs.aws.amazon.com/AWSEC2/latest/UserGuide/launching-instance.html).
|
||||
The persistent storage configuration:
|
||||
|
||||
The minimum recommended instance type is **t3a.large**
|
||||
- MongoDB: `/opt/trains/data/mongo/`
|
||||
- ElasticSearch: `/opt/trains/data/elastic/`
|
||||
- File Server: `/mnt/fileserver/`
|
||||
|
||||
For examples and use cases, check the [Trains usage examples](https://github.com/allegroai/trains/blob/master/docs/trains_examples.md).
|
||||
|
||||
For instructions on launching a custom AMI from the EC2 console, see the [AWS Knowledge Center](https://aws.amazon.com/premiumsupport/knowledge-center/launch-instance-custom-ami/) or detailed instructions in the [AWS Documentation](https://docs.aws.amazon.com/AWSEC2/latest/UserGuide/launching-instance.html).
|
||||
|
||||
The minimum recommended amount of RAM is 8GB. For example, **t3.large** or **t3a.large** would have the minimum recommended amount of resources.
|
||||
|
||||
## Upgrading
|
||||
|
||||
In order to upgrade **trains-server** on an existing EC2 instance based on one of these AMIs, SSH into the instance and follow the [upgrade instructions](../README.md#upgrade) for **trains-server**.
|
||||
To upgrade **trains-server** on an existing EC2 instance based on one of these AMIs, SSH into the instance and follow the [upgrade instructions](../README.md#upgrade) for **trains-server**.
|
||||
|
||||
### Upgrading AMI's to v0.12
|
||||
**Including the automatically updated AMI**
|
||||
### Note on upgrading AMIs to v0.12
|
||||
|
||||
Version 0.12 introduced an additional REDIS docker to the trains-server setup.
|
||||
This upgrade includes the automatically updated AMI in Version 0.12. It also includes an additional REDIS docker to the **trains-server** setup.
|
||||
|
||||
AMI upgrading instructions:
|
||||
To upgrade the AMI:
|
||||
|
||||
1. SSH to the EC2 machine running one of the `Latest Version AMI's`
|
||||
2. Execute the following bash commands
|
||||
@@ -44,47 +48,123 @@ AMI upgrading instructions:
|
||||
|
||||
## Released versions
|
||||
|
||||
The following sections provide a list containing AMI Image ID per region for each released **trains-server** version.
|
||||
The following sections contain lists of AMI Image IDs, per region, for each released **trains-server** version.
|
||||
|
||||
### Latest Version AMI <a name="autoupdate"></a>
|
||||
**For easier upgrades: The following AMI automatically update to the latest release every reboot**
|
||||
### Latest version AMI - v0.14.2 (auto update)<a name="autoupdate"></a>
|
||||
|
||||
* **eu-north-1** : ami-055909c1b9471451d
|
||||
* **ap-south-1** : ami-0476123cc77226faf
|
||||
* **eu-west-3** : ami-01df7d35ab63cca70
|
||||
* **eu-west-2** : ami-00e8004c11fd0228e
|
||||
* **eu-west-1** : ami-04293fbba6d3acad1
|
||||
* **ap-northeast-2** : ami-004331f9c5eb13e94
|
||||
* **ap-northeast-1** : ami-08cc80e2049b30e61
|
||||
* **sa-east-1** : ami-06d814a0b6ffa3153
|
||||
* **ca-central-1** : ami-069210ff757e9c1b7
|
||||
* **ap-southeast-1** : ami-0d12cc70d6e9c0f39
|
||||
* **ap-southeast-2** : ami-0b4615aa76c055267
|
||||
* **eu-central-1** : ami-06537f431e52e4763
|
||||
* **us-east-2** : ami-0c3cfbcb8e72ecfc5
|
||||
* **us-west-1** : ami-0d83de031b83b6880
|
||||
* **us-west-2** : ami-06968633c4f7187c4
|
||||
* **us-east-1** : ami-07ff2f5f7ef99e8f6
|
||||
For easier upgrades, the following AMIs automatically update to the latest release every reboot:
|
||||
|
||||
### v0.12.1
|
||||
* **eu-north-1** : ami-003118a8103286d84
|
||||
* **ap-south-1** : ami-02dfe86baa48e096f
|
||||
* **eu-west-3** : ami-0cc1f01267d2a780d
|
||||
* **eu-west-2** : ami-0e4c8332e5ce09585
|
||||
* **eu-west-1** : ami-03459a2f0b0a3b1ab
|
||||
* **ap-northeast-2** : ami-08f6c2aed3a53f24c
|
||||
* **ap-northeast-1** : ami-0b798eab95a7c5435
|
||||
* **sa-east-1** : ami-0d3ee166c09f0d1b2
|
||||
* **ca-central-1** : ami-00a758c56bd63acd5
|
||||
* **ap-southeast-1** : ami-0be64d4988cd03fbb
|
||||
* **ap-southeast-2** : ami-02087310d43a63f31
|
||||
* **eu-central-1** : ami-097bbefeac0c74225
|
||||
* **us-east-2** : ami-07eda256712b90f4d
|
||||
* **us-west-1** : ami-02ef2b55cbd01c7df
|
||||
* **us-west-2** : ami-037c6176ef4735360
|
||||
* **us-east-1** : ami-08715c20c0e3f1c15
|
||||
* **eu-north-1** : ami-095cc888970c06e09
|
||||
* **ap-south-1** : ami-07019e7b3febea37e
|
||||
* **eu-west-3** : ami-0433d76badf430c16
|
||||
* **eu-west-2** : ami-05794c2b23ff79990
|
||||
* **eu-west-1** : ami-03e3bcabd1863d666
|
||||
* **ap-northeast-2** : ami-00f14188b66a5803e
|
||||
* **ap-northeast-1** : ami-005c93e30c99dab0c
|
||||
* **sa-east-1** : ami-0d819231779e7d264
|
||||
* **ca-central-1** : ami-0eff2fd400939d960
|
||||
* **ap-southeast-1** : ami-049b21bfa0d35c21c
|
||||
* **ap-southeast-2** : ami-0318b96a72d5da068
|
||||
* **eu-central-1** : ami-0cdb9d794340b9704
|
||||
* **us-east-2** : ami-0d846a080fc5a9345
|
||||
* **us-west-1** : ami-0ef970342625159bf
|
||||
* **us-west-2** : ami-04f3d13b75c642506
|
||||
* **us-east-1** : ami-01bef4da91280a322
|
||||
|
||||
### v0.14.2 (static update)
|
||||
|
||||
* **eu-north-1** : ami-006d491e9e8869248
|
||||
* **ap-south-1** : ami-0e55ec221687f98e7
|
||||
* **eu-west-3** : ami-06ad9cf3c05c83e91
|
||||
* **eu-west-2** : ami-0d05839268e748cff
|
||||
* **eu-west-1** : ami-0d14c297789ce0d7a
|
||||
* **ap-northeast-2** : ami-0d7fd775f0e76cc6f
|
||||
* **ap-northeast-1** : ami-0c0a6e1daeb3f7a9c
|
||||
* **sa-east-1** : ami-01e0c5e30e94ec887
|
||||
* **ca-central-1** : ami-07a31896832734897
|
||||
* **ap-southeast-1** : ami-0886d5b2d4b7fccd5
|
||||
* **ap-southeast-2** : ami-0397d5a2db3c356fe
|
||||
* **eu-central-1** : ami-0629f26eea22f5c17
|
||||
* **us-east-2** : ami-0499c3d7bb45a1a6e
|
||||
* **us-west-1** : ami-02fa8a961a4daf9f0
|
||||
* **us-west-2** : ami-05c711cfab4342468
|
||||
* **us-east-1** : ami-0b97d99a08012c726
|
||||
|
||||
### v0.14.1 (static update)
|
||||
|
||||
* **eu-north-1** : ami-036defe1885dced2e
|
||||
* **ap-south-1** : ami-0b403aa1da6a5dc17
|
||||
* **eu-west-3** : ami-0d30c2d330d1255c4
|
||||
* **eu-west-2** : ami-06f0e8d075e50a029
|
||||
* **eu-west-1** : ami-0da721d874f282b6d
|
||||
* **ap-northeast-2** : ami-03bffe94675dd5f8c
|
||||
* **ap-northeast-1** : ami-0f96520d646423673
|
||||
* **sa-east-1** : ami-0c2f706a3b7d97282
|
||||
* **ca-central-1** : ami-0da74525dcfd74e32
|
||||
* **ap-southeast-1** : ami-066368a21cf6d232b
|
||||
* **ap-southeast-2** : ami-0bfd09170067f7318
|
||||
* **eu-central-1** : ami-06aa99b1c41492986
|
||||
* **us-east-2** : ami-065c1880f59d03272
|
||||
* **us-west-1** : ami-0b7f6b896f5058eba
|
||||
* **us-west-2** : ami-0041e10ca68eef29a
|
||||
* **us-east-1** : ami-0b7125e4305bbd7eb
|
||||
|
||||
### v0.14.0 (static update)
|
||||
* **eu-north-1** : ami-02de71586ec496e38
|
||||
* **ap-south-1** : ami-074b03849b51852e5
|
||||
* **eu-west-3** : ami-022c388835e0eeb03
|
||||
* **eu-west-2** : ami-0a151c236c6b27707
|
||||
* **eu-west-1** : ami-06de69b06b4e73312
|
||||
* **ap-northeast-2** : ami-0ee821b72d9f669b1
|
||||
* **ap-northeast-1** : ami-03687ae215e64e100
|
||||
* **sa-east-1** : ami-01eb83364b7f667af
|
||||
* **ca-central-1** : ami-02e9b35f9c90377e6
|
||||
* **ap-southeast-1** : ami-0d3ab5ab0048fea51
|
||||
* **ap-southeast-2** : ami-0bd39d908fe3a9e06
|
||||
* **eu-central-1** : ami-0b8638701311b35c4
|
||||
* **us-east-2** : ami-02ff039693fc3a614
|
||||
* **us-west-1** : ami-08634f7dfb608a9a7
|
||||
* **us-west-2** : ami-034d693ef742b9333
|
||||
* **us-east-1** : ami-0b828b05c323dde7f
|
||||
|
||||
### v0.13.0 (static update)
|
||||
* **eu-north-1** : ami-0d9c74a015e7510d8
|
||||
* **ap-south-1** : ami-02acd6dd0659bb5c1
|
||||
* **eu-west-3** : ami-0f0cc5cb6d9afd194
|
||||
* **eu-west-2** : ami-0298fdc0860206ed9
|
||||
* **eu-west-1** : ami-0cdc072e528401d5e
|
||||
* **ap-northeast-2** : ami-0055579cc95b0e53e
|
||||
* **ap-northeast-1** : ami-0ced7becb9b83b5d0
|
||||
* **sa-east-1** : ami-033345d0f16a1b5e4
|
||||
* **ca-central-1** : ami-06c63b05aed47ae67
|
||||
* **ap-southeast-1** : ami-09f0355f367f30602
|
||||
* **ap-southeast-2** : ami-0bd2314163ce0fba0
|
||||
* **eu-central-1** : ami-05fbae957df63e366
|
||||
* **us-east-2** : ami-050c51b5b4074d3fc
|
||||
* **us-west-1** : ami-06ad513073d4e5a19
|
||||
* **us-west-2** : ami-0c96e1361d1d4ca94
|
||||
* **us-east-1** : ami-07b669040d1eea213
|
||||
|
||||
### v0.12.1 (static update)
|
||||
* **eu-north-1** : ami-003118a8103286d84
|
||||
* **ap-south-1** : ami-02dfe86baa48e096f
|
||||
* **eu-west-3** : ami-0cc1f01267d2a780d
|
||||
* **eu-west-2** : ami-0e4c8332e5ce09585
|
||||
* **eu-west-1** : ami-03459a2f0b0a3b1ab
|
||||
* **ap-northeast-2** : ami-08f6c2aed3a53f24c
|
||||
* **ap-northeast-1** : ami-0b798eab95a7c5435
|
||||
* **sa-east-1** : ami-0d3ee166c09f0d1b2
|
||||
* **ca-central-1** : ami-00a758c56bd63acd5
|
||||
* **ap-southeast-1** : ami-0be64d4988cd03fbb
|
||||
* **ap-southeast-2** : ami-02087310d43a63f31
|
||||
* **eu-central-1** : ami-097bbefeac0c74225
|
||||
* **us-east-2** : ami-07eda256712b90f4d
|
||||
* **us-west-1** : ami-02ef2b55cbd01c7df
|
||||
* **us-west-2** : ami-037c6176ef4735360
|
||||
* **us-east-1** : ami-08715c20c0e3f1c15
|
||||
|
||||
### v0.12.0 (static update)
|
||||
|
||||
### v0.12.0
|
||||
* **eu-north-1** : ami-03ff8ab48cd43e77e
|
||||
* **ap-south-1** : ami-079c1a41ff836487c
|
||||
* **eu-west-3** : ami-0121ef0398ae87ab0
|
||||
@@ -102,7 +182,8 @@ The following sections provide a list containing AMI Image ID per region for eac
|
||||
* **us-west-2** : ami-0018d5a7e58966848
|
||||
* **us-east-1** : ami-08f24178fc14a84d2
|
||||
|
||||
### v0.11.0
|
||||
### v0.11.0 (static update)
|
||||
|
||||
* **eu-north-1** : ami-0cbe338f058018c97
|
||||
* **ap-south-1** : ami-06d72ff894f7a5e5d
|
||||
* **eu-west-3** : ami-00f2a45d67df2d2f3
|
||||
@@ -120,7 +201,8 @@ The following sections provide a list containing AMI Image ID per region for eac
|
||||
* **us-west-2** : ami-0e384b6f78bf96ebe
|
||||
* **us-east-1** : ami-0a7b46f907d5d9c4a
|
||||
|
||||
### v0.10.1
|
||||
### v0.10.1 (static update)
|
||||
|
||||
* **eu-north-1** : ami-09937ec4d18350c32
|
||||
* **ap-south-1** : ami-089d6ba7541ec4c7f
|
||||
* **eu-west-3** : ami-0accb1a94bdd5c5c1
|
||||
@@ -138,7 +220,8 @@ The following sections provide a list containing AMI Image ID per region for eac
|
||||
* **us-west-2** : ami-0d1cb8ba7de246ff0
|
||||
* **us-east-1** : ami-049ccba6abdb40cba
|
||||
|
||||
### v0.10.0
|
||||
### v0.10.0 (static update)
|
||||
|
||||
* **eu-north-1** : ami-05ba33c763877e54e
|
||||
* **ap-south-1** : ami-0529eec569161cae5
|
||||
* **eu-west-3** : ami-03cb9396f63e26ff6
|
||||
@@ -157,7 +240,7 @@ The following sections provide a list containing AMI Image ID per region for eac
|
||||
* **us-west-2** : ami-04a522ecb2250fb44
|
||||
* **us-east-1** : ami-0a66ddbd50959f91e
|
||||
|
||||
### v0.9.0
|
||||
### v0.9.0 (static update)
|
||||
|
||||
* **us-east-1** : ami-0991ad536ecbacdac
|
||||
* **eu-north-1** : ami-07cbcdff501b14afe
|
||||
@@ -175,3 +258,4 @@ The following sections provide a list containing AMI Image ID per region for eac
|
||||
* **us-east-2** : ami-03b01914b07428488
|
||||
* **us-west-1** : ami-0cf4768e9d47ed076
|
||||
* **us-west-2** : ami-0b145f37da31eb9fb
|
||||
|
||||
|
||||
58
docs/install_gcp.md
Normal file
58
docs/install_gcp.md
Normal file
@@ -0,0 +1,58 @@
|
||||
# Deploying Trains Server on Google Cloud Platform
|
||||
|
||||
To easily deploy Trains Server on GCP, use one of our pre-built GCP Custom Images.
|
||||
We provide Custom Images for each released version of Trains Server, see [Released versions](#released-versions) below.
|
||||
|
||||
Once your GCP instance is up and running using our Custom Image, [configure the Trains client](https://github.com/allegroai/trains/blob/master/README.md#configuration) to use your **trains-server**.
|
||||
The service port numbers on our Trains Server GCP Custom Image are:
|
||||
|
||||
- Web application: `8080`
|
||||
- API Server: `8008`
|
||||
- File Server: `8081`
|
||||
|
||||
The persistent storage configuration:
|
||||
|
||||
- MongoDB: `/opt/trains/data/mongo/`
|
||||
- ElasticSearch: `/opt/trains/data/elastic/`
|
||||
- File Server: `/mnt/fileserver/`
|
||||
|
||||
For examples and use cases, check the [Trains usage examples](https://github.com/allegroai/trains/blob/master/docs/trains_examples.md).
|
||||
|
||||
## Importing the Custom Image to your GCP account
|
||||
|
||||
In order to launch an instance using the Trains Server GCP Custom Image, you'll need to import the image to your custom images list.
|
||||
|
||||
**Note:** there's **no need** to upload the image file to Google Cloud Storage - we already provide links to image files stored in Google Storage
|
||||
|
||||
To import the image to your custom images list:
|
||||
1. In the Cloud Console, go to the [Images](https://console.cloud.google.com/compute/images) page.
|
||||
1. At the top of the page, click **Create image**.
|
||||
1. In the **Name** field, specify a unique name for the image.
|
||||
1. Optionally, specify an image family for your new image, or configure specific encryption settings for the image.
|
||||
1. Click the **Source** menu and select **Cloud Storage file**.
|
||||
1. Enter the Trains Server image bucket path (see [Trains Server GCP Custom Image](#released-versions)), for example:
|
||||
`allegro-files/trains-server/trains-server.tar.gz`
|
||||
1. Click the **Create** button to import the image. The process can take several minutes depending on the size of the boot disk image.
|
||||
|
||||
For more information see [Import the image to your custom images list](https://cloud.google.com/compute/docs/import/import-existing-image#import_image) in the [Compute Engine Documentation](https://cloud.google.com/compute/docs).
|
||||
|
||||
## Launching an instance with a Custom Image
|
||||
|
||||
For instructions on launching an instance using a GCP Custom Image, see the [Manually importing virtual disks](https://cloud.google.com/compute/docs/import/import-existing-image#overview) in the [Compute Engine Documentation](https://cloud.google.com/compute/docs).
|
||||
For more information on Custom Images, see [Custom Images](https://cloud.google.com/compute/docs/images#custom_images) in the Compute Engine Documentation.
|
||||
|
||||
The minimum recommended requirements for Trains Server are:
|
||||
- 2 vCPUs
|
||||
- 7.5GB RAM
|
||||
|
||||
## Upgrading
|
||||
|
||||
To upgrade **trains-server** on an existing GCP instance based on one of these Custom Images, SSH into the instance and follow the [upgrade instructions](../README.md#upgrade) for **trains-server**.
|
||||
|
||||
## Released versions
|
||||
|
||||
The following sections contain lists of Custom Image URLs (exported in different formats) for each released **trains-server** version.
|
||||
|
||||
### Latest version image (v0.14.1)
|
||||
|
||||
- https://storage.googleapis.com/allegro-files/trains-server/trains-server.tar.gz
|
||||
97
docs/install_linux_mac.md
Normal file
97
docs/install_linux_mac.md
Normal file
@@ -0,0 +1,97 @@
|
||||
# Launching the **trains-server** Docker in Linux or macOS
|
||||
|
||||
For Linux or macOS, use our pre-built Docker image for easy deployment. The latest Docker images can be found [here](https://hub.docker.com/r/allegroai/trains).
|
||||
|
||||
For Linux users:
|
||||
|
||||
* You must be logged in as a user with sudo privileges.
|
||||
* Use `bash` for all command-line instructions in this installation.
|
||||
|
||||
To launch **trains-server** on Linux or macOS:
|
||||
|
||||
1. Install Docker.
|
||||
|
||||
* Linux - see [Docker for Ubuntu](https://docs.docker.com/install/linux/docker-ce/ubuntu/).
|
||||
* macOS - see [Docker for macOS](https://docs.docker.com/docker-for-mac/install/).
|
||||
|
||||
1. Verify the Docker CE installation. Execute the command:
|
||||
|
||||
sudo docker run hello-world
|
||||
|
||||
The expected is output is:
|
||||
|
||||
Hello from Docker!
|
||||
This message shows that your installation appears to be working correctly.
|
||||
To generate this message, Docker took the following steps:
|
||||
|
||||
1. The Docker client contacted the Docker daemon.
|
||||
2. The Docker daemon pulled the "hello-world" image from the Docker Hub. (amd64)
|
||||
3. The Docker daemon created a new container from that image which runs the executable that produces the output you are currently reading.
|
||||
4. The Docker daemon streamed that output to the Docker client, which sent it to your terminal.
|
||||
|
||||
1. For Linux only, install `docker-compose`. Execute the following commands (for more information, see [Install Docker Compose](https://docs.docker.com/compose/install/) in the Docker documentation):
|
||||
|
||||
sudo curl -L "https://github.com/docker/compose/releases/download/1.24.1/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose
|
||||
sudo chmod +x /usr/local/bin/docker-compose
|
||||
|
||||
1. Increase `vm.max_map_count` for ElasticSearch docker.
|
||||
|
||||
Linux:
|
||||
|
||||
echo "vm.max_map_count=262144" > /tmp/99-trains.conf
|
||||
sudo mv /tmp/99-trains.conf /etc/sysctl.d/99-trains.conf
|
||||
sudo sysctl -w vm.max_map_count=262144
|
||||
sudo service docker restart
|
||||
|
||||
macOS:
|
||||
|
||||
screen ~/Library/Containers/com.docker.docker/Data/vms/0/tty
|
||||
sysctl -w vm.max_map_count=262144
|
||||
|
||||
|
||||
1. Remove any previous installation of **trains-server**.
|
||||
|
||||
**WARNING**: This clears all existing **Trains** databases.
|
||||
|
||||
sudo rm -R /opt/trains/
|
||||
|
||||
1. Create local directories for the databases and storage.
|
||||
|
||||
sudo mkdir -p /opt/trains/data/elastic
|
||||
sudo mkdir -p /opt/trains/data/mongo/db
|
||||
sudo mkdir -p /opt/trains/data/mongo/configdb
|
||||
sudo mkdir -p /opt/trains/data/redis
|
||||
sudo mkdir -p /opt/trains/logs
|
||||
sudo mkdir -p /opt/trains/config
|
||||
sudo mkdir -p /opt/trains/data/fileserver
|
||||
|
||||
1. For macOS only, open the Docker app, select **Preferences**, and then on the **File Sharing** tab, add `/opt/trains`.
|
||||
|
||||
1. Grant access to the Dockers.
|
||||
|
||||
Linux:
|
||||
|
||||
sudo chown -R 1000:1000 /opt/trains
|
||||
|
||||
macOS:
|
||||
|
||||
sudo chown -R $(whoami):staff /opt/trains
|
||||
|
||||
1. Download the **trains-server** docker-compose YAML file.
|
||||
|
||||
cd /opt/trains
|
||||
curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml -o docker-compose.yml
|
||||
|
||||
1. Run `docker-compose` with the downloaded configuration file.
|
||||
|
||||
sudo docker-compose -f docker-compose.yml up
|
||||
|
||||
Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
|
||||
|
||||
* Web server on port `8080`
|
||||
* API server on port `8008`
|
||||
* File server on port `8081`
|
||||
|
||||
## Next Step
|
||||
|
||||
Configure the [Trains client for trains-server](https://github.com/allegroai/trains/blob/master/README.md#configuration).
|
||||
50
docs/install_win.md
Normal file
50
docs/install_win.md
Normal file
@@ -0,0 +1,50 @@
|
||||
# Launching the **trains-server** Docker in Windows 10
|
||||
|
||||
For Windows, we recommend launching our pre-built Docker image on a Linux virtual machine.
|
||||
However, you can launch **trains-server** on Windows 10 using Docker Desktop for Windows (see the Docker [System Requirements](https://docs.docker.com/docker-for-windows/install/#system-requirements)).
|
||||
|
||||
To launch **trains-server** on Windows 10:
|
||||
|
||||
1. Install the Docker Desktop for Windows application by either:
|
||||
|
||||
* Following the [Install Docker Desktop on Windows](https://docs.docker.com/docker-for-windows/install/) instructions.
|
||||
* Running the Docker installation [wizard](https://hub.docker.com/?overlay=onboarding).
|
||||
|
||||
1. Increase the memory allocation in Docker Desktop to `4GB`.
|
||||
|
||||
1. In your Windows notification area (system tray), right click the Docker icon.
|
||||
|
||||
1. Click *Settings*, *Advanced*, and then set the memory to at least `4096`.
|
||||
|
||||
1. Click *Apply*.
|
||||
|
||||
1. Remove any previous installation of **trains-server**.
|
||||
|
||||
**WARNING**: This clears all existing **Trains** databases.
|
||||
|
||||
rmdir c:\opt\trains /s
|
||||
|
||||
1. Create local directories for data and logs. Open PowerShell and execute the following commands:
|
||||
|
||||
cd c:
|
||||
mkdir c:\opt\trains\data
|
||||
mkdir c:\opt\trains\logs
|
||||
|
||||
1. Save the **trains-server** docker-compose YAML file.
|
||||
|
||||
cd c:\opt\trains
|
||||
curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose-win10.yml -o docker-compose-win10.yml
|
||||
|
||||
1. Run `docker-compose`. In PowerShell, execute the following commands:
|
||||
|
||||
docker-compose -f docker-compose-win10.yml up
|
||||
|
||||
Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
|
||||
|
||||
* Web server on port `8080`
|
||||
* API server on port `8008`
|
||||
* File server on port `8081`
|
||||
|
||||
## Next Step
|
||||
|
||||
Configure the [Trains client for trains-server](https://github.com/allegroai/trains/blob/master/README.md#configuration).
|
||||
@@ -14,6 +14,9 @@ app = Flask(__name__)
|
||||
CORS(app, **config.get("fileserver.cors"))
|
||||
Compress(app)
|
||||
|
||||
if os.environ.get("TRAINS_UPLOAD_FOLDER"):
|
||||
app.config["UPLOAD_FOLDER"] = os.environ.get("TRAINS_UPLOAD_FOLDER")
|
||||
|
||||
|
||||
@app.route("/", methods=["POST"])
|
||||
def upload():
|
||||
|
||||
1
server/api_version.py
Normal file
1
server/api_version.py
Normal file
@@ -0,0 +1 @@
|
||||
__version__ = "2.7.0"
|
||||
@@ -89,6 +89,8 @@ _error_codes = {
|
||||
1003: ('worker_registered', 'worker is already registered'),
|
||||
1004: ('worker_not_registered', 'worker is not registered'),
|
||||
1005: ('worker_stats_not_found', 'worker stats not found'),
|
||||
|
||||
1104: ('invalid_scroll_id', 'Invalid scroll id'),
|
||||
},
|
||||
|
||||
(401, 'unauthorized'): {
|
||||
@@ -105,7 +107,6 @@ _error_codes = {
|
||||
|
||||
(403, 'forbidden'): {
|
||||
10: ('routing_error', 'forbidden (routing error)'),
|
||||
11: ('missing_routing_header', 'forbidden (missing routing header)'),
|
||||
12: ('blocked_internal_endpoint', 'forbidden (blocked internal endpoint)'),
|
||||
20: ('role_not_allowed', 'forbidden (not allowed for role)'),
|
||||
21: ('no_write_permission', 'forbidden (modification not allowed)'),
|
||||
@@ -121,6 +122,7 @@ _error_codes = {
|
||||
100: ('data_error', 'general data error'),
|
||||
101: ('inconsistent_data', 'inconsistent data encountered in document'),
|
||||
102: ('database_unavailable', 'database is temporarily unavailable'),
|
||||
110: ('update_failed', 'update failed'),
|
||||
|
||||
# Index-related issues
|
||||
201: ('missing_index', 'missing internal index'),
|
||||
|
||||
@@ -5,12 +5,12 @@ from typing import Union, Type, Iterable
|
||||
|
||||
import jsonmodels.errors
|
||||
import six
|
||||
import validators
|
||||
from jsonmodels import fields
|
||||
from jsonmodels.fields import _LazyType, NotSet
|
||||
from jsonmodels.models import Base as ModelBase
|
||||
from jsonmodels.validators import Enum as EnumValidator
|
||||
from luqum.parser import parser, ParseError
|
||||
from validators import email as email_validator, domain as domain_validator
|
||||
|
||||
from apierrors import errors
|
||||
|
||||
@@ -66,9 +66,7 @@ class DictField(fields.BaseField):
|
||||
value_types = tuple()
|
||||
|
||||
return tuple(
|
||||
_LazyType(type_)
|
||||
if isinstance(type_, six.string_types)
|
||||
else type_
|
||||
_LazyType(type_) if isinstance(type_, six.string_types) else type_
|
||||
for type_ in value_types
|
||||
)
|
||||
|
||||
@@ -78,6 +76,9 @@ class DictField(fields.BaseField):
|
||||
if not self.value_types:
|
||||
return
|
||||
|
||||
if not value:
|
||||
return
|
||||
|
||||
for item in value.values():
|
||||
self.validate_single_value(item)
|
||||
|
||||
@@ -104,7 +105,7 @@ class IntField(fields.IntField):
|
||||
|
||||
|
||||
def validate_lucene_query(value):
|
||||
if value == '':
|
||||
if value == "":
|
||||
return
|
||||
try:
|
||||
parser.parse(value)
|
||||
@@ -122,6 +123,7 @@ class LuceneQueryField(fields.StringField):
|
||||
|
||||
class NullableEnumValidator(EnumValidator):
|
||||
"""Validator for enums that allows a None value."""
|
||||
|
||||
def validate(self, value):
|
||||
if value is not None:
|
||||
super(NullableEnumValidator, self).validate(value)
|
||||
@@ -150,10 +152,6 @@ class EnumField(fields.StringField):
|
||||
|
||||
|
||||
class ActualEnumField(fields.StringField):
|
||||
@property
|
||||
def types(self):
|
||||
return (self.__enum,)
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
enum_class: Type[Enum],
|
||||
@@ -164,12 +162,13 @@ class ActualEnumField(fields.StringField):
|
||||
**kwargs
|
||||
):
|
||||
self.__enum = enum_class
|
||||
self.types = (enum_class,)
|
||||
# noinspection PyTypeChecker
|
||||
choices = list(enum_class)
|
||||
validator_cls = EnumValidator if required else NullableEnumValidator
|
||||
validators = [*(validators or []), validator_cls(*choices)]
|
||||
super().__init__(
|
||||
default=default and self.parse_value(default),
|
||||
default=self.parse_value(default) if default else NotSet,
|
||||
*args,
|
||||
required=required,
|
||||
validators=validators,
|
||||
@@ -194,7 +193,7 @@ class EmailField(fields.StringField):
|
||||
super().validate(value)
|
||||
if value is None:
|
||||
return
|
||||
if validators.email(value) is not True:
|
||||
if email_validator(value) is not True:
|
||||
raise errors.bad_request.InvalidEmailAddress()
|
||||
|
||||
|
||||
@@ -203,7 +202,7 @@ class DomainField(fields.StringField):
|
||||
super().validate(value)
|
||||
if value is None:
|
||||
return
|
||||
if validators.domain(value) is not True:
|
||||
if domain_validator(value) is not True:
|
||||
raise errors.bad_request.InvalidDomainName()
|
||||
|
||||
|
||||
|
||||
@@ -58,3 +58,7 @@ class UpdateResponse(models.Base):
|
||||
class PagedRequest(models.Base):
|
||||
page = fields.IntField()
|
||||
page_size = fields.IntField()
|
||||
|
||||
|
||||
class IdResponse(models.Base):
|
||||
id = fields.StringField(required=True)
|
||||
|
||||
@@ -1,9 +1,12 @@
|
||||
from typing import Sequence
|
||||
|
||||
from jsonmodels.fields import StringField
|
||||
from jsonmodels import validators
|
||||
from jsonmodels.fields import StringField, BoolField
|
||||
from jsonmodels.models import Base
|
||||
from jsonmodels.validators import Length
|
||||
|
||||
from apimodels import ListField, IntField, ActualEnumField
|
||||
from bll.event.event_metrics import EventType
|
||||
from bll.event.scalar_key import ScalarKeyEnum
|
||||
|
||||
|
||||
@@ -17,4 +20,44 @@ class ScalarMetricsIterHistogramRequest(HistogramRequestBase):
|
||||
|
||||
|
||||
class MultiTaskScalarMetricsIterHistogramRequest(HistogramRequestBase):
|
||||
tasks: Sequence[str] = ListField(items_types=str)
|
||||
tasks: Sequence[str] = ListField(
|
||||
items_types=str, validators=[Length(minimum_value=1)]
|
||||
)
|
||||
|
||||
|
||||
class TaskMetric(Base):
|
||||
task: str = StringField(required=True)
|
||||
metric: str = StringField(required=True)
|
||||
|
||||
|
||||
class DebugImagesRequest(Base):
|
||||
metrics: Sequence[TaskMetric] = ListField(
|
||||
items_types=TaskMetric, validators=[Length(minimum_value=1)]
|
||||
)
|
||||
iters: int = IntField(default=1, validators=validators.Min(1))
|
||||
navigate_earlier: bool = BoolField(default=True)
|
||||
refresh: bool = BoolField(default=False)
|
||||
scroll_id: str = StringField()
|
||||
|
||||
|
||||
class IterationEvents(Base):
|
||||
iter: int = IntField()
|
||||
events: Sequence[dict] = ListField(items_types=dict)
|
||||
|
||||
|
||||
class MetricEvents(Base):
|
||||
task: str = StringField()
|
||||
metric: str = StringField()
|
||||
iterations: Sequence[IterationEvents] = ListField(items_types=IterationEvents)
|
||||
|
||||
|
||||
class DebugImageResponse(Base):
|
||||
metrics: Sequence[MetricEvents] = ListField(items_types=MetricEvents)
|
||||
scroll_id: str = StringField()
|
||||
|
||||
|
||||
class TaskMetricsRequest(Base):
|
||||
tasks: Sequence[str] = ListField(
|
||||
items_types=str, validators=[Length(minimum_value=1)]
|
||||
)
|
||||
event_type: EventType = ActualEnumField(EventType, required=True)
|
||||
|
||||
@@ -9,7 +9,7 @@ from apimodels.tasks import PublishResponse as TaskPublishResponse
|
||||
class CreateModelRequest(models.Base):
|
||||
name = fields.StringField(required=True)
|
||||
uri = fields.StringField(required=True)
|
||||
labels = DictField(value_types=string_types+(int,), required=True)
|
||||
labels = DictField(value_types=string_types+(int,))
|
||||
tags = ListField(items_types=string_types)
|
||||
system_tags = ListField(items_types=string_types)
|
||||
comment = fields.StringField()
|
||||
|
||||
@@ -12,3 +12,4 @@ class ReportStatsOptionResponse(Base):
|
||||
enabled_time = DateTimeField(nullable=True)
|
||||
enabled_version = StringField(nullable=True)
|
||||
enabled_user = StringField(nullable=True)
|
||||
current_version = StringField()
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
import six
|
||||
from jsonmodels import models
|
||||
from jsonmodels.fields import StringField, BoolField, IntField
|
||||
from jsonmodels.fields import StringField, BoolField, IntField, EmbeddedField
|
||||
from jsonmodels.validators import Enum
|
||||
|
||||
from apimodels import DictField, ListField
|
||||
@@ -9,6 +9,24 @@ from database.model.task.task import TaskType
|
||||
from database.utils import get_options
|
||||
|
||||
|
||||
class ArtifactTypeData(models.Base):
|
||||
preview = StringField()
|
||||
content_type = StringField()
|
||||
data_hash = StringField()
|
||||
|
||||
|
||||
class Artifact(models.Base):
|
||||
key = StringField(required=True)
|
||||
type = StringField(required=True)
|
||||
mode = StringField(validators=Enum("input", "output"), default="output")
|
||||
uri = StringField()
|
||||
hash = StringField()
|
||||
content_size = IntField()
|
||||
timestamp = IntField()
|
||||
type_data = EmbeddedField(ArtifactTypeData)
|
||||
display_data = ListField([list])
|
||||
|
||||
|
||||
class StartedResponse(UpdateResponse):
|
||||
started = IntField()
|
||||
|
||||
@@ -72,3 +90,22 @@ class CreateRequest(TaskData):
|
||||
|
||||
class PingRequest(TaskRequest):
|
||||
pass
|
||||
|
||||
|
||||
class CloneRequest(TaskRequest):
|
||||
new_task_name = StringField()
|
||||
new_task_comment = StringField()
|
||||
new_task_tags = ListField([str])
|
||||
new_task_system_tags = ListField([str])
|
||||
new_task_parent = StringField()
|
||||
new_task_project = StringField()
|
||||
execution_overrides = DictField()
|
||||
|
||||
|
||||
class AddOrUpdateArtifactsRequest(TaskRequest):
|
||||
artifacts = ListField([Artifact], required=True)
|
||||
|
||||
|
||||
class AddOrUpdateArtifactsResponse(models.Base):
|
||||
added = ListField([str])
|
||||
updated = ListField([str])
|
||||
|
||||
464
server/bll/event/debug_images_iterator.py
Normal file
464
server/bll/event/debug_images_iterator.py
Normal file
@@ -0,0 +1,464 @@
|
||||
from collections import defaultdict
|
||||
from concurrent.futures.thread import ThreadPoolExecutor
|
||||
from functools import partial
|
||||
from itertools import chain
|
||||
from operator import attrgetter, itemgetter
|
||||
|
||||
import attr
|
||||
import dpath
|
||||
from boltons.iterutils import bucketize
|
||||
from elasticsearch import Elasticsearch
|
||||
from redis import StrictRedis
|
||||
from typing import Sequence, Tuple, Optional, Mapping
|
||||
|
||||
import database
|
||||
from apierrors import errors
|
||||
from bll.redis_cache_manager import RedisCacheManager
|
||||
from bll.event.event_metrics import EventMetrics
|
||||
from config import config
|
||||
from database.errors import translate_errors_context
|
||||
from jsonmodels.models import Base
|
||||
from jsonmodels.fields import StringField, ListField, IntField
|
||||
|
||||
from database.model.task.metrics import MetricEventStats
|
||||
from database.model.task.task import Task
|
||||
from timing_context import TimingContext
|
||||
from utilities.json import loads, dumps
|
||||
|
||||
|
||||
class VariantScrollState(Base):
|
||||
name: str = StringField(required=True)
|
||||
recycle_url_marker: str = StringField()
|
||||
last_invalid_iteration: int = IntField()
|
||||
|
||||
|
||||
class MetricScrollState(Base):
|
||||
task: str = StringField(required=True)
|
||||
name: str = StringField(required=True)
|
||||
last_min_iter: Optional[int] = IntField()
|
||||
last_max_iter: Optional[int] = IntField()
|
||||
timestamp: int = IntField(default=0)
|
||||
variants: Sequence[VariantScrollState] = ListField([VariantScrollState])
|
||||
|
||||
def reset(self):
|
||||
"""Reset the scrolling state for the metric"""
|
||||
self.last_min_iter = self.last_max_iter = None
|
||||
|
||||
|
||||
class DebugImageEventsScrollState(Base):
|
||||
id: str = StringField(required=True)
|
||||
metrics: Sequence[MetricScrollState] = ListField([MetricScrollState])
|
||||
|
||||
def to_json(self):
|
||||
return dumps(self.to_struct())
|
||||
|
||||
@classmethod
|
||||
def from_json(cls, s):
|
||||
return cls(**loads(s))
|
||||
|
||||
|
||||
@attr.s(auto_attribs=True)
|
||||
class DebugImagesResult(object):
|
||||
metric_events: Sequence[tuple] = []
|
||||
next_scroll_id: str = None
|
||||
|
||||
|
||||
class DebugImagesIterator:
|
||||
EVENT_TYPE = "training_debug_image"
|
||||
STATE_EXPIRATION_SECONDS = 3600
|
||||
|
||||
@property
|
||||
def _max_workers(self):
|
||||
return config.get("services.events.max_metrics_concurrency", 4)
|
||||
|
||||
def __init__(self, redis: StrictRedis, es: Elasticsearch):
|
||||
self.es = es
|
||||
self.cache_manager = RedisCacheManager(
|
||||
state_class=DebugImageEventsScrollState,
|
||||
redis=redis,
|
||||
expiration_interval=self.STATE_EXPIRATION_SECONDS,
|
||||
)
|
||||
|
||||
def get_task_events(
|
||||
self,
|
||||
company_id: str,
|
||||
metrics: Sequence[Tuple[str, str]],
|
||||
iter_count: int,
|
||||
navigate_earlier: bool = True,
|
||||
refresh: bool = False,
|
||||
state_id: str = None,
|
||||
) -> DebugImagesResult:
|
||||
es_index = EventMetrics.get_index_name(company_id, self.EVENT_TYPE)
|
||||
if not self.es.indices.exists(es_index):
|
||||
return DebugImagesResult()
|
||||
|
||||
unique_metrics = set(metrics)
|
||||
state = self.cache_manager.get_state(state_id) if state_id else None
|
||||
if not state:
|
||||
state = DebugImageEventsScrollState(
|
||||
id=database.utils.id(),
|
||||
metrics=self._init_metric_states(es_index, list(unique_metrics)),
|
||||
)
|
||||
else:
|
||||
state_metrics = set((m.task, m.name) for m in state.metrics)
|
||||
if state_metrics != unique_metrics:
|
||||
raise errors.bad_request.InvalidScrollId(
|
||||
"while getting debug images events", scroll_id=state_id
|
||||
)
|
||||
|
||||
if refresh:
|
||||
self._reinit_outdated_metric_states(company_id, es_index, state)
|
||||
for metric_state in state.metrics:
|
||||
metric_state.reset()
|
||||
|
||||
res = DebugImagesResult(next_scroll_id=state.id)
|
||||
try:
|
||||
with ThreadPoolExecutor(self._max_workers) as pool:
|
||||
res.metric_events = list(
|
||||
pool.map(
|
||||
partial(
|
||||
self._get_task_metric_events,
|
||||
es_index=es_index,
|
||||
iter_count=iter_count,
|
||||
navigate_earlier=navigate_earlier,
|
||||
),
|
||||
state.metrics,
|
||||
)
|
||||
)
|
||||
finally:
|
||||
self.cache_manager.set_state(state)
|
||||
|
||||
return res
|
||||
|
||||
def _reinit_outdated_metric_states(
|
||||
self, company_id, es_index, state: DebugImageEventsScrollState
|
||||
):
|
||||
"""
|
||||
Determines the metrics for which new debug image events were added
|
||||
since their states were initialized and reinits these states
|
||||
"""
|
||||
task_ids = set(metric.task for metric in state.metrics)
|
||||
tasks = Task.objects(id__in=list(task_ids), company=company_id).only(
|
||||
"id", "metric_stats"
|
||||
)
|
||||
|
||||
def get_last_update_times_for_task_metrics(task: Task) -> Sequence[Tuple]:
|
||||
"""For metrics that reported debug image events get tuples of task_id/metric_name and last update times"""
|
||||
metric_stats: Mapping[str, MetricEventStats] = task.metric_stats
|
||||
if not metric_stats:
|
||||
return []
|
||||
|
||||
return [
|
||||
(
|
||||
(task.id, stats.metric),
|
||||
stats.event_stats_by_type[self.EVENT_TYPE].last_update,
|
||||
)
|
||||
for stats in metric_stats.values()
|
||||
if self.EVENT_TYPE in stats.event_stats_by_type
|
||||
]
|
||||
|
||||
update_times = dict(
|
||||
chain.from_iterable(
|
||||
get_last_update_times_for_task_metrics(task) for task in tasks
|
||||
)
|
||||
)
|
||||
outdated_metrics = [
|
||||
metric
|
||||
for metric in state.metrics
|
||||
if (metric.task, metric.name) in update_times
|
||||
and update_times[metric.task, metric.name] > metric.timestamp
|
||||
]
|
||||
state.metrics = [
|
||||
*(metric for metric in state.metrics if metric not in outdated_metrics),
|
||||
*(
|
||||
self._init_metric_states(
|
||||
es_index,
|
||||
[(metric.task, metric.name) for metric in outdated_metrics],
|
||||
)
|
||||
),
|
||||
]
|
||||
|
||||
def _init_metric_states(
|
||||
self, es_index, metrics: Sequence[Tuple[str, str]]
|
||||
) -> Sequence[MetricScrollState]:
|
||||
"""
|
||||
Returned initialized metric scroll stated for the requested task metrics
|
||||
"""
|
||||
tasks = defaultdict(list)
|
||||
for (task, metric) in metrics:
|
||||
tasks[task].append(metric)
|
||||
|
||||
with ThreadPoolExecutor(self._max_workers) as pool:
|
||||
return list(
|
||||
chain.from_iterable(
|
||||
pool.map(
|
||||
partial(self._init_metric_states_for_task, es_index=es_index),
|
||||
tasks.items(),
|
||||
)
|
||||
)
|
||||
)
|
||||
|
||||
def _init_metric_states_for_task(
|
||||
self, task_metrics: Tuple[str, Sequence[str]], es_index
|
||||
) -> Sequence[MetricScrollState]:
|
||||
"""
|
||||
Return metric scroll states for the task filled with the variant states
|
||||
for the variants that reported any debug images
|
||||
"""
|
||||
task, metrics = task_metrics
|
||||
es_req: dict = {
|
||||
"size": 0,
|
||||
"query": {
|
||||
"bool": {
|
||||
"must": [{"term": {"task": task}}, {"terms": {"metric": metrics}}]
|
||||
}
|
||||
},
|
||||
"aggs": {
|
||||
"metrics": {
|
||||
"terms": {
|
||||
"field": "metric",
|
||||
"size": EventMetrics.MAX_METRICS_COUNT,
|
||||
},
|
||||
"aggs": {
|
||||
"last_event_timestamp": {"max": {"field": "timestamp"}},
|
||||
"variants": {
|
||||
"terms": {
|
||||
"field": "variant",
|
||||
"size": EventMetrics.MAX_VARIANTS_COUNT,
|
||||
},
|
||||
"aggs": {
|
||||
"urls": {
|
||||
"terms": {
|
||||
"field": "url",
|
||||
"order": {"max_iter": "desc"},
|
||||
"size": 1, # we need only one url from the most recent iteration
|
||||
},
|
||||
"aggs": {
|
||||
"max_iter": {"max": {"field": "iter"}},
|
||||
"iters": {
|
||||
"top_hits": {
|
||||
"sort": {"iter": {"order": "desc"}},
|
||||
"size": 2, # need two last iterations so that we can take
|
||||
# the second one as invalid
|
||||
"_source": "iter",
|
||||
}
|
||||
},
|
||||
},
|
||||
}
|
||||
},
|
||||
},
|
||||
},
|
||||
}
|
||||
},
|
||||
}
|
||||
|
||||
with translate_errors_context(), TimingContext("es", "_init_metric_states"):
|
||||
es_res = self.es.search(index=es_index, body=es_req, routing=task)
|
||||
if "aggregations" not in es_res:
|
||||
return []
|
||||
|
||||
def init_variant_scroll_state(variant: dict):
|
||||
"""
|
||||
Return new variant scroll state for the passed variant bucket
|
||||
If the image urls get recycled then fill the last_invalid_iteration field
|
||||
"""
|
||||
state = VariantScrollState(name=variant["key"])
|
||||
top_iter_url = dpath.get(variant, "urls/buckets")[0]
|
||||
iters = dpath.get(top_iter_url, "iters/hits/hits")
|
||||
if len(iters) > 1:
|
||||
state.last_invalid_iteration = dpath.get(iters[1], "_source/iter")
|
||||
return state
|
||||
|
||||
return [
|
||||
MetricScrollState(
|
||||
task=task,
|
||||
name=metric["key"],
|
||||
variants=[
|
||||
init_variant_scroll_state(variant)
|
||||
for variant in dpath.get(metric, "variants/buckets")
|
||||
],
|
||||
timestamp=dpath.get(metric, "last_event_timestamp/value"),
|
||||
)
|
||||
for metric in dpath.get(es_res, "aggregations/metrics/buckets")
|
||||
]
|
||||
|
||||
def _get_task_metric_events(
|
||||
self,
|
||||
metric: MetricScrollState,
|
||||
es_index: str,
|
||||
iter_count: int,
|
||||
navigate_earlier: bool,
|
||||
) -> Tuple:
|
||||
"""
|
||||
Return task metric events grouped by iterations
|
||||
Update metric scroll state
|
||||
"""
|
||||
if metric.last_max_iter is None:
|
||||
# the first fetch is always from the latest iteration to the earlier ones
|
||||
navigate_earlier = True
|
||||
|
||||
must_conditions = [
|
||||
{"term": {"task": metric.task}},
|
||||
{"term": {"metric": metric.name}},
|
||||
]
|
||||
must_not_conditions = []
|
||||
|
||||
range_condition = None
|
||||
if navigate_earlier and metric.last_min_iter is not None:
|
||||
range_condition = {"lt": metric.last_min_iter}
|
||||
elif not navigate_earlier and metric.last_max_iter is not None:
|
||||
range_condition = {"gt": metric.last_max_iter}
|
||||
if range_condition:
|
||||
must_conditions.append({"range": {"iter": range_condition}})
|
||||
|
||||
if navigate_earlier:
|
||||
"""
|
||||
When navigating to earlier iterations consider only
|
||||
variants whose invalid iterations border is lower than
|
||||
our starting iteration. For these variants make sure
|
||||
that only events from the valid iterations are returned
|
||||
"""
|
||||
if not metric.last_min_iter:
|
||||
variants = metric.variants
|
||||
else:
|
||||
variants = list(
|
||||
v
|
||||
for v in metric.variants
|
||||
if v.last_invalid_iteration is None
|
||||
or v.last_invalid_iteration < metric.last_min_iter
|
||||
)
|
||||
if not variants:
|
||||
return metric.task, metric.name, []
|
||||
must_conditions.append(
|
||||
{"terms": {"variant": list(v.name for v in variants)}}
|
||||
)
|
||||
else:
|
||||
"""
|
||||
When navigating to later iterations all variants may be relevant.
|
||||
For the variants whose invalid border is higher than our starting
|
||||
iteration make sure that only events from valid iterations are returned
|
||||
"""
|
||||
variants = list(
|
||||
v
|
||||
for v in metric.variants
|
||||
if v.last_invalid_iteration is not None
|
||||
and v.last_invalid_iteration > metric.last_max_iter
|
||||
)
|
||||
|
||||
variants_conditions = [
|
||||
{
|
||||
"bool": {
|
||||
"must": [
|
||||
{"term": {"variant": v.name}},
|
||||
{"range": {"iter": {"lte": v.last_invalid_iteration}}},
|
||||
]
|
||||
}
|
||||
}
|
||||
for v in variants
|
||||
if v.last_invalid_iteration is not None
|
||||
]
|
||||
if variants_conditions:
|
||||
must_not_conditions.append({"bool": {"should": variants_conditions}})
|
||||
|
||||
es_req = {
|
||||
"size": 0,
|
||||
"query": {
|
||||
"bool": {"must": must_conditions, "must_not": must_not_conditions}
|
||||
},
|
||||
"aggs": {
|
||||
"iters": {
|
||||
"terms": {
|
||||
"field": "iter",
|
||||
"size": iter_count,
|
||||
"order": {"_term": "desc" if navigate_earlier else "asc"},
|
||||
},
|
||||
"aggs": {
|
||||
"variants": {
|
||||
"terms": {
|
||||
"field": "variant",
|
||||
"size": EventMetrics.MAX_VARIANTS_COUNT,
|
||||
},
|
||||
"aggs": {
|
||||
"events": {
|
||||
"top_hits": {"sort": {"url": {"order": "desc"}}}
|
||||
}
|
||||
},
|
||||
}
|
||||
},
|
||||
}
|
||||
},
|
||||
}
|
||||
with translate_errors_context(), TimingContext("es", "get_debug_image_events"):
|
||||
es_res = self.es.search(index=es_index, body=es_req, routing=metric.task)
|
||||
if "aggregations" not in es_res:
|
||||
return metric.task, metric.name, []
|
||||
|
||||
def get_iteration_events(variant_buckets: Sequence[dict]) -> Sequence:
|
||||
return [
|
||||
ev["_source"]
|
||||
for v in variant_buckets
|
||||
for ev in dpath.get(v, "events/hits/hits")
|
||||
]
|
||||
|
||||
iterations = [
|
||||
{
|
||||
"iter": it["key"],
|
||||
"events": get_iteration_events(dpath.get(it, "variants/buckets")),
|
||||
}
|
||||
for it in dpath.get(es_res, "aggregations/iters/buckets")
|
||||
]
|
||||
if not navigate_earlier:
|
||||
iterations.sort(key=itemgetter("iter"), reverse=True)
|
||||
if iterations:
|
||||
metric.last_max_iter = iterations[0]["iter"]
|
||||
metric.last_min_iter = iterations[-1]["iter"]
|
||||
|
||||
# Commented for now since the last invalid iteration is calculated in the beginning
|
||||
# if navigate_earlier and any(
|
||||
# variant.last_invalid_iteration is None for variant in variants
|
||||
# ):
|
||||
# """
|
||||
# Variants validation flags due to recycling can
|
||||
# be set only on navigation to earlier frames
|
||||
# """
|
||||
# iterations = self._update_variants_invalid_iterations(variants, iterations)
|
||||
|
||||
return metric.task, metric.name, iterations
|
||||
|
||||
@staticmethod
|
||||
def _update_variants_invalid_iterations(
|
||||
variants: Sequence[VariantScrollState], iterations: Sequence[dict]
|
||||
) -> Sequence[dict]:
|
||||
"""
|
||||
This code is currently not in used since the invalid iterations
|
||||
are calculated during MetricState initialization
|
||||
For variants that do not have recycle url marker set it from the
|
||||
first event
|
||||
For variants that do not have last_invalid_iteration set check if the
|
||||
recycle marker was reached on a certain iteration and set it to the
|
||||
corresponding iteration
|
||||
For variants that have a newly set last_invalid_iteration remove
|
||||
events from the invalid iterations
|
||||
Return the updated iterations list
|
||||
"""
|
||||
variants_lookup = bucketize(variants, attrgetter("name"))
|
||||
for it in iterations:
|
||||
iteration = it["iter"]
|
||||
events_to_remove = []
|
||||
for event in it["events"]:
|
||||
variant = variants_lookup[event["variant"]][0]
|
||||
if (
|
||||
variant.last_invalid_iteration
|
||||
and variant.last_invalid_iteration >= iteration
|
||||
):
|
||||
events_to_remove.append(event)
|
||||
continue
|
||||
event_url = event.get("url")
|
||||
if not variant.recycle_url_marker:
|
||||
variant.recycle_url_marker = event_url
|
||||
elif variant.recycle_url_marker == event_url:
|
||||
variant.last_invalid_iteration = iteration
|
||||
events_to_remove.append(event)
|
||||
if events_to_remove:
|
||||
it["events"] = [ev for ev in it["events"] if ev not in events_to_remove]
|
||||
return [it for it in iterations if it["events"]]
|
||||
@@ -1,7 +1,7 @@
|
||||
import hashlib
|
||||
from collections import defaultdict
|
||||
from contextlib import closing
|
||||
from datetime import datetime
|
||||
from enum import Enum
|
||||
from operator import attrgetter
|
||||
from typing import Sequence
|
||||
|
||||
@@ -14,42 +14,39 @@ from nested_dict import nested_dict
|
||||
import database.utils as dbutils
|
||||
import es_factory
|
||||
from apierrors import errors
|
||||
from bll.event.event_metrics import EventMetrics
|
||||
from bll.event.debug_images_iterator import DebugImagesIterator
|
||||
from bll.event.event_metrics import EventMetrics, EventType
|
||||
from bll.task import TaskBLL
|
||||
from config import config
|
||||
from database.errors import translate_errors_context
|
||||
from database.model.task.task import Task, TaskStatus
|
||||
from redis_manager import redman
|
||||
from timing_context import TimingContext
|
||||
from utilities.dicts import flatten_nested_items
|
||||
|
||||
|
||||
class EventType(Enum):
|
||||
metrics_scalar = "training_stats_scalar"
|
||||
metrics_vector = "training_stats_vector"
|
||||
metrics_image = "training_debug_image"
|
||||
metrics_plot = "plot"
|
||||
task_log = "log"
|
||||
|
||||
|
||||
# noinspection PyTypeChecker
|
||||
EVENT_TYPES = set(map(attrgetter("value"), EventType))
|
||||
|
||||
|
||||
LOCKED_TASK_STATUSES = (TaskStatus.publishing, TaskStatus.published)
|
||||
|
||||
|
||||
@attr.s
|
||||
@attr.s(auto_attribs=True)
|
||||
class TaskEventsResult(object):
|
||||
events = attr.ib(type=list, default=attr.Factory(list))
|
||||
total_events = attr.ib(type=int, default=0)
|
||||
next_scroll_id = attr.ib(type=str, default=None)
|
||||
total_events: int = 0
|
||||
next_scroll_id: str = None
|
||||
events: list = attr.ib(factory=list)
|
||||
|
||||
|
||||
class EventBLL(object):
|
||||
id_fields = ["task", "iter", "metric", "variant", "key"]
|
||||
id_fields = ("task", "iter", "metric", "variant", "key")
|
||||
|
||||
def __init__(self, events_es=None):
|
||||
def __init__(self, events_es=None, redis=None):
|
||||
self.es = events_es or es_factory.connect("events")
|
||||
self._metrics = EventMetrics(self.es)
|
||||
self._skip_iteration_for_metric = set(
|
||||
config.get("services.events.ignore_iteration.metrics", [])
|
||||
)
|
||||
self.redis = redis or redman.connection("apiserver")
|
||||
self.debug_images_iterator = DebugImagesIterator(es=self.es, redis=self.redis)
|
||||
|
||||
@property
|
||||
def metrics(self) -> EventMetrics:
|
||||
@@ -59,9 +56,12 @@ class EventBLL(object):
|
||||
actions = []
|
||||
task_ids = set()
|
||||
task_iteration = defaultdict(lambda: 0)
|
||||
task_last_events = nested_dict(
|
||||
task_last_scalar_events = nested_dict(
|
||||
3, dict
|
||||
) # task_id -> metric_hash -> variant_hash -> MetricEvent
|
||||
task_last_events = nested_dict(
|
||||
3, dict
|
||||
) # task_id -> metric_hash -> event_type -> MetricEvent
|
||||
|
||||
for event in events:
|
||||
# remove spaces from event type
|
||||
@@ -103,6 +103,9 @@ class EventBLL(object):
|
||||
event["value"] = event["values"]
|
||||
del event["values"]
|
||||
|
||||
event["metric"] = event.get("metric") or ""
|
||||
event["variant"] = event.get("variant") or ""
|
||||
|
||||
index_name = EventMetrics.get_index_name(company_id, event_type)
|
||||
es_action = {
|
||||
"_op_type": "index", # overwrite if exists with same ID
|
||||
@@ -121,12 +124,18 @@ class EventBLL(object):
|
||||
if task_id is not None:
|
||||
es_action["_routing"] = task_id
|
||||
task_ids.add(task_id)
|
||||
if iter is not None:
|
||||
if (
|
||||
iter is not None
|
||||
and event.get("metric") not in self._skip_iteration_for_metric
|
||||
):
|
||||
task_iteration[task_id] = max(iter, task_iteration[task_id])
|
||||
|
||||
self._update_last_metric_events_for_task(
|
||||
last_events=task_last_events[task_id], event=event,
|
||||
)
|
||||
if event_type == EventType.metrics_scalar.value:
|
||||
self._update_last_metric_event_for_task(
|
||||
task_last_events=task_last_events, task_id=task_id, event=event
|
||||
self._update_last_scalar_events_for_task(
|
||||
last_events=task_last_scalar_events[task_id], event=event
|
||||
)
|
||||
else:
|
||||
es_action["_routing"] = task_id
|
||||
@@ -179,6 +188,7 @@ class EventBLL(object):
|
||||
task_id=task_id,
|
||||
now=now,
|
||||
iter_max=task_iteration.get(task_id),
|
||||
last_scalar_events=task_last_scalar_events.get(task_id),
|
||||
last_events=task_last_events.get(task_id),
|
||||
)
|
||||
|
||||
@@ -194,12 +204,12 @@ class EventBLL(object):
|
||||
|
||||
return added, errors_in_bulk
|
||||
|
||||
def _update_last_metric_event_for_task(self, task_last_events, task_id, event):
|
||||
def _update_last_scalar_events_for_task(self, last_events, event):
|
||||
"""
|
||||
Update task_last_events structure for the provided task_id with the provided event details if this event is more
|
||||
Update last_events structure with the provided event details if this event is more
|
||||
recent than the currently stored event for its metric/variant combination.
|
||||
|
||||
task_last_events contains [hashed_metric_name -> hashed_variant_name -> event]. Keys are hashed to avoid mongodb
|
||||
last_events contains [hashed_metric_name -> hashed_variant_name -> event]. Keys are hashed to avoid mongodb
|
||||
key conflicts due to invalid characters and/or long field names.
|
||||
"""
|
||||
metric = event.get("metric")
|
||||
@@ -210,13 +220,34 @@ class EventBLL(object):
|
||||
metric_hash = dbutils.hash_field_name(metric)
|
||||
variant_hash = dbutils.hash_field_name(variant)
|
||||
|
||||
last_events = task_last_events[task_id]
|
||||
|
||||
timestamp = last_events[metric_hash][variant_hash].get("timestamp", None)
|
||||
if timestamp is None or timestamp < event["timestamp"]:
|
||||
last_events[metric_hash][variant_hash] = event
|
||||
|
||||
def _update_task(self, company_id, task_id, now, iter_max=None, last_events=None):
|
||||
def _update_last_metric_events_for_task(self, last_events, event):
|
||||
"""
|
||||
Update last_events structure with the provided event details if this event is more
|
||||
recent than the currently stored event for its metric/event_type combination.
|
||||
last_events contains [metric_name -> event_type -> event]
|
||||
"""
|
||||
metric = event.get("metric")
|
||||
event_type = event.get("type")
|
||||
if not (metric and event_type):
|
||||
return
|
||||
|
||||
timestamp = last_events[metric][event_type].get("timestamp", None)
|
||||
if timestamp is None or timestamp < event["timestamp"]:
|
||||
last_events[metric][event_type] = event
|
||||
|
||||
def _update_task(
|
||||
self,
|
||||
company_id,
|
||||
task_id,
|
||||
now,
|
||||
iter_max=None,
|
||||
last_scalar_events=None,
|
||||
last_events=None,
|
||||
):
|
||||
"""
|
||||
Update task information in DB with aggregated results after handling event(s) related to this task.
|
||||
|
||||
@@ -229,15 +260,18 @@ class EventBLL(object):
|
||||
if iter_max is not None:
|
||||
fields["last_iteration_max"] = iter_max
|
||||
|
||||
if last_events:
|
||||
fields["last_values"] = list(
|
||||
if last_scalar_events:
|
||||
fields["last_scalar_values"] = list(
|
||||
flatten_nested_items(
|
||||
last_events,
|
||||
last_scalar_events,
|
||||
nesting=2,
|
||||
include_leaves=["value", "metric", "variant"],
|
||||
)
|
||||
)
|
||||
|
||||
if last_events:
|
||||
fields["last_events"] = last_events
|
||||
|
||||
if not fields:
|
||||
return False
|
||||
|
||||
@@ -245,7 +279,7 @@ class EventBLL(object):
|
||||
|
||||
def _get_event_id(self, event):
|
||||
id_values = (str(event[field]) for field in self.id_fields if field in event)
|
||||
return "-".join(id_values)
|
||||
return hashlib.md5("-".join(id_values).encode()).hexdigest()
|
||||
|
||||
def scroll_task_events(
|
||||
self,
|
||||
@@ -276,7 +310,9 @@ class EventBLL(object):
|
||||
}
|
||||
|
||||
with translate_errors_context(), TimingContext("es", "scroll_task_events"):
|
||||
es_res = self.es.search(index=es_index, body=es_req, scroll="1h")
|
||||
es_res = self.es.search(
|
||||
index=es_index, body=es_req, scroll="1h", routing=task_id
|
||||
)
|
||||
|
||||
events = [hit["_source"] for hit in es_res["hits"]["hits"]]
|
||||
next_scroll_id = es_res["_scroll_id"]
|
||||
@@ -294,10 +330,16 @@ class EventBLL(object):
|
||||
"size": 0,
|
||||
"aggs": {
|
||||
"metrics": {
|
||||
"terms": {"field": "metric"},
|
||||
"terms": {
|
||||
"field": "metric",
|
||||
"size": EventMetrics.MAX_METRICS_COUNT,
|
||||
},
|
||||
"aggs": {
|
||||
"variants": {
|
||||
"terms": {"field": "variant"},
|
||||
"terms": {
|
||||
"field": "variant",
|
||||
"size": EventMetrics.MAX_VARIANTS_COUNT,
|
||||
},
|
||||
"aggs": {
|
||||
"iters": {
|
||||
"terms": {
|
||||
@@ -496,8 +538,18 @@ class EventBLL(object):
|
||||
"size": 0,
|
||||
"aggs": {
|
||||
"metrics": {
|
||||
"terms": {"field": "metric", "size": 200},
|
||||
"aggs": {"variants": {"terms": {"field": "variant", "size": 200}}},
|
||||
"terms": {
|
||||
"field": "metric",
|
||||
"size": EventMetrics.MAX_METRICS_COUNT,
|
||||
},
|
||||
"aggs": {
|
||||
"variants": {
|
||||
"terms": {
|
||||
"field": "variant",
|
||||
"size": EventMetrics.MAX_VARIANTS_COUNT,
|
||||
}
|
||||
}
|
||||
},
|
||||
}
|
||||
},
|
||||
"query": {"bool": {"must": [{"term": {"task": task_id}}]}},
|
||||
@@ -537,14 +589,14 @@ class EventBLL(object):
|
||||
"metrics": {
|
||||
"terms": {
|
||||
"field": "metric",
|
||||
"size": 1000,
|
||||
"size": EventMetrics.MAX_METRICS_COUNT,
|
||||
"order": {"_term": "asc"},
|
||||
},
|
||||
"aggs": {
|
||||
"variants": {
|
||||
"terms": {
|
||||
"field": "variant",
|
||||
"size": 1000,
|
||||
"size": EventMetrics.MAX_VARIANTS_COUNT,
|
||||
"order": {"_term": "asc"},
|
||||
},
|
||||
"aggs": {
|
||||
|
||||
@@ -1,12 +1,13 @@
|
||||
import itertools
|
||||
from collections import defaultdict
|
||||
from concurrent.futures import ThreadPoolExecutor
|
||||
from enum import Enum
|
||||
from functools import partial
|
||||
from operator import itemgetter
|
||||
from typing import Sequence, Tuple, Callable, Iterable
|
||||
|
||||
from boltons.iterutils import bucketize
|
||||
from elasticsearch import Elasticsearch
|
||||
from typing import Sequence, Tuple, Callable
|
||||
|
||||
from mongoengine import Q
|
||||
|
||||
from apierrors import errors
|
||||
@@ -20,10 +21,19 @@ from utilities import safe_get
|
||||
log = config.logger(__file__)
|
||||
|
||||
|
||||
class EventType(Enum):
|
||||
metrics_scalar = "training_stats_scalar"
|
||||
metrics_vector = "training_stats_vector"
|
||||
metrics_image = "training_debug_image"
|
||||
metrics_plot = "plot"
|
||||
task_log = "log"
|
||||
|
||||
|
||||
class EventMetrics:
|
||||
MAX_TASKS_COUNT = 100
|
||||
MAX_TASKS_COUNT = 50
|
||||
MAX_METRICS_COUNT = 200
|
||||
MAX_VARIANTS_COUNT = 500
|
||||
MAX_AGGS_ELEMENTS_COUNT = 50
|
||||
|
||||
def __init__(self, es: Elasticsearch):
|
||||
self.es = es
|
||||
@@ -62,6 +72,12 @@ class EventMetrics:
|
||||
Compare scalar metrics for different tasks per metric and variant
|
||||
The amount of points in each histogram should not exceed the requested samples
|
||||
"""
|
||||
if len(task_ids) > self.MAX_TASKS_COUNT:
|
||||
raise errors.BadRequest(
|
||||
f"Up to {self.MAX_TASKS_COUNT} tasks supported for comparison",
|
||||
len(task_ids),
|
||||
)
|
||||
|
||||
task_name_by_id = {}
|
||||
with translate_errors_context():
|
||||
task_objs = Task.get_many(
|
||||
@@ -97,6 +113,31 @@ class EventMetrics:
|
||||
MetricInterval = Tuple[int, Sequence[TaskMetric]]
|
||||
MetricData = Tuple[str, dict]
|
||||
|
||||
def _split_metrics_by_max_aggs_count(
|
||||
self, task_metrics: Sequence[TaskMetric]
|
||||
) -> Iterable[Sequence[TaskMetric]]:
|
||||
"""
|
||||
Return task metrics in groups where amount of task metrics in each group
|
||||
is roughly limited by MAX_AGGS_ELEMENTS_COUNT. The split is done on metrics and
|
||||
variants while always preserving all their tasks in the same group
|
||||
"""
|
||||
if len(task_metrics) < self.MAX_AGGS_ELEMENTS_COUNT:
|
||||
yield task_metrics
|
||||
return
|
||||
|
||||
tm_grouped = bucketize(task_metrics, key=itemgetter(1, 2))
|
||||
groups = []
|
||||
for group in tm_grouped.values():
|
||||
groups.append(group)
|
||||
if sum(map(len, groups)) >= self.MAX_AGGS_ELEMENTS_COUNT:
|
||||
yield list(itertools.chain(*groups))
|
||||
groups = []
|
||||
|
||||
if groups:
|
||||
yield list(itertools.chain(*groups))
|
||||
|
||||
return
|
||||
|
||||
def _run_get_scalar_metrics_as_parallel(
|
||||
self,
|
||||
company_id: str,
|
||||
@@ -126,21 +167,25 @@ class EventMetrics:
|
||||
if not intervals:
|
||||
return {}
|
||||
|
||||
with ThreadPoolExecutor(len(intervals)) as pool:
|
||||
metrics = list(
|
||||
itertools.chain.from_iterable(
|
||||
pool.map(
|
||||
partial(
|
||||
get_func, task_ids=task_ids, es_index=es_index, key=key
|
||||
),
|
||||
intervals,
|
||||
)
|
||||
intervals = list(
|
||||
itertools.chain.from_iterable(
|
||||
zip(itertools.repeat(i), self._split_metrics_by_max_aggs_count(tms))
|
||||
for i, tms in intervals
|
||||
)
|
||||
)
|
||||
max_concurrency = config.get("services.events.max_metrics_concurrency", 4)
|
||||
with ThreadPoolExecutor(max_workers=max_concurrency) as pool:
|
||||
metrics = itertools.chain.from_iterable(
|
||||
pool.map(
|
||||
partial(get_func, task_ids=task_ids, es_index=es_index, key=key),
|
||||
intervals,
|
||||
)
|
||||
)
|
||||
|
||||
ret = defaultdict(dict)
|
||||
for metric_key, metric_values in metrics:
|
||||
ret[metric_key].update(metric_values)
|
||||
|
||||
return ret
|
||||
|
||||
def _get_metric_intervals(
|
||||
@@ -310,7 +355,13 @@ class EventMetrics:
|
||||
"variants": {
|
||||
"terms": {"field": "variant", "size": self.MAX_VARIANTS_COUNT},
|
||||
"aggs": {
|
||||
"tasks": {"terms": {"field": "task"}, "aggs": aggregation}
|
||||
"tasks": {
|
||||
"terms": {
|
||||
"field": "task",
|
||||
"size": self.MAX_TASKS_COUNT,
|
||||
},
|
||||
"aggs": aggregation,
|
||||
}
|
||||
},
|
||||
}
|
||||
},
|
||||
@@ -396,3 +447,50 @@ class EventMetrics:
|
||||
]
|
||||
}
|
||||
}
|
||||
|
||||
def get_tasks_metrics(
|
||||
self, company_id, task_ids: Sequence, event_type: EventType
|
||||
) -> Sequence[Tuple]:
|
||||
"""
|
||||
For the requested tasks return all the metrics that
|
||||
reported events of the requested types
|
||||
"""
|
||||
es_index = EventMetrics.get_index_name(company_id, event_type.value)
|
||||
if not self.es.indices.exists(es_index):
|
||||
return [(tid, []) for tid in task_ids]
|
||||
|
||||
max_concurrency = config.get("services.events.max_metrics_concurrency", 4)
|
||||
with ThreadPoolExecutor(max_concurrency) as pool:
|
||||
res = pool.map(
|
||||
partial(
|
||||
self._get_task_metrics, es_index=es_index, event_type=event_type,
|
||||
),
|
||||
task_ids,
|
||||
)
|
||||
return list(zip(task_ids, res))
|
||||
|
||||
def _get_task_metrics(self, task_id, es_index, event_type: EventType) -> Sequence:
|
||||
es_req = {
|
||||
"size": 0,
|
||||
"query": {
|
||||
"bool": {
|
||||
"must": [
|
||||
{"term": {"task": task_id}},
|
||||
{"term": {"type": event_type.value}},
|
||||
]
|
||||
}
|
||||
},
|
||||
"aggs": {
|
||||
"metrics": {
|
||||
"terms": {"field": "metric", "size": self.MAX_METRICS_COUNT}
|
||||
}
|
||||
},
|
||||
}
|
||||
|
||||
with translate_errors_context(), TimingContext("es", "_get_task_metrics"):
|
||||
es_res = self.es.search(index=es_index, body=es_req, routing=task_id)
|
||||
|
||||
return [
|
||||
metric["key"]
|
||||
for metric in safe_get(es_res, "aggregations/metrics/buckets", default=[])
|
||||
]
|
||||
|
||||
@@ -111,7 +111,7 @@ class TimestampKey(ScalarKey):
|
||||
self.name: {
|
||||
"date_histogram": {
|
||||
"field": "timestamp",
|
||||
"interval": interval,
|
||||
"interval": f"{interval}ms",
|
||||
"min_doc_count": 1,
|
||||
}
|
||||
}
|
||||
@@ -150,7 +150,7 @@ class ISOTimeKey(ScalarKey):
|
||||
self.name: {
|
||||
"date_histogram": {
|
||||
"field": "timestamp",
|
||||
"interval": interval,
|
||||
"interval": f"{interval}ms",
|
||||
"min_doc_count": 1,
|
||||
"format": "strict_date_time",
|
||||
}
|
||||
|
||||
@@ -9,9 +9,12 @@ import es_factory
|
||||
from apierrors import errors
|
||||
from bll.queue.queue_metrics import QueueMetrics
|
||||
from bll.workers import WorkerBLL
|
||||
from config import config
|
||||
from database.errors import translate_errors_context
|
||||
from database.model.queue import Queue, Entry
|
||||
|
||||
log = config.logger(__file__)
|
||||
|
||||
|
||||
class QueueBLL(object):
|
||||
def __init__(self, worker_bll: WorkerBLL = None, es: Elasticsearch = None):
|
||||
@@ -189,9 +192,7 @@ class QueueBLL(object):
|
||||
"""
|
||||
with translate_errors_context():
|
||||
query = dict(id=queue_id, company=company_id)
|
||||
queue = Queue.objects(**query).modify(
|
||||
pop__entries=-1, last_update=datetime.utcnow(), upsert=False
|
||||
)
|
||||
queue = Queue.objects(**query).modify(pop__entries=-1, upsert=False)
|
||||
if not queue:
|
||||
raise errors.bad_request.InvalidQueueId(**query)
|
||||
|
||||
@@ -200,6 +201,11 @@ class QueueBLL(object):
|
||||
if not queue.entries:
|
||||
return
|
||||
|
||||
try:
|
||||
Queue.objects(**query).update(last_update=datetime.utcnow())
|
||||
except Exception:
|
||||
log.exception("Error while updating Queue.last_update")
|
||||
|
||||
return queue.entries[0]
|
||||
|
||||
def remove_task(self, company_id: str, queue_id: str, task_id: str) -> int:
|
||||
|
||||
44
server/bll/redis_cache_manager.py
Normal file
44
server/bll/redis_cache_manager.py
Normal file
@@ -0,0 +1,44 @@
|
||||
from typing import Optional, TypeVar, Generic, Type
|
||||
|
||||
from redis import StrictRedis
|
||||
|
||||
from timing_context import TimingContext
|
||||
|
||||
T = TypeVar("T")
|
||||
|
||||
|
||||
class RedisCacheManager(Generic[T]):
|
||||
"""
|
||||
Class for store/retreive of state objects from redis
|
||||
|
||||
self.state_class - class of the state
|
||||
self.redis - instance of redis
|
||||
self.expiration_interval - expiration interval in seconds
|
||||
"""
|
||||
|
||||
def __init__(
|
||||
self, state_class: Type[T], redis: StrictRedis, expiration_interval: int
|
||||
):
|
||||
self.state_class = state_class
|
||||
self.redis = redis
|
||||
self.expiration_interval = expiration_interval
|
||||
|
||||
def set_state(self, state: T) -> None:
|
||||
redis_key = self._get_redis_key(state.id)
|
||||
with TimingContext("redis", "cache_set_state"):
|
||||
self.redis.set(redis_key, state.to_json())
|
||||
self.redis.expire(redis_key, self.expiration_interval)
|
||||
|
||||
def get_state(self, state_id) -> Optional[T]:
|
||||
redis_key = self._get_redis_key(state_id)
|
||||
with TimingContext("redis", "cache_get_state"):
|
||||
response = self.redis.get(redis_key)
|
||||
if response:
|
||||
return self.state_class.from_json(response)
|
||||
|
||||
def delete_state(self, state_id) -> None:
|
||||
with TimingContext("redis", "cache_delete_state"):
|
||||
self.redis.delete(self._get_redis_key(state_id))
|
||||
|
||||
def _get_redis_key(self, state_id):
|
||||
return f"{self.state_class}/{state_id}"
|
||||
@@ -6,6 +6,8 @@ from time import sleep
|
||||
import attr
|
||||
import psutil
|
||||
|
||||
from utilities.threads_manager import ThreadsManager
|
||||
|
||||
|
||||
class ResourceMonitor(Thread):
|
||||
@attr.s(auto_attribs=True)
|
||||
@@ -58,7 +60,9 @@ class ResourceMonitor(Thread):
|
||||
)
|
||||
|
||||
def run(self):
|
||||
while True:
|
||||
while not ThreadsManager.terminating:
|
||||
sleep(self.sample_interval_sec)
|
||||
|
||||
sample = self._get_sample()
|
||||
|
||||
with self._lock:
|
||||
@@ -67,21 +71,20 @@ class ResourceMonitor(Thread):
|
||||
self._avg = self._avg.avg(sample, self._count)
|
||||
self._count += 1
|
||||
|
||||
sleep(self.sample_interval_sec)
|
||||
|
||||
def get_stats(self) -> dict:
|
||||
""" Returns current resource statistics and clears internal resource statistics """
|
||||
with self._lock:
|
||||
min_ = attr.asdict(self._min)
|
||||
max_ = attr.asdict(self._max)
|
||||
avg = attr.asdict(self._avg)
|
||||
res = {
|
||||
"interval_sec": (datetime.utcnow() - self._clear_time).total_seconds(),
|
||||
"num_cores": psutil.cpu_count(),
|
||||
**{
|
||||
k: {"min": v, "max": max_[k], "avg": avg[k]}
|
||||
for k, v in min_.items()
|
||||
}
|
||||
}
|
||||
interval = datetime.utcnow() - self._clear_time
|
||||
self._clear()
|
||||
return res
|
||||
|
||||
return {
|
||||
"interval_sec": interval.total_seconds(),
|
||||
"num_cores": psutil.cpu_count(),
|
||||
**{
|
||||
k: {"min": v, "max": max_[k], "avg": avg[k]}
|
||||
for k, v in min_.items()
|
||||
}
|
||||
}
|
||||
|
||||
@@ -53,11 +53,8 @@ class StatisticsReporter:
|
||||
report_interval = timedelta(
|
||||
hours=config.get("apiserver.statistics.report_interval_hours", 24)
|
||||
)
|
||||
|
||||
while True:
|
||||
|
||||
sleep(report_interval.total_seconds())
|
||||
|
||||
sleep(report_interval.total_seconds())
|
||||
while not ThreadsManager.terminating:
|
||||
try:
|
||||
for company in Company.objects(
|
||||
defaults__stats_option__enabled=True
|
||||
@@ -68,6 +65,8 @@ class StatisticsReporter:
|
||||
except Exception as ex:
|
||||
log.exception(f"Failed collecting stats: {str(ex)}")
|
||||
|
||||
sleep(report_interval.total_seconds())
|
||||
|
||||
@classmethod
|
||||
@threads.register("sender", daemon=True)
|
||||
def start_sender(cls):
|
||||
@@ -86,7 +85,7 @@ class StatisticsReporter:
|
||||
|
||||
WarningFilter.attach()
|
||||
|
||||
while True:
|
||||
while not ThreadsManager.terminating:
|
||||
try:
|
||||
report = cls.send_queue.get()
|
||||
|
||||
|
||||
@@ -4,4 +4,5 @@ from .utils import (
|
||||
update_project_time,
|
||||
validate_status_change,
|
||||
split_by,
|
||||
ParameterKeyEscaper,
|
||||
)
|
||||
|
||||
@@ -1,31 +1,41 @@
|
||||
import re
|
||||
from collections import OrderedDict
|
||||
from datetime import datetime, timedelta
|
||||
from operator import attrgetter
|
||||
from random import random
|
||||
from time import sleep
|
||||
from typing import Collection, Sequence, Tuple, Any
|
||||
from typing import Collection, Sequence, Tuple, Any, Optional, List, Dict
|
||||
|
||||
import pymongo.results
|
||||
import six
|
||||
from mongoengine import Q
|
||||
from six import string_types
|
||||
|
||||
import database.utils as dbutils
|
||||
import es_factory
|
||||
from apierrors import errors
|
||||
from apimodels.tasks import Artifact as ApiArtifact
|
||||
from config import config
|
||||
from database.errors import translate_errors_context
|
||||
from database.model.model import Model
|
||||
from database.model.project import Project
|
||||
from database.model.task.metrics import EventStats, MetricEventStats
|
||||
from database.model.task.output import Output
|
||||
from database.model.task.task import (
|
||||
Task,
|
||||
TaskStatus,
|
||||
TaskStatusMessage,
|
||||
TaskSystemTags,
|
||||
ArtifactModes,
|
||||
Artifact,
|
||||
)
|
||||
from database.utils import get_company_or_none_constraint, id as create_id
|
||||
from service_repo import APICall
|
||||
from timing_context import TimingContext
|
||||
from utilities.dicts import deep_merge
|
||||
from utilities.threads_manager import ThreadsManager
|
||||
from .utils import ChangeStatusRequest, validate_status_change
|
||||
from .utils import ChangeStatusRequest, validate_status_change, ParameterKeyEscaper
|
||||
|
||||
log = config.logger(__file__)
|
||||
|
||||
|
||||
class TaskBLL(object):
|
||||
@@ -144,6 +154,61 @@ class TaskBLL(object):
|
||||
|
||||
return model
|
||||
|
||||
@classmethod
|
||||
def clone_task(
|
||||
cls,
|
||||
company_id,
|
||||
user_id,
|
||||
task_id,
|
||||
name: Optional[str] = None,
|
||||
comment: Optional[str] = None,
|
||||
parent: Optional[str] = None,
|
||||
project: Optional[str] = None,
|
||||
tags: Optional[Sequence[str]] = None,
|
||||
system_tags: Optional[Sequence[str]] = None,
|
||||
execution_overrides: Optional[dict] = None,
|
||||
) -> Task:
|
||||
task = cls.get_by_id(company_id=company_id, task_id=task_id)
|
||||
execution_dict = task.execution.to_proper_dict() if task.execution else {}
|
||||
if execution_overrides:
|
||||
parameters = execution_overrides.get("parameters")
|
||||
if parameters is not None:
|
||||
execution_overrides["parameters"] = {
|
||||
ParameterKeyEscaper.escape(k): v for k, v in parameters.items()
|
||||
}
|
||||
execution_dict = deep_merge(execution_dict, execution_overrides)
|
||||
artifacts = execution_dict.get("artifacts")
|
||||
if artifacts:
|
||||
execution_dict["artifacts"] = [
|
||||
a for a in artifacts if a.get("mode") != ArtifactModes.output
|
||||
]
|
||||
now = datetime.utcnow()
|
||||
|
||||
with translate_errors_context():
|
||||
new_task = Task(
|
||||
id=create_id(),
|
||||
user=user_id,
|
||||
company=company_id,
|
||||
created=now,
|
||||
last_update=now,
|
||||
name=name or task.name,
|
||||
comment=comment or task.comment,
|
||||
parent=parent or task.parent,
|
||||
project=project or task.project,
|
||||
tags=tags or task.tags,
|
||||
system_tags=system_tags or [],
|
||||
type=task.type,
|
||||
script=task.script,
|
||||
output=Output(destination=task.output.destination)
|
||||
if task.output
|
||||
else None,
|
||||
execution=execution_dict,
|
||||
)
|
||||
cls.validate(new_task)
|
||||
new_task.save()
|
||||
|
||||
return new_task
|
||||
|
||||
@classmethod
|
||||
def validate(cls, task: Task):
|
||||
assert isinstance(task, Task)
|
||||
@@ -153,23 +218,13 @@ class TaskBLL(object):
|
||||
):
|
||||
raise errors.bad_request.InvalidTaskId("invalid parent", parent=task.parent)
|
||||
|
||||
if task.project:
|
||||
Project.get_for_writing(company=task.company, id=task.project)
|
||||
if task.project and not Project.get_for_writing(
|
||||
company=task.company, id=task.project
|
||||
):
|
||||
raise errors.bad_request.InvalidProjectId(id=task.project)
|
||||
|
||||
cls.validate_execution_model(task)
|
||||
|
||||
if task.execution:
|
||||
if task.execution.parameters:
|
||||
cls._validate_execution_parameters(task.execution.parameters)
|
||||
|
||||
@staticmethod
|
||||
def _validate_execution_parameters(parameters):
|
||||
invalid_keys = [k for k in parameters if re.search(r"\s", k)]
|
||||
if invalid_keys:
|
||||
raise errors.bad_request.ValidationError(
|
||||
"execution.parameters keys contain whitespace", keys=invalid_keys
|
||||
)
|
||||
|
||||
@staticmethod
|
||||
def get_unique_metric_variants(company_id, project_ids=None):
|
||||
pipeline = [
|
||||
@@ -226,7 +281,8 @@ class TaskBLL(object):
|
||||
last_update: datetime = None,
|
||||
last_iteration: int = None,
|
||||
last_iteration_max: int = None,
|
||||
last_values: Sequence[Tuple[Tuple[str, ...], Any]] = None,
|
||||
last_scalar_values: Sequence[Tuple[Tuple[str, ...], Any]] = None,
|
||||
last_events: Dict[str, Dict[str, dict]] = None,
|
||||
**extra_updates,
|
||||
):
|
||||
"""
|
||||
@@ -238,7 +294,8 @@ class TaskBLL(object):
|
||||
task's last iteration value.
|
||||
:param last_iteration_max: Last reported iteration. Use this to conditionally set a value only
|
||||
if the current task's last iteration value is smaller than the provided value.
|
||||
:param last_values: Last reported metrics summary (value, metric, variant).
|
||||
:param last_scalar_values: Last reported metrics summary for scalar events (value, metric, variant).
|
||||
:param last_events: Last reported metrics summary (value, metric, event type).
|
||||
:param extra_updates: Extra task updates to include in this update call.
|
||||
:return:
|
||||
"""
|
||||
@@ -249,17 +306,33 @@ class TaskBLL(object):
|
||||
elif last_iteration_max is not None:
|
||||
extra_updates.update(max__last_iteration=last_iteration_max)
|
||||
|
||||
if last_values is not None:
|
||||
if last_scalar_values is not None:
|
||||
|
||||
def op_path(op, *path):
|
||||
return "__".join((op, "last_metrics") + path)
|
||||
|
||||
for path, value in last_values:
|
||||
for path, value in last_scalar_values:
|
||||
extra_updates[op_path("set", *path)] = value
|
||||
if path[-1] == "value":
|
||||
extra_updates[op_path("min", *path[:-1], "min_value")] = value
|
||||
extra_updates[op_path("max", *path[:-1], "max_value")] = value
|
||||
|
||||
if last_events is not None:
|
||||
|
||||
def events_per_type(metric_data: Dict[str, dict]) -> Dict[str, EventStats]:
|
||||
return {
|
||||
event_type: EventStats(last_update=event["timestamp"])
|
||||
for event_type, event in metric_data.items()
|
||||
}
|
||||
|
||||
metric_stats = {
|
||||
dbutils.hash_field_name(metric_key): MetricEventStats(
|
||||
metric=metric_key, event_stats_by_type=events_per_type(metric_data),
|
||||
)
|
||||
for metric_key, metric_data in last_events.items()
|
||||
}
|
||||
extra_updates["metric_stats"] = metric_stats
|
||||
|
||||
Task.objects(id=task_id, company=company_id).update(
|
||||
upsert=False, last_update=last_update, **extra_updates
|
||||
)
|
||||
@@ -373,7 +446,7 @@ class TaskBLL(object):
|
||||
:return: updated task fields
|
||||
"""
|
||||
|
||||
task = TaskBLL.get_task_with_access(
|
||||
task = cls.get_task_with_access(
|
||||
task_id,
|
||||
company_id=company_id,
|
||||
only=(
|
||||
@@ -411,6 +484,97 @@ class TaskBLL(object):
|
||||
force=force,
|
||||
).execute()
|
||||
|
||||
@classmethod
|
||||
def add_or_update_artifacts(
|
||||
cls, task_id: str, company_id: str, artifacts: List[ApiArtifact]
|
||||
) -> Tuple[List[str], List[str]]:
|
||||
key = attrgetter("key", "mode")
|
||||
|
||||
if not artifacts:
|
||||
return [], []
|
||||
|
||||
with translate_errors_context(), TimingContext("mongo", "update_artifacts"):
|
||||
artifacts: List[Artifact] = [
|
||||
Artifact(**artifact.to_struct()) for artifact in artifacts
|
||||
]
|
||||
|
||||
attempts = int(config.get("services.tasks.artifacts.update_attempts", 10))
|
||||
|
||||
for retry in range(attempts):
|
||||
task = cls.get_task_with_access(
|
||||
task_id, company_id=company_id, requires_write_access=True
|
||||
)
|
||||
|
||||
current = list(map(key, task.execution.artifacts))
|
||||
updated = [a for a in artifacts if key(a) in current]
|
||||
added = [a for a in artifacts if a not in updated]
|
||||
|
||||
filter = {"_id": task_id, "company": company_id}
|
||||
update = {}
|
||||
array_filters = None
|
||||
if current:
|
||||
filter["execution.artifacts"] = {
|
||||
"$size": len(current),
|
||||
"$all": [
|
||||
*(
|
||||
{"$elemMatch": {"key": key, "mode": mode}}
|
||||
for key, mode in current
|
||||
)
|
||||
],
|
||||
}
|
||||
else:
|
||||
filter["$or"] = [
|
||||
{"execution.artifacts": {"$exists": False}},
|
||||
{"execution.artifacts": {"$size": 0}},
|
||||
]
|
||||
|
||||
if added:
|
||||
update["$push"] = {
|
||||
"execution.artifacts": {"$each": [a.to_mongo() for a in added]}
|
||||
}
|
||||
if updated:
|
||||
update["$set"] = {
|
||||
f"execution.artifacts.$[artifact{index}]": artifact.to_mongo()
|
||||
for index, artifact in enumerate(updated)
|
||||
}
|
||||
array_filters = [
|
||||
{
|
||||
f"artifact{index}.key": artifact.key,
|
||||
f"artifact{index}.mode": artifact.mode,
|
||||
}
|
||||
for index, artifact in enumerate(updated)
|
||||
]
|
||||
|
||||
if not update:
|
||||
return [], []
|
||||
|
||||
result: pymongo.results.UpdateResult = Task._get_collection().update_one(
|
||||
filter=filter,
|
||||
update=update,
|
||||
array_filters=array_filters,
|
||||
upsert=False,
|
||||
)
|
||||
|
||||
if result.matched_count >= 1:
|
||||
break
|
||||
|
||||
wait_msec = random() * int(
|
||||
config.get("services.tasks.artifacts.update_retry_msec", 500)
|
||||
)
|
||||
|
||||
log.warning(
|
||||
f"Failed to update artifacts for task {task_id} (updated by another party),"
|
||||
f" retrying {retry+1}/{attempts} in {wait_msec}ms"
|
||||
)
|
||||
|
||||
sleep(wait_msec / 1000)
|
||||
else:
|
||||
raise errors.server_error.UpdateFailed(
|
||||
"task artifacts updated by another party"
|
||||
)
|
||||
|
||||
return [a.key for a in added], [a.key for a in updated]
|
||||
|
||||
@classmethod
|
||||
@threads.register("non_responsive_tasks_watchdog", daemon=True)
|
||||
def start_non_responsive_tasks_watchdog(cls):
|
||||
@@ -421,13 +585,11 @@ class TaskBLL(object):
|
||||
"services.tasks.non_responsive_tasks_watchdog.threshold_sec", 7200
|
||||
)
|
||||
)
|
||||
while True:
|
||||
sleep(
|
||||
config.get(
|
||||
"services.tasks.non_responsive_tasks_watchdog.watch_interval_sec",
|
||||
900,
|
||||
)
|
||||
)
|
||||
watch_interval = config.get(
|
||||
"services.tasks.non_responsive_tasks_watchdog.watch_interval_sec", 900
|
||||
)
|
||||
sleep(watch_interval)
|
||||
while not ThreadsManager.terminating:
|
||||
try:
|
||||
|
||||
ref_time = datetime.utcnow() - threshold
|
||||
@@ -463,6 +625,8 @@ class TaskBLL(object):
|
||||
except Exception as ex:
|
||||
log.exception(f"Failed stopping tasks: {str(ex)}")
|
||||
|
||||
sleep(watch_interval)
|
||||
|
||||
@staticmethod
|
||||
def get_aggregated_project_execution_parameters(
|
||||
company_id,
|
||||
@@ -502,10 +666,7 @@ class TaskBLL(object):
|
||||
]
|
||||
|
||||
with translate_errors_context():
|
||||
result = next(
|
||||
Task.aggregate(*pipeline),
|
||||
None,
|
||||
)
|
||||
result = next(Task.aggregate(*pipeline), None)
|
||||
|
||||
total = 0
|
||||
remaining = 0
|
||||
@@ -513,7 +674,10 @@ class TaskBLL(object):
|
||||
|
||||
if result:
|
||||
total = int(result.get("total", -1))
|
||||
results = [r["_id"] for r in result.get("results", [])]
|
||||
results = [
|
||||
ParameterKeyEscaper.unescape(r["_id"])
|
||||
for r in result.get("results", [])
|
||||
]
|
||||
remaining = max(0, total - (len(results) + page * page_size))
|
||||
|
||||
return total, remaining, results
|
||||
|
||||
@@ -3,6 +3,7 @@ from typing import TypeVar, Callable, Tuple, Sequence
|
||||
|
||||
import attr
|
||||
import six
|
||||
from boltons.dictutils import OneToOne
|
||||
|
||||
from apierrors import errors
|
||||
from database.errors import translate_errors_context
|
||||
@@ -171,3 +172,26 @@ def split_by(
|
||||
[item for cond, item in applied if cond],
|
||||
[item for cond, item in applied if not cond],
|
||||
)
|
||||
|
||||
|
||||
class ParameterKeyEscaper:
|
||||
_mapping = OneToOne({".": "%2E", "$": "%24"})
|
||||
|
||||
@classmethod
|
||||
def escape(cls, value):
|
||||
""" Quote a parameter key """
|
||||
value = value.strip().replace("%", "%%")
|
||||
for c, r in cls._mapping.items():
|
||||
value = value.replace(c, r)
|
||||
return value
|
||||
|
||||
@classmethod
|
||||
def _unescape(cls, value):
|
||||
for c, r in cls._mapping.inv.items():
|
||||
value = value.replace(c, r)
|
||||
return value
|
||||
|
||||
@classmethod
|
||||
def unescape(cls, value):
|
||||
""" Unquote a quoted parameter key """
|
||||
return "%".join(map(cls._unescape, value.split("%%")))
|
||||
|
||||
@@ -47,7 +47,7 @@ class BasicConfig:
|
||||
def logger(self, name):
|
||||
if Path(name).is_file():
|
||||
name = Path(name).stem
|
||||
path = ".".join((self.prefix, Path(name).stem))
|
||||
path = ".".join((self.prefix, name))
|
||||
return logging.getLogger(path)
|
||||
|
||||
def _read_extra_env_config_values(self):
|
||||
|
||||
@@ -34,6 +34,12 @@
|
||||
aggregate {
|
||||
allow_disk_use: true
|
||||
}
|
||||
|
||||
pre_populate {
|
||||
enabled: false
|
||||
zip_file: "/path/to/export.zip"
|
||||
fail_on_error: false
|
||||
}
|
||||
}
|
||||
|
||||
auth {
|
||||
|
||||
@@ -32,6 +32,11 @@ mongo {
|
||||
}
|
||||
|
||||
redis {
|
||||
apiserver {
|
||||
host: "127.0.0.1"
|
||||
port: 6379
|
||||
db: 0
|
||||
}
|
||||
workers {
|
||||
host: "127.0.0.1"
|
||||
port: 6379
|
||||
|
||||
@@ -1,3 +1,9 @@
|
||||
{
|
||||
es_index_prefix:"events"
|
||||
}
|
||||
es_index_prefix: "events"
|
||||
|
||||
ignore_iteration {
|
||||
metrics: [":monitor:machine", ":monitor:gpu"]
|
||||
}
|
||||
|
||||
# max number of concurrent queries to ES when calculating events metrics
|
||||
# should not exceed the amount of concurrent connections set in the ES driver
|
||||
max_metrics_concurrency: 4
|
||||
@@ -5,3 +5,8 @@ non_responsive_tasks_watchdog {
|
||||
# Watchdog will sleep for this number of seconds after each cycle
|
||||
watch_interval_sec: 900
|
||||
}
|
||||
|
||||
artifacts {
|
||||
update_attempts: 10
|
||||
update_retry_msec: 500
|
||||
}
|
||||
@@ -1,43 +1,43 @@
|
||||
from functools import lru_cache
|
||||
from pathlib import Path
|
||||
from os import getenv
|
||||
from pathlib import Path
|
||||
from version import __version__
|
||||
|
||||
from config import config
|
||||
|
||||
root = Path(__file__).parent.parent
|
||||
|
||||
|
||||
@lru_cache()
|
||||
def get_build_number():
|
||||
try:
|
||||
return (root / "BUILD").read_text().strip()
|
||||
except FileNotFoundError:
|
||||
return ""
|
||||
|
||||
|
||||
@lru_cache()
|
||||
def get_version():
|
||||
try:
|
||||
return (root / "VERSION").read_text().strip()
|
||||
except FileNotFoundError:
|
||||
return ""
|
||||
|
||||
|
||||
@lru_cache()
|
||||
def get_commit_number():
|
||||
try:
|
||||
return (root / "COMMIT").read_text().strip()
|
||||
except FileNotFoundError:
|
||||
return ""
|
||||
|
||||
|
||||
@lru_cache()
|
||||
def get_deployment_type() -> str:
|
||||
value = getenv("TRAINS_SERVER_DEPLOYMENT_TYPE")
|
||||
def _get(prop_name, env_suffix=None, default=""):
|
||||
value = getenv(f"TRAINS_SERVER_{env_suffix or prop_name}")
|
||||
if value:
|
||||
return value
|
||||
|
||||
try:
|
||||
value = (root / "DEPLOY").read_text().strip()
|
||||
return (root / prop_name).read_text().strip()
|
||||
except FileNotFoundError:
|
||||
pass
|
||||
return default
|
||||
|
||||
return value or "manual"
|
||||
|
||||
@lru_cache()
|
||||
def get_build_number():
|
||||
return _get("BUILD")
|
||||
|
||||
|
||||
@lru_cache()
|
||||
def get_version():
|
||||
return _get("VERSION", default=__version__)
|
||||
|
||||
|
||||
@lru_cache()
|
||||
def get_commit_number():
|
||||
return _get("COMMIT")
|
||||
|
||||
|
||||
@lru_cache()
|
||||
def get_deployment_type() -> str:
|
||||
return _get("DEPLOY", env_suffix="DEPLOYMENT_TYPE", default="manual")
|
||||
|
||||
|
||||
def get_default_company():
|
||||
return config.get("apiserver.default_company")
|
||||
|
||||
@@ -52,7 +52,7 @@ class User(DbModelMixin, AuthDocument):
|
||||
meta = {"db_alias": Database.auth, "strict": strict}
|
||||
|
||||
id = StringField(primary_key=True)
|
||||
name = StringField(unique_with="company")
|
||||
name = StringField()
|
||||
|
||||
created = DateTimeField()
|
||||
""" User auth entry creation time """
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
import re
|
||||
from collections import namedtuple
|
||||
from functools import reduce
|
||||
from typing import Collection, Sequence, Union
|
||||
from typing import Collection, Sequence, Union, Optional
|
||||
|
||||
from boltons.iterutils import first
|
||||
from dateutil.parser import parse as parse_datetime
|
||||
@@ -60,7 +60,7 @@ class ProperDictMixin(object):
|
||||
|
||||
class GetMixin(PropsMixin):
|
||||
_text_score = "$text_score"
|
||||
|
||||
_projection_key = "projection"
|
||||
_ordering_key = "order_by"
|
||||
_search_text_key = "search_text"
|
||||
|
||||
@@ -270,11 +270,26 @@ class GetMixin(PropsMixin):
|
||||
return override_projection
|
||||
if not parameters:
|
||||
return []
|
||||
return parameters.get("projection") or parameters.get("only_fields", [])
|
||||
return parameters.get(cls._projection_key) or parameters.get("only_fields", [])
|
||||
|
||||
@classmethod
|
||||
def set_default_ordering(cls, parameters, value):
|
||||
parameters[cls._ordering_key] = parameters.get(cls._ordering_key) or value
|
||||
def set_projection(cls, parameters: dict, value: Sequence[str]) -> Sequence[str]:
|
||||
parameters.pop("only_fields", None)
|
||||
parameters[cls._projection_key] = value
|
||||
return value
|
||||
|
||||
@classmethod
|
||||
def get_ordering(cls, parameters: dict) -> Optional[Sequence[str]]:
|
||||
return parameters.get(cls._ordering_key)
|
||||
|
||||
@classmethod
|
||||
def set_ordering(cls, parameters: dict, value: Sequence[str]) -> Sequence[str]:
|
||||
parameters[cls._ordering_key] = value
|
||||
return value
|
||||
|
||||
@classmethod
|
||||
def set_default_ordering(cls, parameters: dict, value: Sequence[str]) -> None:
|
||||
cls.set_ordering(parameters, cls.get_ordering(parameters) or value)
|
||||
|
||||
@classmethod
|
||||
def get_many_with_join(
|
||||
|
||||
@@ -12,35 +12,32 @@ from database.model.user import User
|
||||
|
||||
class Model(DbModelMixin, Document):
|
||||
meta = {
|
||||
'db_alias': Database.backend,
|
||||
'strict': strict,
|
||||
'indexes': [
|
||||
"db_alias": Database.backend,
|
||||
"strict": strict,
|
||||
"indexes": [
|
||||
"parent",
|
||||
"project",
|
||||
"task",
|
||||
("company", "name"),
|
||||
{
|
||||
'name': '%s.model.main_text_index' % Database.backend,
|
||||
'fields': [
|
||||
'$name',
|
||||
'$id',
|
||||
'$comment',
|
||||
'$parent',
|
||||
'$task',
|
||||
'$project',
|
||||
],
|
||||
'default_language': 'english',
|
||||
'weights': {
|
||||
'name': 10,
|
||||
'id': 10,
|
||||
'comment': 10,
|
||||
'parent': 5,
|
||||
'task': 3,
|
||||
'project': 3,
|
||||
}
|
||||
}
|
||||
"name": "%s.model.main_text_index" % Database.backend,
|
||||
"fields": ["$name", "$id", "$comment", "$parent", "$task", "$project"],
|
||||
"default_language": "english",
|
||||
"weights": {
|
||||
"name": 10,
|
||||
"id": 10,
|
||||
"comment": 10,
|
||||
"parent": 5,
|
||||
"task": 3,
|
||||
"project": 3,
|
||||
},
|
||||
},
|
||||
],
|
||||
}
|
||||
|
||||
id = StringField(primary_key=True)
|
||||
name = StrippedStringField(user_set_allowed=True, min_length=3)
|
||||
parent = StringField(reference_field='Model', required=False)
|
||||
parent = StringField(reference_field="Model", required=False)
|
||||
user = StringField(required=True, reference_field=User)
|
||||
company = StringField(required=True, reference_field=Company)
|
||||
project = StringField(reference_field=Project, user_set_allowed=True)
|
||||
@@ -49,9 +46,11 @@ class Model(DbModelMixin, Document):
|
||||
comment = StringField(user_set_allowed=True)
|
||||
tags = ListField(StringField(required=True), user_set_allowed=True)
|
||||
system_tags = ListField(StringField(required=True), user_set_allowed=True)
|
||||
uri = StrippedStringField(default='', user_set_allowed=True)
|
||||
uri = StrippedStringField(default="", user_set_allowed=True)
|
||||
framework = StringField()
|
||||
design = SafeDictField()
|
||||
labels = ModelLabels()
|
||||
ready = BooleanField(required=True)
|
||||
ui_cache = SafeDictField(default=dict, user_set_allowed=True, exclude_by_default=True)
|
||||
ui_cache = SafeDictField(
|
||||
default=dict, user_set_allowed=True, exclude_by_default=True
|
||||
)
|
||||
|
||||
@@ -17,12 +17,13 @@ class Project(AttributedDocument):
|
||||
"db_alias": Database.backend,
|
||||
"strict": strict,
|
||||
"indexes": [
|
||||
("company", "name"),
|
||||
{
|
||||
"name": "%s.project.main_text_index" % Database.backend,
|
||||
"fields": ["$name", "$id", "$description"],
|
||||
"default_language": "english",
|
||||
"weights": {"name": 10, "id": 10, "description": 10},
|
||||
}
|
||||
},
|
||||
],
|
||||
}
|
||||
|
||||
|
||||
@@ -40,10 +40,6 @@ class Settings(DbModelMixin, Document):
|
||||
""" Sets a new value or adds a new key/value setting (if key does not exist) """
|
||||
key = key.strip(sep)
|
||||
res = Settings.objects(key=key).update(key=key, value=value, upsert=True)
|
||||
# if Settings.objects(key=key).only("key"):
|
||||
#
|
||||
# else:
|
||||
# res = Settings(key=key, value=value).save()
|
||||
return bool(res)
|
||||
|
||||
@classmethod
|
||||
|
||||
@@ -1,10 +1,18 @@
|
||||
from mongoengine import EmbeddedDocument, StringField, DynamicField
|
||||
from mongoengine import (
|
||||
EmbeddedDocument,
|
||||
StringField,
|
||||
DynamicField,
|
||||
LongField,
|
||||
EmbeddedDocumentField,
|
||||
)
|
||||
|
||||
from database.fields import SafeMapField
|
||||
|
||||
|
||||
class MetricEvent(EmbeddedDocument):
|
||||
meta = {
|
||||
# For backwards compatibility reasons
|
||||
'strict': False,
|
||||
"strict": False,
|
||||
}
|
||||
|
||||
metric = StringField(required=True)
|
||||
@@ -12,3 +20,20 @@ class MetricEvent(EmbeddedDocument):
|
||||
value = DynamicField(required=True)
|
||||
min_value = DynamicField() # for backwards compatibility reasons
|
||||
max_value = DynamicField() # for backwards compatibility reasons
|
||||
|
||||
|
||||
class EventStats(EmbeddedDocument):
|
||||
meta = {
|
||||
# For backwards compatibility reasons
|
||||
"strict": False,
|
||||
}
|
||||
last_update = LongField()
|
||||
|
||||
|
||||
class MetricEventStats(EmbeddedDocument):
|
||||
meta = {
|
||||
# For backwards compatibility reasons
|
||||
"strict": False,
|
||||
}
|
||||
metric = StringField(required=True)
|
||||
event_stats_by_type = SafeMapField(field=EmbeddedDocumentField(EventStats))
|
||||
|
||||
@@ -18,10 +18,11 @@ from database.fields import (
|
||||
SafeSortedListField,
|
||||
)
|
||||
from database.model import AttributedDocument
|
||||
from database.model.base import ProperDictMixin
|
||||
from database.model.model_labels import ModelLabels
|
||||
from database.model.project import Project
|
||||
from database.utils import get_options
|
||||
from .metrics import MetricEvent
|
||||
from .metrics import MetricEvent, MetricEventStats
|
||||
from .output import Output
|
||||
|
||||
DEFAULT_LAST_ITERATION = 0
|
||||
@@ -66,10 +67,15 @@ class ArtifactTypeData(EmbeddedDocument):
|
||||
data_hash = StringField()
|
||||
|
||||
|
||||
class ArtifactModes:
|
||||
input = "input"
|
||||
output = "output"
|
||||
|
||||
|
||||
class Artifact(EmbeddedDocument):
|
||||
key = StringField(required=True)
|
||||
type = StringField(required=True)
|
||||
mode = StringField(choices=("input", "output"), default="output")
|
||||
mode = StringField(choices=get_options(ArtifactModes), default=ArtifactModes.output)
|
||||
uri = StringField()
|
||||
hash = StringField()
|
||||
content_size = LongField()
|
||||
@@ -78,7 +84,7 @@ class Artifact(EmbeddedDocument):
|
||||
display_data = SafeSortedListField(ListField(UnionField((int, float, str))))
|
||||
|
||||
|
||||
class Execution(EmbeddedDocument):
|
||||
class Execution(EmbeddedDocument, ProperDictMixin):
|
||||
test_split = IntField(default=0)
|
||||
parameters = SafeDictField(default=dict)
|
||||
model = StringField(reference_field="Model")
|
||||
@@ -104,6 +110,12 @@ class Task(AttributedDocument):
|
||||
"created",
|
||||
"started",
|
||||
"completed",
|
||||
"parent",
|
||||
"project",
|
||||
("company", "name"),
|
||||
("company", "type", "system_tags", "status"),
|
||||
("company", "project", "type", "system_tags", "status"),
|
||||
("status", "last_update"), # for maintenance tasks
|
||||
{
|
||||
"name": "%s.task.main_text_index" % Database.backend,
|
||||
"fields": [
|
||||
@@ -156,3 +168,4 @@ class Task(AttributedDocument):
|
||||
last_update = DateTimeField()
|
||||
last_iteration = IntField(default=DEFAULT_LAST_ITERATION)
|
||||
last_metrics = SafeMapField(field=SafeMapField(EmbeddedDocumentField(MetricEvent)))
|
||||
metric_stats = SafeMapField(field=EmbeddedDocumentField(MetricEventStats))
|
||||
|
||||
@@ -1,7 +1,6 @@
|
||||
from mongoengine import Document, StringField
|
||||
from mongoengine import Document, StringField, DynamicField
|
||||
|
||||
from database import Database, strict
|
||||
from database.fields import SafeDictField
|
||||
from database.model import DbModelMixin
|
||||
from database.model.company import Company
|
||||
|
||||
@@ -18,4 +17,4 @@ class User(DbModelMixin, Document):
|
||||
family_name = StringField(user_set_allowed=True)
|
||||
given_name = StringField(user_set_allowed=True)
|
||||
avatar = StringField()
|
||||
preferences = SafeDictField(default=dict, exclude_by_default=True)
|
||||
preferences = DynamicField(default="", exclude_by_default=True)
|
||||
|
||||
@@ -96,7 +96,12 @@ def parse_from_call(call_data, fields, cls_fields, discard_none_values=True):
|
||||
continue
|
||||
if desc:
|
||||
if callable(desc):
|
||||
desc(value)
|
||||
try:
|
||||
desc(value)
|
||||
except TypeError:
|
||||
raise ParseCallError(f"expecting {desc.__name__}", field=field)
|
||||
except Exception as ex:
|
||||
raise ParseCallError(str(ex), field=field)
|
||||
else:
|
||||
if issubclass(desc, (list, tuple, dict)) and not isinstance(
|
||||
value, desc
|
||||
|
||||
@@ -10,7 +10,11 @@ from pathlib import Path
|
||||
from requests.adapters import HTTPAdapter
|
||||
from requests.packages.urllib3.util.retry import Retry
|
||||
|
||||
HERE = Path(__file__).parent
|
||||
HERE = Path(__file__).resolve().parent
|
||||
|
||||
session = requests.Session()
|
||||
adapter = HTTPAdapter(max_retries=Retry(5, backoff_factor=0.5))
|
||||
session.mount('http://', adapter)
|
||||
|
||||
|
||||
def apply_mappings_to_host(host: str):
|
||||
@@ -20,10 +24,6 @@ def apply_mappings_to_host(host: str):
|
||||
es_server = host
|
||||
url = f"{es_server}/_template/{f.stem}"
|
||||
|
||||
session = requests.Session()
|
||||
adapter = HTTPAdapter(max_retries=Retry(5, backoff_factor=0.5))
|
||||
session.mount('http://', adapter)
|
||||
|
||||
session.delete(url)
|
||||
r = session.post(
|
||||
url,
|
||||
|
||||
27
server/elastic/initialize.py
Normal file
27
server/elastic/initialize.py
Normal file
@@ -0,0 +1,27 @@
|
||||
from furl import furl
|
||||
|
||||
from config import config
|
||||
from elastic.apply_mappings import apply_mappings_to_host
|
||||
from es_factory import get_cluster_config
|
||||
|
||||
log = config.logger(__file__)
|
||||
|
||||
|
||||
class MissingElasticConfiguration(Exception):
|
||||
"""
|
||||
Exception when cluster configuration is not found in config files
|
||||
"""
|
||||
|
||||
pass
|
||||
|
||||
|
||||
def init_es_data():
|
||||
hosts_config = get_cluster_config("events").get("hosts")
|
||||
if not hosts_config:
|
||||
raise MissingElasticConfiguration("for cluster 'events'")
|
||||
|
||||
for conf in hosts_config:
|
||||
host = furl(scheme="http", host=conf["host"], port=conf["port"]).url
|
||||
log.info(f"Applying mappings to host: {host}")
|
||||
res = apply_mappings_to_host(host)
|
||||
log.info(res)
|
||||
@@ -1,7 +1,7 @@
|
||||
{
|
||||
"template": "events-*",
|
||||
"settings": {
|
||||
"number_of_shards": 5
|
||||
"number_of_shards": 1
|
||||
},
|
||||
"mappings": {
|
||||
"_default_": {
|
||||
|
||||
@@ -1,220 +0,0 @@
|
||||
import importlib.util
|
||||
from datetime import datetime
|
||||
from pathlib import Path
|
||||
from uuid import uuid4
|
||||
|
||||
import attr
|
||||
from furl import furl
|
||||
from mongoengine.connection import get_db
|
||||
from semantic_version import Version
|
||||
|
||||
import database.utils
|
||||
from bll.queue import QueueBLL
|
||||
from config import config
|
||||
from database import Database
|
||||
from database.model.auth import Role
|
||||
from database.model.auth import User as AuthUser, Credentials
|
||||
from database.model.company import Company
|
||||
from database.model.queue import Queue
|
||||
from database.model.settings import Settings
|
||||
from database.model.user import User
|
||||
from database.model.version import Version as DatabaseVersion
|
||||
from elastic.apply_mappings import apply_mappings_to_host
|
||||
from es_factory import get_cluster_config
|
||||
from service_repo.auth.fixed_user import FixedUser
|
||||
|
||||
log = config.logger(__file__)
|
||||
|
||||
migration_dir = (Path(__file__) / "../../migration/mongodb").resolve()
|
||||
|
||||
|
||||
class MissingElasticConfiguration(Exception):
|
||||
"""
|
||||
Exception when cluster configuration is not found in config files
|
||||
"""
|
||||
|
||||
pass
|
||||
|
||||
|
||||
def init_es_data():
|
||||
hosts_config = get_cluster_config("events").get("hosts")
|
||||
if not hosts_config:
|
||||
raise MissingElasticConfiguration("for cluster 'events'")
|
||||
|
||||
for conf in hosts_config:
|
||||
host = furl(scheme="http", host=conf["host"], port=conf["port"]).url
|
||||
log.info(f"Applying mappings to host: {host}")
|
||||
res = apply_mappings_to_host(host)
|
||||
log.info(res)
|
||||
|
||||
|
||||
def _ensure_company():
|
||||
company_id = config.get("apiserver.default_company")
|
||||
company = Company.objects(id=company_id).only("id").first()
|
||||
if company:
|
||||
return company_id
|
||||
|
||||
company_name = "trains"
|
||||
log.info(f"Creating company: {company_name}")
|
||||
company = Company(id=company_id, name=company_name)
|
||||
company.save()
|
||||
return company_id
|
||||
|
||||
|
||||
def _ensure_default_queue(company):
|
||||
"""
|
||||
If no queue is present for the company then
|
||||
create a new one and mark it as a default
|
||||
"""
|
||||
queue = Queue.objects(company=company).only("id").first()
|
||||
if queue:
|
||||
return
|
||||
|
||||
QueueBLL.create(company, name="default", system_tags=["default"])
|
||||
|
||||
|
||||
def _ensure_auth_user(user_data, company_id):
|
||||
ensure_credentials = {"key", "secret"}.issubset(user_data.keys())
|
||||
if ensure_credentials:
|
||||
user = AuthUser.objects(
|
||||
credentials__match=Credentials(
|
||||
key=user_data["key"], secret=user_data["secret"]
|
||||
)
|
||||
).first()
|
||||
if user:
|
||||
return user.id
|
||||
|
||||
log.info(f"Creating user: {user_data['name']}")
|
||||
user = AuthUser(
|
||||
id=user_data.get("id", f"__{user_data['name']}__"),
|
||||
name=user_data["name"],
|
||||
company=company_id,
|
||||
role=user_data["role"],
|
||||
email=user_data["email"],
|
||||
created=datetime.utcnow(),
|
||||
credentials=[Credentials(key=user_data["key"], secret=user_data["secret"])]
|
||||
if ensure_credentials
|
||||
else None,
|
||||
)
|
||||
|
||||
user.save()
|
||||
|
||||
return user.id
|
||||
|
||||
|
||||
def _ensure_user(user: FixedUser, company_id: str):
|
||||
if User.objects(id=user.user_id).first():
|
||||
return
|
||||
|
||||
data = attr.asdict(user)
|
||||
data["id"] = user.user_id
|
||||
data["email"] = f"{user.user_id}@example.com"
|
||||
data["role"] = Role.user
|
||||
|
||||
_ensure_auth_user(user_data=data, company_id=company_id)
|
||||
|
||||
given_name, _, family_name = user.name.partition(" ")
|
||||
|
||||
User(
|
||||
id=user.user_id,
|
||||
company=company_id,
|
||||
name=user.name,
|
||||
given_name=given_name,
|
||||
family_name=family_name,
|
||||
).save()
|
||||
|
||||
|
||||
def _apply_migrations():
|
||||
if not migration_dir.is_dir():
|
||||
raise ValueError(f"Invalid migration dir {migration_dir}")
|
||||
|
||||
try:
|
||||
previous_versions = sorted(
|
||||
(Version(ver.num) for ver in DatabaseVersion.objects().only("num")),
|
||||
reverse=True,
|
||||
)
|
||||
except ValueError as ex:
|
||||
raise ValueError(f"Invalid database version number encountered: {ex}")
|
||||
|
||||
last_version = previous_versions[0] if previous_versions else Version("0.0.0")
|
||||
|
||||
try:
|
||||
new_scripts = {
|
||||
ver: path
|
||||
for ver, path in ((Version(f.stem), f) for f in migration_dir.glob("*.py"))
|
||||
if ver > last_version
|
||||
}
|
||||
except ValueError as ex:
|
||||
raise ValueError(f"Failed parsing migration version from file: {ex}")
|
||||
|
||||
dbs = {Database.auth: "migrate_auth", Database.backend: "migrate_backend"}
|
||||
|
||||
migration_log = log.getChild("mongodb_migration")
|
||||
|
||||
for script_version in sorted(new_scripts.keys()):
|
||||
script = new_scripts[script_version]
|
||||
spec = importlib.util.spec_from_file_location(script.stem, str(script))
|
||||
module = importlib.util.module_from_spec(spec)
|
||||
spec.loader.exec_module(module)
|
||||
|
||||
for alias, func_name in dbs.items():
|
||||
func = getattr(module, func_name, None)
|
||||
if not func:
|
||||
continue
|
||||
try:
|
||||
migration_log.info(f"Applying {script.stem}/{func_name}()")
|
||||
func(get_db(alias))
|
||||
except Exception:
|
||||
migration_log.exception(f"Failed applying {script}:{func_name}()")
|
||||
raise ValueError("Migration failed, aborting. Please restore backup.")
|
||||
|
||||
DatabaseVersion(
|
||||
id=database.utils.id(),
|
||||
num=script.stem,
|
||||
created=datetime.utcnow(),
|
||||
desc="Applied on server startup",
|
||||
).save()
|
||||
|
||||
|
||||
def _ensure_uuid():
|
||||
Settings.add_value("server.uuid", str(uuid4()))
|
||||
|
||||
|
||||
def init_mongo_data():
|
||||
try:
|
||||
_apply_migrations()
|
||||
|
||||
_ensure_uuid()
|
||||
|
||||
company_id = _ensure_company()
|
||||
_ensure_default_queue(company_id)
|
||||
|
||||
users = [
|
||||
{
|
||||
"name": "apiserver",
|
||||
"role": Role.system,
|
||||
"email": "apiserver@example.com",
|
||||
},
|
||||
{
|
||||
"name": "webserver",
|
||||
"role": Role.system,
|
||||
"email": "webserver@example.com",
|
||||
},
|
||||
{"name": "tests", "role": Role.user, "email": "tests@example.com"},
|
||||
]
|
||||
|
||||
for user in users:
|
||||
credentials = config.get(f"secure.credentials.{user['name']}")
|
||||
user["key"] = credentials.user_key
|
||||
user["secret"] = credentials.user_secret
|
||||
_ensure_auth_user(user, company_id)
|
||||
|
||||
if FixedUser.enabled():
|
||||
log.info("Fixed users mode is enabled")
|
||||
for user in FixedUser.from_config():
|
||||
try:
|
||||
_ensure_user(user, company_id)
|
||||
except Exception as ex:
|
||||
log.error(f"Failed creating fixed user {user['name']}: {ex}")
|
||||
except Exception as ex:
|
||||
log.exception("Failed initializing mongodb")
|
||||
70
server/mongo/initialize/__init__.py
Normal file
70
server/mongo/initialize/__init__.py
Normal file
@@ -0,0 +1,70 @@
|
||||
from pathlib import Path
|
||||
|
||||
from config import config
|
||||
from database.model.auth import Role
|
||||
from service_repo.auth.fixed_user import FixedUser
|
||||
from .migration import _apply_migrations
|
||||
from .pre_populate import PrePopulate
|
||||
from .user import ensure_fixed_user, _ensure_auth_user, _ensure_backend_user
|
||||
from .util import _ensure_company, _ensure_default_queue, _ensure_uuid
|
||||
|
||||
log = config.logger(__package__)
|
||||
|
||||
|
||||
def init_mongo_data():
|
||||
try:
|
||||
empty_dbs = _apply_migrations(log)
|
||||
|
||||
_ensure_uuid()
|
||||
|
||||
company_id = _ensure_company(log)
|
||||
|
||||
_ensure_default_queue(company_id)
|
||||
|
||||
if empty_dbs and config.get("apiserver.mongo.pre_populate.enabled", False):
|
||||
zip_file = config.get("apiserver.mongo.pre_populate.zip_file")
|
||||
if not zip_file or not Path(zip_file).is_file():
|
||||
msg = f"Failed pre-populating database: invalid zip file {zip_file}"
|
||||
if config.get("apiserver.mongo.pre_populate.fail_on_error", False):
|
||||
log.error(msg)
|
||||
raise ValueError(msg)
|
||||
else:
|
||||
log.warning(msg)
|
||||
else:
|
||||
|
||||
user_id = _ensure_backend_user(
|
||||
"__allegroai__", company_id, "Allegro.ai"
|
||||
)
|
||||
|
||||
PrePopulate.import_from_zip(zip_file, user_id=user_id)
|
||||
|
||||
users = [
|
||||
{
|
||||
"name": "apiserver",
|
||||
"role": Role.system,
|
||||
"email": "apiserver@example.com",
|
||||
},
|
||||
{
|
||||
"name": "webserver",
|
||||
"role": Role.system,
|
||||
"email": "webserver@example.com",
|
||||
},
|
||||
{"name": "tests", "role": Role.user, "email": "tests@example.com"},
|
||||
]
|
||||
|
||||
for user in users:
|
||||
credentials = config.get(f"secure.credentials.{user['name']}")
|
||||
user["key"] = credentials.user_key
|
||||
user["secret"] = credentials.user_secret
|
||||
_ensure_auth_user(user, company_id, log=log)
|
||||
|
||||
if FixedUser.enabled():
|
||||
log.info("Fixed users mode is enabled")
|
||||
FixedUser.validate()
|
||||
for user in FixedUser.from_config():
|
||||
try:
|
||||
ensure_fixed_user(user, company_id, log=log)
|
||||
except Exception as ex:
|
||||
log.error(f"Failed creating fixed user {user.name}: {ex}")
|
||||
except Exception as ex:
|
||||
log.exception("Failed initializing mongodb")
|
||||
86
server/mongo/initialize/migration.py
Normal file
86
server/mongo/initialize/migration.py
Normal file
@@ -0,0 +1,86 @@
|
||||
import importlib.util
|
||||
from datetime import datetime
|
||||
from logging import Logger
|
||||
from pathlib import Path
|
||||
|
||||
from mongoengine.connection import get_db
|
||||
from semantic_version import Version
|
||||
|
||||
import database.utils
|
||||
from database import Database
|
||||
from database.model.version import Version as DatabaseVersion
|
||||
|
||||
migration_dir = Path(__file__).resolve().parent.with_name("migrations")
|
||||
|
||||
|
||||
def _apply_migrations(log: Logger) -> bool:
|
||||
"""
|
||||
Apply migrations as found in the migration dir.
|
||||
Returns a boolean indicating whether the database was empty prior to migration.
|
||||
"""
|
||||
log = log.getChild(Path(__file__).stem)
|
||||
|
||||
log.info(f"Started mongodb migrations")
|
||||
|
||||
if not migration_dir.is_dir():
|
||||
raise ValueError(f"Invalid migration dir {migration_dir}")
|
||||
|
||||
empty_dbs = not any(
|
||||
get_db(alias).collection_names()
|
||||
for alias in database.utils.get_options(Database)
|
||||
)
|
||||
|
||||
try:
|
||||
previous_versions = sorted(
|
||||
(Version(ver.num) for ver in DatabaseVersion.objects().only("num")),
|
||||
reverse=True,
|
||||
)
|
||||
except ValueError as ex:
|
||||
raise ValueError(f"Invalid database version number encountered: {ex}")
|
||||
|
||||
last_version = previous_versions[0] if previous_versions else Version("0.0.0")
|
||||
|
||||
try:
|
||||
new_scripts = {
|
||||
ver: path
|
||||
for ver, path in ((Version(f.stem), f) for f in migration_dir.glob("*.py"))
|
||||
if ver > last_version
|
||||
}
|
||||
except ValueError as ex:
|
||||
raise ValueError(f"Failed parsing migration version from file: {ex}")
|
||||
|
||||
dbs = {Database.auth: "migrate_auth", Database.backend: "migrate_backend"}
|
||||
|
||||
for script_version in sorted(new_scripts):
|
||||
script = new_scripts[script_version]
|
||||
|
||||
if empty_dbs:
|
||||
log.info(f"Skipping migration {script.name} (empty databases)")
|
||||
else:
|
||||
spec = importlib.util.spec_from_file_location(script.stem, str(script))
|
||||
module = importlib.util.module_from_spec(spec)
|
||||
spec.loader.exec_module(module)
|
||||
|
||||
for alias, func_name in dbs.items():
|
||||
func = getattr(module, func_name, None)
|
||||
if not func:
|
||||
continue
|
||||
try:
|
||||
log.info(f"Applying {script.stem}/{func_name}()")
|
||||
func(get_db(alias))
|
||||
except Exception:
|
||||
log.exception(f"Failed applying {script}:{func_name}()")
|
||||
raise ValueError(
|
||||
"Migration failed, aborting. Please restore backup."
|
||||
)
|
||||
|
||||
DatabaseVersion(
|
||||
id=database.utils.id(),
|
||||
num=script.stem,
|
||||
created=datetime.utcnow(),
|
||||
desc="Applied on server startup",
|
||||
).save()
|
||||
|
||||
log.info("Finished mongodb migrations")
|
||||
|
||||
return empty_dbs
|
||||
153
server/mongo/initialize/pre_populate.py
Normal file
153
server/mongo/initialize/pre_populate.py
Normal file
@@ -0,0 +1,153 @@
|
||||
import importlib
|
||||
from collections import defaultdict
|
||||
from datetime import datetime
|
||||
from os.path import splitext
|
||||
from typing import List, Optional, Any, Type, Set, Dict
|
||||
from zipfile import ZipFile, ZIP_BZIP2
|
||||
|
||||
import mongoengine
|
||||
from tqdm import tqdm
|
||||
|
||||
|
||||
class PrePopulate:
|
||||
@classmethod
|
||||
def export_to_zip(
|
||||
cls, filename: str, experiments: List[str] = None, projects: List[str] = None
|
||||
):
|
||||
with ZipFile(filename, mode="w", compression=ZIP_BZIP2) as zfile:
|
||||
cls._export(zfile, experiments, projects)
|
||||
|
||||
@classmethod
|
||||
def import_from_zip(cls, filename: str, user_id: str = None):
|
||||
with ZipFile(filename) as zfile:
|
||||
cls._import(zfile, user_id)
|
||||
|
||||
@staticmethod
|
||||
def _resolve_type(
|
||||
cls: Type[mongoengine.Document], ids: Optional[List[str]]
|
||||
) -> List[Any]:
|
||||
ids = set(ids)
|
||||
items = list(cls.objects(id__in=list(ids)))
|
||||
resolved = {i.id for i in items}
|
||||
missing = ids - resolved
|
||||
for name_candidate in missing:
|
||||
results = list(cls.objects(name=name_candidate))
|
||||
if not results:
|
||||
print(f"ERROR: no match for `{name_candidate}`")
|
||||
exit(1)
|
||||
elif len(results) > 1:
|
||||
print(f"ERROR: more than one match for `{name_candidate}`")
|
||||
exit(1)
|
||||
items.append(results[0])
|
||||
return items
|
||||
|
||||
@classmethod
|
||||
def _resolve_entities(
|
||||
cls, experiments: List[str] = None, projects: List[str] = None
|
||||
) -> Dict[Type[mongoengine.Document], Set[mongoengine.Document]]:
|
||||
from database.model.project import Project
|
||||
from database.model.task.task import Task
|
||||
|
||||
entities = defaultdict(set)
|
||||
|
||||
if projects:
|
||||
print("Reading projects...")
|
||||
entities[Project].update(cls._resolve_type(Project, projects))
|
||||
print("--> Reading project experiments...")
|
||||
objs = Task.objects(
|
||||
project__in=list(set(filter(None, (p.id for p in entities[Project]))))
|
||||
)
|
||||
entities[Task].update(o for o in objs if o.id not in (experiments or []))
|
||||
|
||||
if experiments:
|
||||
print("Reading experiments...")
|
||||
entities[Task].update(cls._resolve_type(Task, experiments))
|
||||
print("--> Reading experiments projects...")
|
||||
objs = Project.objects(
|
||||
id__in=list(set(filter(None, (p.project for p in entities[Task]))))
|
||||
)
|
||||
project_ids = {p.id for p in entities[Project]}
|
||||
entities[Project].update(o for o in objs if o.id not in project_ids)
|
||||
|
||||
return entities
|
||||
|
||||
@classmethod
|
||||
def _cleanup_task(cls, task):
|
||||
from database.model.task.task import TaskStatus
|
||||
|
||||
task.completed = None
|
||||
task.started = None
|
||||
if task.execution:
|
||||
task.execution.model = None
|
||||
task.execution.model_desc = None
|
||||
task.execution.model_labels = None
|
||||
if task.output:
|
||||
task.output.model = None
|
||||
|
||||
task.status = TaskStatus.created
|
||||
task.comment = "Auto generated by Allegro.ai"
|
||||
task.created = datetime.utcnow()
|
||||
task.last_iteration = 0
|
||||
task.last_update = task.created
|
||||
task.status_changed = task.created
|
||||
task.status_message = ""
|
||||
task.status_reason = ""
|
||||
task.user = ""
|
||||
|
||||
@classmethod
|
||||
def _cleanup_entity(cls, entity_cls, entity):
|
||||
from database.model.task.task import Task
|
||||
if entity_cls == Task:
|
||||
cls._cleanup_task(entity)
|
||||
|
||||
@classmethod
|
||||
def _export(
|
||||
cls, writer: ZipFile, experiments: List[str] = None, projects: List[str] = None
|
||||
):
|
||||
entities = cls._resolve_entities(experiments, projects)
|
||||
|
||||
for cls_, items in entities.items():
|
||||
if not items:
|
||||
continue
|
||||
filename = f"{cls_.__module__}.{cls_.__name__}.json"
|
||||
print(f"Writing {len(items)} items into {writer.filename}:{filename}")
|
||||
with writer.open(filename, "w") as f:
|
||||
f.write("[\n".encode("utf-8"))
|
||||
last = len(items) - 1
|
||||
for i, item in enumerate(items):
|
||||
cls._cleanup_entity(cls_, item)
|
||||
f.write(item.to_json().encode("utf-8"))
|
||||
if i != last:
|
||||
f.write(",".encode("utf-8"))
|
||||
f.write("\n".encode("utf-8"))
|
||||
f.write("]\n".encode("utf-8"))
|
||||
|
||||
@staticmethod
|
||||
def _import(reader: ZipFile, user_id: str = None):
|
||||
for file_info in reader.filelist:
|
||||
full_name = splitext(file_info.orig_filename)[0]
|
||||
print(f"Reading {reader.filename}:{full_name}...")
|
||||
module_name, _, class_name = full_name.rpartition(".")
|
||||
module = importlib.import_module(module_name)
|
||||
cls_: Type[mongoengine.Document] = getattr(module, class_name)
|
||||
|
||||
with reader.open(file_info) as f:
|
||||
for item in tqdm(
|
||||
f.readlines(),
|
||||
desc=f"Writing {cls_.__name__.lower()}s into database",
|
||||
unit="doc",
|
||||
):
|
||||
item = (
|
||||
item.decode("utf-8")
|
||||
.strip()
|
||||
.lstrip("[")
|
||||
.rstrip("]")
|
||||
.rstrip(",")
|
||||
.strip()
|
||||
)
|
||||
if not item:
|
||||
continue
|
||||
doc = cls_.from_json(item)
|
||||
if user_id is not None and hasattr(doc, "user"):
|
||||
doc.user = user_id
|
||||
doc.save(force_insert=True)
|
||||
74
server/mongo/initialize/user.py
Normal file
74
server/mongo/initialize/user.py
Normal file
@@ -0,0 +1,74 @@
|
||||
from datetime import datetime
|
||||
from logging import Logger
|
||||
|
||||
import attr
|
||||
|
||||
from database.model.auth import Role
|
||||
from database.model.auth import User as AuthUser, Credentials
|
||||
from database.model.user import User
|
||||
from service_repo.auth.fixed_user import FixedUser
|
||||
|
||||
|
||||
def _ensure_auth_user(user_data: dict, company_id: str, log: Logger):
|
||||
ensure_credentials = {"key", "secret"}.issubset(user_data)
|
||||
if ensure_credentials:
|
||||
user = AuthUser.objects(
|
||||
credentials__match=Credentials(
|
||||
key=user_data["key"], secret=user_data["secret"]
|
||||
)
|
||||
).first()
|
||||
if user:
|
||||
return user.id
|
||||
|
||||
log.info(f"Creating user: {user_data['name']}")
|
||||
user = AuthUser(
|
||||
id=user_data.get("id", f"__{user_data['name']}__"),
|
||||
name=user_data["name"],
|
||||
company=company_id,
|
||||
role=user_data["role"],
|
||||
email=user_data["email"],
|
||||
created=datetime.utcnow(),
|
||||
credentials=[Credentials(key=user_data["key"], secret=user_data["secret"])]
|
||||
if ensure_credentials
|
||||
else None,
|
||||
)
|
||||
|
||||
user.save()
|
||||
|
||||
return user.id
|
||||
|
||||
|
||||
def _ensure_backend_user(user_id: str, company_id: str, user_name: str):
|
||||
given_name, _, family_name = user_name.partition(" ")
|
||||
|
||||
User(
|
||||
id=user_id,
|
||||
company=company_id,
|
||||
name=user_name,
|
||||
given_name=given_name,
|
||||
family_name=family_name,
|
||||
).save()
|
||||
|
||||
return user_id
|
||||
|
||||
|
||||
def ensure_fixed_user(user: FixedUser, company_id: str, log: Logger):
|
||||
if User.objects(id=user.user_id).first():
|
||||
return
|
||||
|
||||
data = attr.asdict(user)
|
||||
data["id"] = user.user_id
|
||||
data["email"] = f"{user.user_id}@example.com"
|
||||
data["role"] = Role.user
|
||||
|
||||
_ensure_auth_user(user_data=data, company_id=company_id, log=log)
|
||||
|
||||
given_name, _, family_name = user.name.partition(" ")
|
||||
|
||||
User(
|
||||
id=user.user_id,
|
||||
company=company_id,
|
||||
name=user.name,
|
||||
given_name=given_name,
|
||||
family_name=family_name,
|
||||
).save()
|
||||
40
server/mongo/initialize/util.py
Normal file
40
server/mongo/initialize/util.py
Normal file
@@ -0,0 +1,40 @@
|
||||
from logging import Logger
|
||||
from uuid import uuid4
|
||||
|
||||
from bll.queue import QueueBLL
|
||||
from config import config
|
||||
from config.info import get_default_company
|
||||
from database.model.company import Company
|
||||
from database.model.queue import Queue
|
||||
from database.model.settings import Settings
|
||||
|
||||
log = config.logger(__file__)
|
||||
|
||||
|
||||
def _ensure_company(log: Logger):
|
||||
company_id = get_default_company()
|
||||
company = Company.objects(id=company_id).only("id").first()
|
||||
if company:
|
||||
return company_id
|
||||
|
||||
company_name = "trains"
|
||||
log.info(f"Creating company: {company_name}")
|
||||
company = Company(id=company_id, name=company_name)
|
||||
company.save()
|
||||
return company_id
|
||||
|
||||
|
||||
def _ensure_default_queue(company):
|
||||
"""
|
||||
If no queue is present for the company then
|
||||
create a new one and mark it as a default
|
||||
"""
|
||||
queue = Queue.objects(company=company).only("id").first()
|
||||
if queue:
|
||||
return
|
||||
|
||||
QueueBLL.create(company, name="default", system_tags=["default"])
|
||||
|
||||
|
||||
def _ensure_uuid():
|
||||
Settings.add_value("server.uuid", str(uuid4()))
|
||||
20
server/mongo/migrations/0.13.0.py
Normal file
20
server/mongo/migrations/0.13.0.py
Normal file
@@ -0,0 +1,20 @@
|
||||
import json
|
||||
|
||||
from pymongo.database import Database, Collection
|
||||
|
||||
|
||||
def migrate_auth(db: Database):
|
||||
collection: Collection = db["user"]
|
||||
if "name_1_company_1" in [doc["name"] for doc in collection.list_indexes()]:
|
||||
collection.drop_index("name_1_company_1")
|
||||
|
||||
|
||||
def migrate_backend(db: Database):
|
||||
collection: Collection = db["user"]
|
||||
users = collection.find(
|
||||
{"preferences": {"$exists": True, "$ne": None, "$type": "object"}}
|
||||
)
|
||||
for doc in users:
|
||||
collection.update_one(
|
||||
{"_id": doc["_id"]}, {"$set": {"preferences": json.dumps(doc["preferences"])}}
|
||||
)
|
||||
46
server/mongo/migrations/0.14.0.py
Normal file
46
server/mongo/migrations/0.14.0.py
Normal file
@@ -0,0 +1,46 @@
|
||||
import hashlib
|
||||
|
||||
from pymongo.database import Database, Collection
|
||||
|
||||
from service_repo.auth.fixed_user import FixedUser
|
||||
|
||||
|
||||
def _get_ids():
|
||||
if not FixedUser.enabled():
|
||||
return
|
||||
|
||||
return {
|
||||
hashlib.md5(f"{user.username}:{user.password}".encode()).hexdigest(): user.user_id
|
||||
for user in FixedUser.from_config()
|
||||
}
|
||||
|
||||
|
||||
def _switch_uuid(collection: Collection, uuid_field: str, uuids: dict):
|
||||
docs = list(collection.find({uuid_field: {"$in": [uuids]}}))
|
||||
if not docs:
|
||||
return
|
||||
replaced_uuids = [doc[uuid_field] for doc in docs]
|
||||
for doc in docs:
|
||||
doc[uuid_field] = uuids[doc[uuid_field]]
|
||||
collection.insert_many(docs)
|
||||
collection.delete_many({uuid_field: {"$in": replaced_uuids}})
|
||||
|
||||
|
||||
def migrate_auth(db: Database):
|
||||
uuids = _get_ids()
|
||||
if not uuids:
|
||||
return
|
||||
|
||||
collection = db["user"]
|
||||
collection.drop_index("name_1_company_1")
|
||||
|
||||
_switch_uuid(collection=collection, uuid_field="_id", uuids=uuids)
|
||||
|
||||
|
||||
def migrate_backend(db: Database):
|
||||
uuids = _get_ids()
|
||||
if not uuids:
|
||||
return
|
||||
|
||||
for name in ("project", "task", "model"):
|
||||
_switch_uuid(collection=db[name], uuid_field="user", uuids=uuids)
|
||||
@@ -1,31 +1,30 @@
|
||||
six
|
||||
Flask>=0.12.2
|
||||
elasticsearch>=5.0.0,<6.0.0
|
||||
pyhocon>=0.3.35
|
||||
requests>=2.13.0
|
||||
arrow>=0.10.0
|
||||
pymongo==3.6.1 # 3.7 has a bug multiple users logged in
|
||||
Flask-Cors>=3.0.5
|
||||
Flask-Compress>=1.4.0
|
||||
mongoengine==0.16.2
|
||||
jsonmodels>=2.3
|
||||
pyjwt>=1.3.0
|
||||
gunicorn>=19.7.1
|
||||
Jinja2==2.10
|
||||
python-rapidjson>=0.6.3
|
||||
jsonschema>=2.6.0
|
||||
dpath>=1.4.2
|
||||
funcsigs==1.0.2
|
||||
luqum>=0.7.2
|
||||
typing>=3.6.4
|
||||
attrs>=19.1.0
|
||||
nested_dict>=1.61
|
||||
related>=0.7.2
|
||||
validators>=0.12.4
|
||||
fastjsonschema>=2.8
|
||||
boltons>=19.1.0
|
||||
semantic_version>=2.6.0,<3
|
||||
dpath>=1.4.2,<2.0
|
||||
elasticsearch>=5.0.0,<6.0.0
|
||||
fastjsonschema>=2.8
|
||||
Flask-Compress>=1.4.0
|
||||
Flask-Cors>=3.0.5
|
||||
Flask>=0.12.2
|
||||
funcsigs==1.0.2
|
||||
furl>=2.0.0
|
||||
redis>=2.10.5
|
||||
gunicorn>=19.7.1
|
||||
humanfriendly==4.18
|
||||
Jinja2==2.10
|
||||
jsonmodels>=2.3
|
||||
jsonschema>=2.6.0
|
||||
luqum>=0.7.2
|
||||
mongoengine==0.16.2
|
||||
nested_dict>=1.61
|
||||
psutil>=5.6.5
|
||||
pyhocon>=0.3.35
|
||||
pyjwt>=1.3.0
|
||||
pymongo==3.6.1 # 3.7 has a bug multiple users logged in
|
||||
python-rapidjson>=0.6.3
|
||||
redis>=2.10.5
|
||||
related>=0.7.2
|
||||
requests>=2.13.0
|
||||
semantic_version>=2.8.0,<3
|
||||
six
|
||||
tqdm
|
||||
validators>=0.12.4
|
||||
@@ -171,6 +171,30 @@
|
||||
critical
|
||||
]
|
||||
}
|
||||
event_type_enum {
|
||||
type: string
|
||||
enum: [
|
||||
training_stats_scalar
|
||||
training_stats_vector
|
||||
training_debug_image
|
||||
plot
|
||||
log
|
||||
]
|
||||
}
|
||||
task_metric {
|
||||
type: object
|
||||
required: [task, metric]
|
||||
properties {
|
||||
task {
|
||||
description: "Task ID"
|
||||
type: string
|
||||
}
|
||||
metric {
|
||||
description: "Metric name"
|
||||
type: string
|
||||
}
|
||||
}
|
||||
}
|
||||
task_log_event {
|
||||
description: """A log event associated with a task."""
|
||||
type: object
|
||||
@@ -234,6 +258,7 @@
|
||||
properties {
|
||||
added { type: integer }
|
||||
errors { type: integer }
|
||||
errors_info { type: object }
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -319,6 +344,84 @@
|
||||
}
|
||||
}
|
||||
}
|
||||
"2.7" {
|
||||
description: "Get the debug image events for the requested amount of iterations per each task's metric"
|
||||
request {
|
||||
type: object
|
||||
required: [
|
||||
metrics
|
||||
]
|
||||
properties {
|
||||
metrics {
|
||||
type: array
|
||||
items { "$ref": "#/definitions/task_metric" }
|
||||
description: "List metrics for which the envents will be retreived"
|
||||
}
|
||||
iters {
|
||||
type: integer
|
||||
description: "Max number of latest iterations for which to return debug images"
|
||||
}
|
||||
navigate_earlier {
|
||||
type: boolean
|
||||
description: "If set then events are retreived from latest iterations to earliest ones. Otherwise from earliest iterations to the latest. The default is True"
|
||||
}
|
||||
refresh {
|
||||
type: boolean
|
||||
description: "If set then scroll will be moved to the latest iterations. The default is False"
|
||||
}
|
||||
scroll_id {
|
||||
type: string
|
||||
description: "Scroll ID of previous call (used for getting more results)"
|
||||
}
|
||||
}
|
||||
}
|
||||
response {
|
||||
type: object
|
||||
properties {
|
||||
metrics {
|
||||
type: array
|
||||
items: { type: object }
|
||||
description: "Debug image events grouped by task metrics and iterations"
|
||||
}
|
||||
scroll_id {
|
||||
type: string
|
||||
description: "Scroll ID for getting more results"
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
get_task_metrics{
|
||||
"2.7": {
|
||||
description: "For each task, get a list of metrics for which the requested event type was reported"
|
||||
request {
|
||||
type: object
|
||||
required: [
|
||||
tasks
|
||||
]
|
||||
properties {
|
||||
tasks {
|
||||
type: array
|
||||
items { type: string }
|
||||
description: "Task IDs"
|
||||
}
|
||||
event_type {
|
||||
"description": "Event type"
|
||||
"$ref": "#/definitions/event_type_enum"
|
||||
}
|
||||
}
|
||||
}
|
||||
response {
|
||||
type: object
|
||||
properties {
|
||||
metrics {
|
||||
type: array
|
||||
items { type: object }
|
||||
description: "List of task with their metrics"
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
get_task_log {
|
||||
"1.5" {
|
||||
@@ -427,6 +530,59 @@
|
||||
}
|
||||
}
|
||||
}
|
||||
"2.7" {
|
||||
description: "Get 'log' events for this task"
|
||||
request {
|
||||
type: object
|
||||
required: [
|
||||
task
|
||||
]
|
||||
properties {
|
||||
task {
|
||||
type: string
|
||||
description: "Task ID"
|
||||
}
|
||||
batch_size {
|
||||
type: integer
|
||||
description: "The amount of log events to return"
|
||||
}
|
||||
navigate_earlier {
|
||||
type: boolean
|
||||
description: "If set then log events are retreived from the latest to the earliest ones (in timestamp descending order). Otherwise from the earliest to the latest ones (in timestamp ascending order). The default is True"
|
||||
}
|
||||
refresh {
|
||||
type: boolean
|
||||
description: "If set then scroll will be moved to the latest logs (if 'navigate_earlier' is set to True) or to the earliest (otherwise)"
|
||||
}
|
||||
scroll_id {
|
||||
type: string
|
||||
description: "Scroll ID of previous call (used for getting more results)"
|
||||
}
|
||||
}
|
||||
}
|
||||
response {
|
||||
type: object
|
||||
properties {
|
||||
events {
|
||||
type: array
|
||||
items { type: object }
|
||||
description: "Log items list"
|
||||
}
|
||||
returned {
|
||||
type: integer
|
||||
description: "Number of log events returned"
|
||||
}
|
||||
total {
|
||||
type: number
|
||||
description: "Total number of log events available for this query"
|
||||
}
|
||||
scroll_id {
|
||||
type: string
|
||||
description: "Scroll ID for getting more results"
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
get_task_events {
|
||||
"2.1" {
|
||||
@@ -455,7 +611,7 @@
|
||||
}
|
||||
batch_size {
|
||||
type: integer
|
||||
description: "Number of events to return each time"
|
||||
description: "Number of events to return each time (default 500)"
|
||||
}
|
||||
event_type {
|
||||
type: string
|
||||
|
||||
@@ -261,7 +261,7 @@
|
||||
type: string
|
||||
}
|
||||
uri {
|
||||
description: "URI for the model"
|
||||
description: "URI for the model. Exactly one of uri or override_model_id is a required."
|
||||
type: string
|
||||
}
|
||||
name {
|
||||
@@ -283,7 +283,7 @@
|
||||
items {type: string}
|
||||
}
|
||||
override_model_id {
|
||||
description: "Override model ID. If provided, this model is updated in the task."
|
||||
description: "Override model ID. If provided, this model is updated in the task. Exactly one of override_model_id or uri is required."
|
||||
type: string
|
||||
}
|
||||
iteration {
|
||||
@@ -324,7 +324,6 @@
|
||||
required: [
|
||||
uri
|
||||
name
|
||||
labels
|
||||
]
|
||||
properties {
|
||||
uri {
|
||||
|
||||
@@ -86,6 +86,7 @@ endpoints {
|
||||
}
|
||||
}
|
||||
report_stats_option {
|
||||
allow_roles = [ "*" ]
|
||||
"2.4" {
|
||||
description: "Get or set the report statistics option per-company"
|
||||
request {
|
||||
@@ -117,6 +118,10 @@ report_stats_option {
|
||||
description: "If enabled, returns Id of the user who enabled the option"
|
||||
type: string
|
||||
}
|
||||
current_version {
|
||||
description: "Returns the current server version"
|
||||
type: string
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -550,6 +550,60 @@ get_all {
|
||||
}
|
||||
}
|
||||
}
|
||||
clone {
|
||||
"2.5" {
|
||||
description: "Clone an existing task"
|
||||
request {
|
||||
type: object
|
||||
required: [ task ]
|
||||
properties {
|
||||
task {
|
||||
description: "ID of the task"
|
||||
type: string
|
||||
}
|
||||
new_task_name {
|
||||
description: "The name of the cloned task. If not provided then taken from the original task"
|
||||
type: string
|
||||
}
|
||||
new_task_comment {
|
||||
description: "The comment of the cloned task. If not provided then taken from the original task"
|
||||
type: string
|
||||
}
|
||||
new_task_tags {
|
||||
description: "The user-defined tags of the cloned task. If not provided then taken from the original task"
|
||||
type: array
|
||||
items { type: string }
|
||||
}
|
||||
new_task_system_tags {
|
||||
description: "The system tags of the cloned task. If not provided then empty"
|
||||
type: array
|
||||
items { type: string }
|
||||
}
|
||||
new_task_parent {
|
||||
description: "The parent of the cloned task. If not provided then taken from the original task"
|
||||
type: string
|
||||
}
|
||||
new_task_project {
|
||||
description: "The project of the cloned task. If not provided then taken from the original task"
|
||||
type: string
|
||||
}
|
||||
execution_overrides {
|
||||
description: "The execution params for the cloned task. The params not specified are taken from the original task"
|
||||
"$ref": "#/definitions/execution"
|
||||
}
|
||||
}
|
||||
}
|
||||
response {
|
||||
type: object
|
||||
properties {
|
||||
id {
|
||||
description: "ID of the new task"
|
||||
type: string
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
create {
|
||||
"2.1" {
|
||||
description: "Create a new task"
|
||||
@@ -1304,4 +1358,40 @@ ping {
|
||||
additionalProperties: false
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
add_or_update_artifacts {
|
||||
"2.6" {
|
||||
description: """ Update an existing artifact (search by key/mode) or add a new one """
|
||||
request {
|
||||
type: object
|
||||
required: [ task, artifacts ]
|
||||
properties {
|
||||
task {
|
||||
description: "Task ID"
|
||||
type: string
|
||||
}
|
||||
artifacts {
|
||||
description: "Artifacts to add or update"
|
||||
type: array
|
||||
items { "$ref": "#/definitions/artifact" }
|
||||
}
|
||||
}
|
||||
}
|
||||
response {
|
||||
type: object
|
||||
properties {
|
||||
added {
|
||||
description: "Keys of artifacts added"
|
||||
type: array
|
||||
items { type: string }
|
||||
}
|
||||
updated {
|
||||
description: "Keys of artifacts updated"
|
||||
type: array
|
||||
items { type: string }
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -1,3 +1,4 @@
|
||||
import atexit
|
||||
from argparse import ArgumentParser
|
||||
|
||||
from flask import Flask, request, Response
|
||||
@@ -9,13 +10,15 @@ import database
|
||||
from apierrors.base import BaseError
|
||||
from bll.statistics.stats_reporter import StatisticsReporter
|
||||
from config import config
|
||||
from init_data import init_es_data, init_mongo_data
|
||||
from elastic.initialize import init_es_data
|
||||
from mongo.initialize import init_mongo_data
|
||||
from service_repo import ServiceRepo, APICall
|
||||
from service_repo.auth import AuthType
|
||||
from service_repo.errors import PathParsingError
|
||||
from timing_context import TimingContext
|
||||
from updates import check_updates_thread
|
||||
from utilities import json
|
||||
from utilities.threads_manager import ThreadsManager
|
||||
|
||||
app = Flask(__name__, static_url_path="/static")
|
||||
CORS(app, **config.get("apiserver.cors"))
|
||||
@@ -41,6 +44,13 @@ check_updates_thread.start()
|
||||
StatisticsReporter.start()
|
||||
|
||||
|
||||
def graceful_shutdown():
|
||||
ThreadsManager.terminating = True
|
||||
|
||||
|
||||
atexit.register(graceful_shutdown)
|
||||
|
||||
|
||||
@app.before_first_request
|
||||
def before_app_first_request():
|
||||
pass
|
||||
|
||||
@@ -21,6 +21,8 @@ JSON_CONTENT_TYPE = "application/json"
|
||||
class DataContainer(object):
|
||||
""" Data container that supports raw data (dict or a list of batched dicts) and a data model """
|
||||
|
||||
null_schema_validator: SchemaValidator = SchemaValidator(None)
|
||||
|
||||
def __init__(self, data=None, batched_data=None):
|
||||
if data and batched_data:
|
||||
raise ValueError("data and batched data are not supported simultaneously")
|
||||
@@ -28,7 +30,7 @@ class DataContainer(object):
|
||||
self._data = None
|
||||
self._data_model = None
|
||||
self._data_model_cls = None
|
||||
self._schema_validator: SchemaValidator = SchemaValidator(None)
|
||||
self._schema_validator: SchemaValidator = self.null_schema_validator
|
||||
# use setter to properly initialize data
|
||||
self.data = data
|
||||
self.batched_data = batched_data
|
||||
|
||||
@@ -5,27 +5,45 @@ from typing import Sequence, TypeVar
|
||||
import attr
|
||||
|
||||
from config import config
|
||||
from config.info import get_default_company
|
||||
|
||||
T = TypeVar("T", bound="FixedUser")
|
||||
|
||||
|
||||
class FixedUsersError(Exception):
|
||||
pass
|
||||
|
||||
|
||||
@attr.s(auto_attribs=True)
|
||||
class FixedUser:
|
||||
username: str
|
||||
password: str
|
||||
name: str
|
||||
company: str = get_default_company()
|
||||
|
||||
def __attrs_post_init__(self):
|
||||
self.user_id = hashlib.md5(f"{self.username}:{self.password}".encode()).hexdigest()
|
||||
self.user_id = hashlib.md5(f"{self.company}:{self.username}".encode()).hexdigest()
|
||||
|
||||
@classmethod
|
||||
def enabled(cls):
|
||||
return config.get("apiserver.auth.fixed_users.enabled", False)
|
||||
|
||||
@classmethod
|
||||
def validate(cls):
|
||||
if not cls.enabled():
|
||||
return
|
||||
users = cls.from_config()
|
||||
if len({user.username for user in users}) < len(users):
|
||||
raise FixedUsersError(
|
||||
"Duplicate user names found in fixed users configuration"
|
||||
)
|
||||
|
||||
@classmethod
|
||||
@lru_cache()
|
||||
def from_config(cls) -> Sequence[T]:
|
||||
return [cls(**user) for user in config.get("apiserver.auth.fixed_users.users", [])]
|
||||
return [
|
||||
cls(**user) for user in config.get("apiserver.auth.fixed_users.users", [])
|
||||
]
|
||||
|
||||
@classmethod
|
||||
@lru_cache()
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
from enum import Enum
|
||||
from typing import Callable, Sequence, Text
|
||||
|
||||
from boltons.iterutils import remap
|
||||
from jsonmodels import models
|
||||
from jsonmodels.errors import FieldNotSupported
|
||||
|
||||
@@ -87,7 +88,14 @@ class Endpoint(object):
|
||||
Provided data_model schema if available
|
||||
"""
|
||||
try:
|
||||
return data_model.to_json_schema()
|
||||
res = data_model.to_json_schema()
|
||||
|
||||
def visit(path, key, value):
|
||||
if isinstance(value, Enum):
|
||||
value = str(value)
|
||||
return key, value
|
||||
|
||||
return remap(res, visit=visit)
|
||||
except (FieldNotSupported, TypeError):
|
||||
return str(data_model.__name__)
|
||||
|
||||
|
||||
@@ -9,6 +9,7 @@ import jsonmodels.models
|
||||
import timing_context
|
||||
from apierrors import APIError
|
||||
from apierrors.errors.bad_request import RequestPathHasInvalidVersion
|
||||
from api_version import __version__ as _api_version_
|
||||
from config import config
|
||||
from service_repo.base import PartialVersion
|
||||
from .apicall import APICall
|
||||
@@ -34,7 +35,7 @@ class ServiceRepo(object):
|
||||
"""If the check is set, parsing will fail for endpoint request with the version that is grater than the current
|
||||
maximum """
|
||||
|
||||
_max_version = PartialVersion("2.4")
|
||||
_max_version = PartialVersion(".".join(_api_version_.split(".")[:2]))
|
||||
""" Maximum version number (the highest min_version value across all endpoints) """
|
||||
|
||||
_endpoint_exp = (
|
||||
@@ -166,7 +167,7 @@ class ServiceRepo(object):
|
||||
return
|
||||
|
||||
assert isinstance(endpoint, Endpoint)
|
||||
call.actual_endpoint_version: PartialVersion = endpoint.min_version
|
||||
call.actual_endpoint_version = endpoint.min_version
|
||||
call.requires_authorization = endpoint.authorize
|
||||
return endpoint
|
||||
|
||||
|
||||
@@ -2,12 +2,15 @@ import itertools
|
||||
from collections import defaultdict
|
||||
from operator import itemgetter
|
||||
|
||||
import six
|
||||
|
||||
from apierrors import errors
|
||||
from apimodels.events import (
|
||||
MultiTaskScalarMetricsIterHistogramRequest,
|
||||
ScalarMetricsIterHistogramRequest,
|
||||
DebugImagesRequest,
|
||||
DebugImageResponse,
|
||||
MetricEvents,
|
||||
IterationEvents,
|
||||
TaskMetricsRequest,
|
||||
)
|
||||
from bll.event import EventBLL
|
||||
from bll.event.event_metrics import EventMetrics
|
||||
@@ -211,7 +214,7 @@ def vector_metrics_iter_histogram(call, company_id, req_model):
|
||||
@endpoint("events.get_task_events", required_fields=["task"])
|
||||
def get_task_events(call, company_id, _):
|
||||
task_id = call.data["task"]
|
||||
batch_size = call.data.get("batch_size")
|
||||
batch_size = call.data.get("batch_size", 500)
|
||||
event_type = call.data.get("event_type")
|
||||
scroll_id = call.data.get("scroll_id")
|
||||
order = call.data.get("order") or "asc"
|
||||
@@ -299,7 +302,7 @@ def multi_task_scalar_metrics_iter_histogram(
|
||||
call, company_id, req_model: MultiTaskScalarMetricsIterHistogramRequest
|
||||
):
|
||||
task_ids = req_model.tasks
|
||||
if isinstance(task_ids, six.string_types):
|
||||
if isinstance(task_ids, str):
|
||||
task_ids = [s.strip() for s in task_ids.split(",")]
|
||||
# Note, bll already validates task ids as it needs their names
|
||||
call.result.data = dict(
|
||||
@@ -481,7 +484,7 @@ def get_debug_images_v1_7(call, company_id, req_model):
|
||||
|
||||
|
||||
@endpoint("events.debug_images", min_version="1.8", required_fields=["task"])
|
||||
def get_debug_images(call, company_id, req_model):
|
||||
def get_debug_images_v1_8(call, company_id, req_model):
|
||||
task_id = call.data["task"]
|
||||
iters = call.data.get("iters") or 1
|
||||
scroll_id = call.data.get("scroll_id")
|
||||
@@ -507,6 +510,53 @@ def get_debug_images(call, company_id, req_model):
|
||||
)
|
||||
|
||||
|
||||
@endpoint(
|
||||
"events.debug_images",
|
||||
min_version="2.7",
|
||||
request_data_model=DebugImagesRequest,
|
||||
response_data_model=DebugImageResponse,
|
||||
)
|
||||
def get_debug_images(call, company_id, req_model: DebugImagesRequest):
|
||||
tasks = set(m.task for m in req_model.metrics)
|
||||
task_bll.assert_exists(call.identity.company, task_ids=tasks, allow_public=True)
|
||||
result = event_bll.debug_images_iterator.get_task_events(
|
||||
company_id=company_id,
|
||||
metrics=[(m.task, m.metric) for m in req_model.metrics],
|
||||
iter_count=req_model.iters,
|
||||
navigate_earlier=req_model.navigate_earlier,
|
||||
refresh=req_model.refresh,
|
||||
state_id=req_model.scroll_id,
|
||||
)
|
||||
|
||||
call.result.data_model = DebugImageResponse(
|
||||
scroll_id=result.next_scroll_id,
|
||||
metrics=[
|
||||
MetricEvents(
|
||||
task=task,
|
||||
metric=metric,
|
||||
iterations=[
|
||||
IterationEvents(iter=iteration["iter"], events=iteration["events"])
|
||||
for iteration in iterations
|
||||
],
|
||||
)
|
||||
for (task, metric, iterations) in result.metric_events
|
||||
],
|
||||
)
|
||||
|
||||
|
||||
@endpoint("events.get_task_metrics", request_data_model=TaskMetricsRequest)
|
||||
def get_tasks_metrics(call: APICall, company_id, req_model: TaskMetricsRequest):
|
||||
task_bll.assert_exists(
|
||||
call.identity.company, task_ids=req_model.tasks, allow_public=True
|
||||
)
|
||||
res = event_bll.metrics.get_tasks_metrics(
|
||||
company_id, task_ids=req_model.tasks, event_type=req_model.event_type
|
||||
)
|
||||
call.result.data = {
|
||||
"metrics": [{"task": task, "metrics": metrics} for (task, metrics) in res]
|
||||
}
|
||||
|
||||
|
||||
@endpoint("events.delete_for_task", required_fields=["task"])
|
||||
def delete_for_task(call, company_id, req_model):
|
||||
task_id = call.data["task"]
|
||||
|
||||
@@ -33,8 +33,7 @@ create_fields = {
|
||||
}
|
||||
|
||||
get_all_query_options = Project.QueryParameterOptions(
|
||||
pattern_fields=("name", "description"),
|
||||
list_fields=("tags", "system_tags", "id"),
|
||||
pattern_fields=("name", "description"), list_fields=("tags", "system_tags", "id"),
|
||||
)
|
||||
|
||||
|
||||
@@ -58,10 +57,10 @@ def get_by_id(call):
|
||||
call.result.data = {"project": project_dict}
|
||||
|
||||
|
||||
def make_projects_get_all_pipelines(project_ids, specific_state=None):
|
||||
def make_projects_get_all_pipelines(company_id, project_ids, specific_state=None):
|
||||
archived = EntityVisibility.archived.value
|
||||
|
||||
def ensure_system_tags():
|
||||
def ensure_valid_fields():
|
||||
"""
|
||||
Make sure system tags is always an array (required by subsequent $in in archived_tasks_cond
|
||||
"""
|
||||
@@ -73,14 +72,20 @@ def make_projects_get_all_pipelines(project_ids, specific_state=None):
|
||||
"then": [],
|
||||
"else": "$system_tags",
|
||||
}
|
||||
}
|
||||
},
|
||||
"status": {"$ifNull": ["$status", "unknown"]},
|
||||
}
|
||||
}
|
||||
|
||||
status_count_pipeline = [
|
||||
# count tasks per project per status
|
||||
{"$match": {"project": {"$in": project_ids}}},
|
||||
ensure_system_tags(),
|
||||
{
|
||||
"$match": {
|
||||
"company": {"$in": [None, "", company_id]},
|
||||
"project": {"$in": project_ids},
|
||||
}
|
||||
},
|
||||
ensure_valid_fields(),
|
||||
{
|
||||
"$group": {
|
||||
"_id": {
|
||||
@@ -150,10 +155,13 @@ def make_projects_get_all_pipelines(project_ids, specific_state=None):
|
||||
{
|
||||
"$match": {
|
||||
"type": {"$in": ["training", "testing", "annotation"]},
|
||||
"project": {"$in": project_ids},
|
||||
"project": {
|
||||
"company": {"$in": [None, "", company_id]},
|
||||
"$in": project_ids,
|
||||
},
|
||||
}
|
||||
},
|
||||
ensure_system_tags(),
|
||||
ensure_valid_fields(),
|
||||
{
|
||||
# for each project
|
||||
"$group": group_step
|
||||
@@ -192,7 +200,7 @@ def get_all_ex(call: APICall):
|
||||
|
||||
ids = [project["id"] for project in projects]
|
||||
status_count_pipeline, runtime_pipeline = make_projects_get_all_pipelines(
|
||||
ids, specific_state=specific_state
|
||||
call.identity.company, ids, specific_state=specific_state
|
||||
)
|
||||
|
||||
default_counts = dict.fromkeys(get_options(TaskStatus), 0)
|
||||
@@ -202,7 +210,7 @@ def get_all_ex(call: APICall):
|
||||
|
||||
status_count = defaultdict(lambda: {})
|
||||
key = itemgetter(EntityVisibility.archived.value)
|
||||
for result in Task.aggregate(*status_count_pipeline):
|
||||
for result in Task.aggregate(status_count_pipeline):
|
||||
for k, group in groupby(sorted(result["counts"], key=key), key):
|
||||
section = (
|
||||
EntityVisibility.archived if k else EntityVisibility.active
|
||||
@@ -216,7 +224,7 @@ def get_all_ex(call: APICall):
|
||||
|
||||
runtime = {
|
||||
result["_id"]: {k: v for k, v in result.items() if k != "_id"}
|
||||
for result in Task.aggregate(*runtime_pipeline)
|
||||
for result in Task.aggregate(runtime_pipeline)
|
||||
}
|
||||
|
||||
def safe_get(obj, path, default=None):
|
||||
|
||||
@@ -11,7 +11,6 @@ from database.errors import translate_errors_context
|
||||
from database.model import Company
|
||||
from database.model.company import ReportStatsOption
|
||||
from service_repo import ServiceRepo, APICall, endpoint
|
||||
from version import __version__ as current_version
|
||||
|
||||
|
||||
@endpoint("server.get_stats")
|
||||
@@ -79,7 +78,7 @@ def report_stats(call: APICall, company: str, request: ReportStatsOptionRequest)
|
||||
stats_option = ReportStatsOption(
|
||||
enabled=enabled,
|
||||
enabled_time=datetime.utcnow(),
|
||||
enabled_version=current_version,
|
||||
enabled_version=get_version(),
|
||||
enabled_user=call.identity.user,
|
||||
)
|
||||
updated = query.update(defaults__stats_option=stats_option)
|
||||
@@ -87,7 +86,8 @@ def report_stats(call: APICall, company: str, request: ReportStatsOptionRequest)
|
||||
raise errors.server_error.InternalError(
|
||||
f"Failed setting report_stats to {enabled}"
|
||||
)
|
||||
|
||||
result = ReportStatsOptionResponse(**stats_option.to_mongo())
|
||||
data = stats_option.to_mongo()
|
||||
data["current_version"] = get_version()
|
||||
result = ReportStatsOptionResponse(**data)
|
||||
|
||||
call.result.data_model = result
|
||||
|
||||
@@ -1,18 +1,17 @@
|
||||
from copy import deepcopy
|
||||
from datetime import datetime
|
||||
from operator import attrgetter
|
||||
from typing import Sequence, Callable, Type, TypeVar
|
||||
from typing import Sequence, Callable, Type, TypeVar, Union
|
||||
|
||||
import attr
|
||||
import dpath
|
||||
import mongoengine
|
||||
import six
|
||||
from mongoengine import EmbeddedDocument, Q
|
||||
from mongoengine.queryset.transform import COMPARISON_OPERATORS
|
||||
from pymongo import UpdateOne
|
||||
|
||||
from apierrors import errors, APIError
|
||||
from apimodels.base import UpdateResponse
|
||||
from apimodels.base import UpdateResponse, IdResponse
|
||||
from apimodels.tasks import (
|
||||
StartedResponse,
|
||||
ResetResponse,
|
||||
@@ -27,10 +26,19 @@ from apimodels.tasks import (
|
||||
EnqueueRequest,
|
||||
EnqueueResponse,
|
||||
DequeueResponse,
|
||||
CloneRequest,
|
||||
AddOrUpdateArtifactsRequest,
|
||||
AddOrUpdateArtifactsResponse,
|
||||
)
|
||||
from bll.event import EventBLL
|
||||
from bll.queue import QueueBLL
|
||||
from bll.task import TaskBLL, ChangeStatusRequest, update_project_time, split_by
|
||||
from bll.task import (
|
||||
TaskBLL,
|
||||
ChangeStatusRequest,
|
||||
update_project_time,
|
||||
split_by,
|
||||
ParameterKeyEscaper,
|
||||
)
|
||||
from bll.util import SetFieldsResolver
|
||||
from database.errors import translate_errors_context
|
||||
from database.model.model import Model
|
||||
@@ -94,13 +102,37 @@ def get_by_id(call: APICall, company_id, req_model: TaskRequest):
|
||||
req_model.task, company_id=company_id, allow_public=True
|
||||
)
|
||||
task_dict = task.to_proper_dict()
|
||||
conform_output_tags(call, task_dict)
|
||||
unprepare_from_saved(call, task_dict)
|
||||
call.result.data = {"task": task_dict}
|
||||
|
||||
|
||||
def escape_execution_parameters(call: APICall):
|
||||
default_prefix = "execution.parameters."
|
||||
|
||||
def escape_paths(paths, prefix=default_prefix):
|
||||
return [
|
||||
prefix + ParameterKeyEscaper.escape(path[len(prefix) :])
|
||||
if path.startswith(prefix)
|
||||
else path
|
||||
for path in paths
|
||||
]
|
||||
|
||||
projection = Task.get_projection(call.data)
|
||||
if projection:
|
||||
Task.set_projection(call.data, escape_paths(projection))
|
||||
|
||||
ordering = Task.get_ordering(call.data)
|
||||
if ordering:
|
||||
ordering = Task.set_ordering(call.data, escape_paths(ordering, default_prefix))
|
||||
Task.set_ordering(call.data, escape_paths(ordering, "-" + default_prefix))
|
||||
|
||||
|
||||
@endpoint("tasks.get_all_ex", required_fields=[])
|
||||
def get_all_ex(call: APICall):
|
||||
conform_tag_fields(call, call.data)
|
||||
|
||||
escape_execution_parameters(call)
|
||||
|
||||
with translate_errors_context():
|
||||
with TimingContext("mongo", "task_get_all_ex"):
|
||||
tasks = Task.get_many_with_join(
|
||||
@@ -109,13 +141,16 @@ def get_all_ex(call: APICall):
|
||||
query_options=get_all_query_options,
|
||||
allow_public=True, # required in case projection is requested for public dataset/versions
|
||||
)
|
||||
conform_output_tags(call, tasks)
|
||||
unprepare_from_saved(call, tasks)
|
||||
call.result.data = {"tasks": tasks}
|
||||
|
||||
|
||||
@endpoint("tasks.get_all", required_fields=[])
|
||||
def get_all(call: APICall):
|
||||
conform_tag_fields(call, call.data)
|
||||
|
||||
escape_execution_parameters(call)
|
||||
|
||||
with translate_errors_context():
|
||||
with TimingContext("mongo", "task_get_all"):
|
||||
tasks = Task.get_many(
|
||||
@@ -125,7 +160,7 @@ def get_all(call: APICall):
|
||||
query_options=get_all_query_options,
|
||||
allow_public=True, # required in case projection is requested for public dataset/versions
|
||||
)
|
||||
conform_output_tags(call, tasks)
|
||||
unprepare_from_saved(call, tasks)
|
||||
call.result.data = {"tasks": tasks}
|
||||
|
||||
|
||||
@@ -220,6 +255,45 @@ create_fields = {
|
||||
}
|
||||
|
||||
|
||||
def prepare_for_save(call: APICall, fields: dict):
|
||||
conform_tag_fields(call, fields)
|
||||
|
||||
# Strip all script fields (remove leading and trailing whitespace chars) to avoid unusable names and paths
|
||||
for field in task_script_fields:
|
||||
try:
|
||||
path = f"script/{field}"
|
||||
value = dpath.get(fields, path)
|
||||
if isinstance(value, str):
|
||||
value = value.strip()
|
||||
dpath.set(fields, path, value)
|
||||
except KeyError:
|
||||
pass
|
||||
|
||||
parameters = safe_get(fields, "execution/parameters")
|
||||
if parameters is not None:
|
||||
# Escape keys to make them mongo-safe
|
||||
parameters = {ParameterKeyEscaper.escape(k): v for k, v in parameters.items()}
|
||||
dpath.set(fields, "execution/parameters", parameters)
|
||||
|
||||
return fields
|
||||
|
||||
|
||||
def unprepare_from_saved(call: APICall, tasks_data: Union[Sequence[dict], dict]):
|
||||
if isinstance(tasks_data, dict):
|
||||
tasks_data = [tasks_data]
|
||||
|
||||
conform_output_tags(call, tasks_data)
|
||||
|
||||
for task_data in tasks_data:
|
||||
parameters = safe_get(task_data, "execution/parameters")
|
||||
if parameters is not None:
|
||||
# Escape keys to make them mongo-safe
|
||||
parameters = {
|
||||
ParameterKeyEscaper.unescape(k): v for k, v in parameters.items()
|
||||
}
|
||||
dpath.set(task_data, "execution/parameters", parameters)
|
||||
|
||||
|
||||
def prepare_create_fields(
|
||||
call: APICall, valid_fields=None, output=None, previous_task: Task = None
|
||||
):
|
||||
@@ -239,25 +313,7 @@ def prepare_create_fields(
|
||||
output = Output(destination=output_dest)
|
||||
fields["output"] = output
|
||||
|
||||
conform_tag_fields(call, fields)
|
||||
|
||||
# Strip all script fields (remove leading and trailing whitespace chars) to avoid unusable names and paths
|
||||
for field in task_script_fields:
|
||||
try:
|
||||
path = "script/%s" % field
|
||||
value = dpath.get(fields, path)
|
||||
if isinstance(value, six.string_types):
|
||||
value = value.strip()
|
||||
dpath.set(fields, path, value)
|
||||
except KeyError:
|
||||
pass
|
||||
|
||||
parameters = safe_get(fields, "execution/parameters")
|
||||
if parameters is not None:
|
||||
parameters = {k.strip(): v for k, v in parameters.items()}
|
||||
dpath.set(fields, "execution/parameters", parameters)
|
||||
|
||||
return fields
|
||||
return prepare_for_save(call, fields)
|
||||
|
||||
|
||||
def _validate_and_get_task_from_call(call: APICall, **kwargs):
|
||||
@@ -278,7 +334,9 @@ def validate(call: APICall, company_id, req_model: CreateRequest):
|
||||
_validate_and_get_task_from_call(call)
|
||||
|
||||
|
||||
@endpoint("tasks.create", request_data_model=CreateRequest)
|
||||
@endpoint(
|
||||
"tasks.create", request_data_model=CreateRequest, response_data_model=IdResponse
|
||||
)
|
||||
def create(call: APICall, company_id, req_model: CreateRequest):
|
||||
task = _validate_and_get_task_from_call(call)
|
||||
|
||||
@@ -286,7 +344,26 @@ def create(call: APICall, company_id, req_model: CreateRequest):
|
||||
task.save()
|
||||
update_project_time(task.project)
|
||||
|
||||
call.result.data = {"id": task.id}
|
||||
call.result.data_model = IdResponse(id=task.id)
|
||||
|
||||
|
||||
@endpoint(
|
||||
"tasks.clone", request_data_model=CloneRequest, response_data_model=IdResponse
|
||||
)
|
||||
def clone_task(call: APICall, company_id, request: CloneRequest):
|
||||
task = task_bll.clone_task(
|
||||
company_id=company_id,
|
||||
user_id=call.identity.user,
|
||||
task_id=request.task,
|
||||
name=request.new_task_name,
|
||||
comment=request.new_task_comment,
|
||||
parent=request.new_task_parent,
|
||||
project=request.new_task_project,
|
||||
tags=request.new_task_tags,
|
||||
system_tags=request.new_task_system_tags,
|
||||
execution_overrides=request.execution_overrides,
|
||||
)
|
||||
call.result.data_model = IdResponse(id=task.id)
|
||||
|
||||
|
||||
def prepare_update_fields(call: APICall, task, call_data):
|
||||
@@ -296,8 +373,7 @@ def prepare_update_fields(call: APICall, task, call_data):
|
||||
t_fields = task_fields
|
||||
t_fields.add("output__error")
|
||||
fields = parse_from_call(call_data, update_fields, t_fields)
|
||||
conform_tag_fields(call, fields)
|
||||
return fields, valid_fields
|
||||
return prepare_for_save(call, fields), valid_fields
|
||||
|
||||
|
||||
@endpoint(
|
||||
@@ -324,7 +400,7 @@ def update(call: APICall, company_id, req_model: UpdateRequest):
|
||||
)
|
||||
|
||||
update_project_time(updated_fields.get("project"))
|
||||
conform_output_tags(call, updated_fields)
|
||||
unprepare_from_saved(call, updated_fields)
|
||||
return UpdateResponse(updated=updated_count, fields=updated_fields)
|
||||
|
||||
|
||||
@@ -449,7 +525,7 @@ def edit(call: APICall, company_id, req_model: UpdateRequest):
|
||||
fixed_fields.update(last_update=now)
|
||||
updated = task.update(upsert=False, **fixed_fields)
|
||||
update_project_time(fields.get("project"))
|
||||
conform_output_tags(call, fields)
|
||||
unprepare_from_saved(call, fields)
|
||||
call.result.data_model = UpdateResponse(updated=updated, fields=fields)
|
||||
else:
|
||||
call.result.data_model = UpdateResponse(updated=0)
|
||||
@@ -674,8 +750,7 @@ class CleanupResult(object):
|
||||
deleted_models = attr.ib(type=int)
|
||||
|
||||
|
||||
def cleanup_task(task, force=False):
|
||||
# type: (Task, bool) -> CleanupResult
|
||||
def cleanup_task(task: Task, force: bool = False):
|
||||
"""
|
||||
Validate task deletion and delete/modify all its output.
|
||||
:param task: task object
|
||||
@@ -702,7 +777,7 @@ def cleanup_task(task, force=False):
|
||||
else:
|
||||
updated_models = 0
|
||||
|
||||
event_bll.delete_task_events(task.company, task.id)
|
||||
event_bll.delete_task_events(task.company, task.id, allow_locked=force)
|
||||
|
||||
return CleanupResult(
|
||||
deleted_models=deleted_models,
|
||||
@@ -837,3 +912,18 @@ def ping(_, company_id, request: PingRequest):
|
||||
TaskBLL.set_last_update(
|
||||
task_ids=[request.task], company_id=company_id, last_update=datetime.utcnow()
|
||||
)
|
||||
|
||||
|
||||
@endpoint(
|
||||
"tasks.add_or_update_artifacts",
|
||||
min_version="2.6",
|
||||
request_data_model=AddOrUpdateArtifactsRequest,
|
||||
response_data_model=AddOrUpdateArtifactsResponse,
|
||||
)
|
||||
def add_or_update_artifacts(
|
||||
call: APICall, company_id, request: AddOrUpdateArtifactsRequest
|
||||
):
|
||||
added, updated = TaskBLL.add_or_update_artifacts(
|
||||
task_id=request.task, company_id=company_id, artifacts=request.artifacts
|
||||
)
|
||||
call.result.data_model = AddOrUpdateArtifactsResponse(added=added, updated=updated)
|
||||
|
||||
@@ -7,10 +7,7 @@ from mongoengine import Q
|
||||
|
||||
from apierrors import errors
|
||||
from apimodels.base import UpdateResponse
|
||||
from apimodels.users import (
|
||||
CreateRequest,
|
||||
SetPreferencesRequest,
|
||||
)
|
||||
from apimodels.users import CreateRequest, SetPreferencesRequest
|
||||
from bll.user import UserBLL
|
||||
from config import config
|
||||
from database.errors import translate_errors_context
|
||||
@@ -19,6 +16,7 @@ from database.model.company import Company
|
||||
from database.model.user import User
|
||||
from database.utils import parse_from_call
|
||||
from service_repo import APICall, endpoint
|
||||
from utilities.json import loads, dumps
|
||||
|
||||
log = config.logger(__file__)
|
||||
get_all_query_options = User.QueryParameterOptions(list_fields=("id",))
|
||||
@@ -160,7 +158,10 @@ def update(call, company_id, _):
|
||||
|
||||
def get_user_preferences(call):
|
||||
user_id = call.identity.user
|
||||
return get_user(call, user_id, ["preferences"]).get("preferences", {})
|
||||
preferences = get_user(call, user_id, ["preferences"]).get("preferences")
|
||||
if preferences and isinstance(preferences, str):
|
||||
preferences = loads(preferences)
|
||||
return preferences or {}
|
||||
|
||||
|
||||
@endpoint("users.get_preferences")
|
||||
@@ -169,9 +170,7 @@ def get_preferences(call):
|
||||
return {"preferences": get_user_preferences(call)}
|
||||
|
||||
|
||||
@endpoint(
|
||||
"users.set_preferences", request_data_model=SetPreferencesRequest
|
||||
)
|
||||
@endpoint("users.set_preferences", request_data_model=SetPreferencesRequest)
|
||||
def set_preferences(call, company_id, req_model):
|
||||
# type: (APICall, str, SetPreferencesRequest) -> Dict
|
||||
assert isinstance(call, APICall)
|
||||
@@ -205,9 +204,11 @@ def set_preferences(call, company_id, req_model):
|
||||
updated, fields = 0, {}
|
||||
else:
|
||||
with translate_errors_context("updating user preferences"):
|
||||
fields = dict(preferences=new_preferences)
|
||||
updated = User.objects(id=call.identity.user, company=company_id).update(
|
||||
upsert=False, **fields
|
||||
upsert=False, preferences=dumps(new_preferences)
|
||||
)
|
||||
|
||||
return {"updated": updated, "fields": fields if updated else {}}
|
||||
return {
|
||||
"updated": updated,
|
||||
"fields": {"preferences": new_preferences} if updated else {},
|
||||
}
|
||||
|
||||
@@ -1,14 +1,14 @@
|
||||
import operator
|
||||
from time import sleep
|
||||
|
||||
from typing import Sequence
|
||||
from typing import Sequence, Mapping
|
||||
|
||||
from tests.automated import TestService
|
||||
|
||||
|
||||
class TestEntityOrdering(TestService):
|
||||
test_comment = "Entity ordering test"
|
||||
only_fields = ["id", "started", "comment"]
|
||||
only_fields = ["id", "started", "comment", "execution.parameters"]
|
||||
|
||||
def setUp(self, **kwargs):
|
||||
super().setUp(**kwargs)
|
||||
@@ -27,6 +27,9 @@ class TestEntityOrdering(TestService):
|
||||
# sort by the same field that we use for the search
|
||||
self._assertGetTasksWithOrdering(order_by="comment")
|
||||
|
||||
# sort by parameter which type is not part of db schema
|
||||
self._assertGetTasksWithOrdering(order_by="execution.parameters.test")
|
||||
|
||||
def test_order_with_paging(self):
|
||||
order_field = "started"
|
||||
# all results in one page
|
||||
@@ -52,7 +55,7 @@ class TestEntityOrdering(TestService):
|
||||
def _get_page_tasks(self, order_by, page: int, page_size: int) -> Sequence:
|
||||
return self.api.tasks.get_all_ex(
|
||||
only_fields=self.only_fields,
|
||||
order_by=order_by,
|
||||
order_by=[order_by] if isinstance(order_by, str) else order_by,
|
||||
comment=self.test_comment,
|
||||
page=page,
|
||||
page_size=page_size,
|
||||
@@ -63,12 +66,19 @@ class TestEntityOrdering(TestService):
|
||||
Assert that vals are sorted in the ascending or descending order
|
||||
with None values are always coming from the end
|
||||
"""
|
||||
if None in vals:
|
||||
first_null_idx = vals.index(None)
|
||||
none_tail = vals[first_null_idx:]
|
||||
vals = vals[:first_null_idx]
|
||||
self.assertTrue(all(val is None for val in none_tail))
|
||||
self.assertTrue(all(val is not None for val in vals))
|
||||
empty = [None, "", [], {}]
|
||||
empty_value = None
|
||||
idx = 0
|
||||
for idx, val in enumerate(vals):
|
||||
if val in empty:
|
||||
empty_value = val
|
||||
break
|
||||
|
||||
if idx < len(vals) - 1:
|
||||
none_tail = vals[idx:]
|
||||
vals = vals[:idx]
|
||||
self.assertTrue(all(val == empty_value for val in none_tail))
|
||||
self.assertTrue(all(val != empty_value for val in vals))
|
||||
|
||||
if ascending:
|
||||
cmp = operator.le
|
||||
@@ -76,10 +86,18 @@ class TestEntityOrdering(TestService):
|
||||
cmp = operator.ge
|
||||
self.assertTrue(all(cmp(i, j) for i, j in zip(vals, vals[1:])))
|
||||
|
||||
def _get_value_for_path(self, data: Mapping, field_path: Sequence[str]):
|
||||
val = None
|
||||
for name in field_path:
|
||||
val = data.get(name)
|
||||
data = val if isinstance(val, dict) else {}
|
||||
|
||||
return val
|
||||
|
||||
def _assertGetTasksWithOrdering(self, order_by: str = None, **kwargs):
|
||||
tasks = self.api.tasks.get_all_ex(
|
||||
only_fields=self.only_fields,
|
||||
order_by=order_by,
|
||||
order_by=[order_by] if isinstance(order_by, str) else order_by,
|
||||
comment=self.test_comment,
|
||||
**kwargs,
|
||||
).tasks
|
||||
@@ -87,12 +105,17 @@ class TestEntityOrdering(TestService):
|
||||
if order_by:
|
||||
# test that the output is correctly ordered
|
||||
field_name = order_by if not order_by.startswith("-") else order_by[1:]
|
||||
field_vals = [t.get(field_name) for t in tasks]
|
||||
field_vals = [self._get_value_for_path(t, field_name.split(".")) for t in tasks]
|
||||
self._assertSorted(field_vals, ascending=not order_by.startswith("-"))
|
||||
|
||||
def _create_tasks(self):
|
||||
tasks = [self._temp_task() for _ in range(10)]
|
||||
for _, task in zip(range(5), tasks):
|
||||
tasks = [
|
||||
self._temp_task(
|
||||
**(dict(execution={"parameters": {"test": f"{i}"} if i >= 5 else {}}))
|
||||
)
|
||||
for i in range(10)
|
||||
]
|
||||
for idx, task in zip(range(5), tasks):
|
||||
self.api.tasks.started(task=task)
|
||||
sleep(0.1)
|
||||
return tasks
|
||||
|
||||
@@ -2,83 +2,199 @@
|
||||
Comprehensive test of all(?) use cases of datasets and frames
|
||||
"""
|
||||
import json
|
||||
import time
|
||||
import unittest
|
||||
from functools import partial
|
||||
from statistics import mean
|
||||
from typing import Sequence
|
||||
|
||||
import es_factory
|
||||
from config import config
|
||||
from tests.automated import TestService
|
||||
|
||||
log = config.logger(__file__)
|
||||
|
||||
|
||||
class TestTaskEvents(TestService):
|
||||
def setUp(self, version="1.7"):
|
||||
def setUp(self, version="2.7"):
|
||||
super().setUp(version=version)
|
||||
|
||||
self.created_tasks = []
|
||||
|
||||
self.task = dict(
|
||||
name="test task events",
|
||||
type="training",
|
||||
input=dict(mapping={}, view=dict(entries=[])),
|
||||
def _temp_task(self, name="test task events"):
|
||||
task_input = dict(
|
||||
name=name, type="training", input=dict(mapping={}, view=dict(entries=[])),
|
||||
)
|
||||
res, self.task_id = self.api.send("tasks.create", self.task, extract="id")
|
||||
assert res.meta.result_code == 200
|
||||
self.created_tasks.append(self.task_id)
|
||||
return self.create_temp("tasks", **task_input)
|
||||
|
||||
def tearDown(self):
|
||||
log.info("Cleanup...")
|
||||
for task_id in self.created_tasks:
|
||||
try:
|
||||
self.api.send("tasks.delete", dict(task=task_id, force=True))
|
||||
except Exception as ex:
|
||||
log.exception(ex)
|
||||
|
||||
def create_task_event(self, type, iteration):
|
||||
def _create_task_event(self, type_, task, iteration, **kwargs):
|
||||
return {
|
||||
"worker": "test",
|
||||
"type": type,
|
||||
"task": self.task_id,
|
||||
"type": type_,
|
||||
"task": task,
|
||||
"iter": iteration,
|
||||
"timestamp": es_factory.get_timestamp_millis()
|
||||
"timestamp": es_factory.get_timestamp_millis(),
|
||||
**kwargs,
|
||||
}
|
||||
|
||||
def copy_and_update(self, src_obj, new_data):
|
||||
def _copy_and_update(self, src_obj, new_data):
|
||||
obj = src_obj.copy()
|
||||
obj.update(new_data)
|
||||
return obj
|
||||
|
||||
def test_task_metrics(self):
|
||||
tasks = {
|
||||
self._temp_task(): {
|
||||
"Metric1": ["training_debug_image"],
|
||||
"Metric2": ["training_debug_image", "log"],
|
||||
},
|
||||
self._temp_task(): {"Metric3": ["training_debug_image"]},
|
||||
}
|
||||
events = [
|
||||
self._create_task_event(
|
||||
event_type,
|
||||
task=task,
|
||||
iteration=1,
|
||||
metric=metric,
|
||||
variant="Test variant",
|
||||
)
|
||||
for task, metrics in tasks.items()
|
||||
for metric, event_types in metrics.items()
|
||||
for event_type in event_types
|
||||
]
|
||||
self.send_batch(events)
|
||||
self._assert_task_metrics(tasks, "training_debug_image")
|
||||
self._assert_task_metrics(tasks, "log")
|
||||
self._assert_task_metrics(tasks, "training_stats_scalar")
|
||||
|
||||
def _assert_task_metrics(self, tasks: dict, event_type: str):
|
||||
res = self.api.events.get_task_metrics(tasks=list(tasks), event_type=event_type)
|
||||
for task, metrics in tasks.items():
|
||||
res_metrics = next(
|
||||
(tm.metrics for tm in res.metrics if tm.task == task), ()
|
||||
)
|
||||
self.assertEqual(
|
||||
set(res_metrics),
|
||||
set(
|
||||
metric for metric, events in metrics.items() if event_type in events
|
||||
),
|
||||
)
|
||||
|
||||
def test_task_debug_images(self):
|
||||
task = self._temp_task()
|
||||
metric = "Metric1"
|
||||
variants = [("Variant1", 7), ("Variant2", 4)]
|
||||
iterations = 10
|
||||
|
||||
# test empty
|
||||
res = self.api.events.debug_images(
|
||||
metrics=[{"task": task, "metric": metric}],
|
||||
iters=5,
|
||||
)
|
||||
self.assertFalse(res.metrics)
|
||||
|
||||
# create events
|
||||
events = [
|
||||
self._create_task_event(
|
||||
"training_debug_image",
|
||||
task=task,
|
||||
iteration=n,
|
||||
metric=metric,
|
||||
variant=variant,
|
||||
url=f"{metric}_{variant}_{n % unique_images}",
|
||||
)
|
||||
for n in range(iterations)
|
||||
for (variant, unique_images) in variants
|
||||
]
|
||||
self.send_batch(events)
|
||||
|
||||
# init testing
|
||||
unique_images = [unique for (_, unique) in variants]
|
||||
scroll_id = None
|
||||
assert_debug_images = partial(
|
||||
self._assertDebugImages,
|
||||
task=task,
|
||||
metric=metric,
|
||||
max_iter=iterations - 1,
|
||||
unique_images=unique_images,
|
||||
)
|
||||
|
||||
# test forward navigation
|
||||
for page in range(3):
|
||||
scroll_id = assert_debug_images(scroll_id=scroll_id, page=page)
|
||||
|
||||
# test backwards navigation
|
||||
scroll_id = assert_debug_images(
|
||||
scroll_id=scroll_id, page=0, navigate_earlier=False
|
||||
)
|
||||
|
||||
# beyond the latest iteration and back
|
||||
res = self.api.events.debug_images(
|
||||
metrics=[{"task": task, "metric": metric}],
|
||||
iters=5,
|
||||
scroll_id=scroll_id,
|
||||
navigate_earlier=False,
|
||||
)
|
||||
self.assertEqual(len(res["metrics"][0]["iterations"]), 0)
|
||||
assert_debug_images(scroll_id=scroll_id, page=1)
|
||||
|
||||
# refresh
|
||||
assert_debug_images(scroll_id=scroll_id, page=0, refresh=True)
|
||||
|
||||
def _assertDebugImages(
|
||||
self,
|
||||
task,
|
||||
metric,
|
||||
max_iter: int,
|
||||
unique_images: Sequence[int],
|
||||
scroll_id,
|
||||
page: int,
|
||||
iters: int = 5,
|
||||
**extra_params,
|
||||
):
|
||||
res = self.api.events.debug_images(
|
||||
metrics=[{"task": task, "metric": metric}],
|
||||
iters=iters,
|
||||
scroll_id=scroll_id,
|
||||
**extra_params,
|
||||
)
|
||||
data = res["metrics"][0]
|
||||
self.assertEqual(data["task"], task)
|
||||
self.assertEqual(data["metric"], metric)
|
||||
left_iterations = max(0, max(unique_images) - page * iters)
|
||||
self.assertEqual(len(data["iterations"]), min(iters, left_iterations))
|
||||
for it in data["iterations"]:
|
||||
events_per_iter = sum(
|
||||
1 for unique in unique_images if unique > max_iter - it["iter"]
|
||||
)
|
||||
self.assertEqual(len(it["events"]), events_per_iter)
|
||||
return res.scroll_id
|
||||
|
||||
def test_task_logs(self):
|
||||
events = []
|
||||
for iter in range(10):
|
||||
log_event = self.create_task_event("log", iteration=iter)
|
||||
task = self._temp_task()
|
||||
for iter_ in range(10):
|
||||
log_event = self._create_task_event("log", task, iteration=iter_)
|
||||
events.append(
|
||||
self.copy_and_update(
|
||||
self._copy_and_update(
|
||||
log_event,
|
||||
{"msg": "This is a log message from test task iter " + str(iter)},
|
||||
{"msg": "This is a log message from test task iter " + str(iter_)},
|
||||
)
|
||||
)
|
||||
# sleep so timestamp is not the same
|
||||
import time
|
||||
|
||||
time.sleep(0.01)
|
||||
self.send_batch(events)
|
||||
|
||||
data = self.api.events.get_task_log(task=self.task_id)
|
||||
data = self.api.events.get_task_log(task=task)
|
||||
assert len(data["events"]) == 10
|
||||
|
||||
self.api.tasks.reset(task=self.task_id)
|
||||
data = self.api.events.get_task_log(task=self.task_id)
|
||||
self.api.tasks.reset(task=task)
|
||||
data = self.api.events.get_task_log(task=task)
|
||||
assert len(data["events"]) == 0
|
||||
|
||||
def test_task_metric_value_intervals_keys(self):
|
||||
metric = "Metric1"
|
||||
variant = "Variant1"
|
||||
iter_count = 100
|
||||
task = self._temp_task()
|
||||
events = [
|
||||
{
|
||||
**self.create_task_event("training_stats_scalar", iteration),
|
||||
**self._create_task_event("training_stats_scalar", task, iteration),
|
||||
"metric": metric,
|
||||
"variant": variant,
|
||||
"value": iteration,
|
||||
@@ -88,19 +204,65 @@ class TestTaskEvents(TestService):
|
||||
self.send_batch(events)
|
||||
for key in None, "iter", "timestamp", "iso_time":
|
||||
with self.subTest(key=key):
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=self.task_id, key=key)
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=task, key=key)
|
||||
self.assertIn(metric, data)
|
||||
self.assertIn(variant, data[metric])
|
||||
self.assertIn("x", data[metric][variant])
|
||||
self.assertIn("y", data[metric][variant])
|
||||
|
||||
def test_multitask_events_many_metrics(self):
|
||||
tasks = [
|
||||
self._temp_task(name="test events1"),
|
||||
self._temp_task(name="test events2"),
|
||||
]
|
||||
iter_count = 10
|
||||
metrics_count = 10
|
||||
variants_count = 10
|
||||
events = [
|
||||
{
|
||||
**self._create_task_event("training_stats_scalar", task, iteration),
|
||||
"metric": f"Metric{metric_idx}",
|
||||
"variant": f"Variant{variant_idx}",
|
||||
"value": iteration,
|
||||
}
|
||||
for iteration in range(iter_count)
|
||||
for task in tasks
|
||||
for metric_idx in range(metrics_count)
|
||||
for variant_idx in range(variants_count)
|
||||
]
|
||||
self.send_batch(events)
|
||||
data = self.api.events.multi_task_scalar_metrics_iter_histogram(tasks=tasks)
|
||||
self._assert_metrics_and_variants(
|
||||
data.metrics,
|
||||
metrics=metrics_count,
|
||||
variants=variants_count,
|
||||
tasks=tasks,
|
||||
iterations=iter_count,
|
||||
)
|
||||
|
||||
def _assert_metrics_and_variants(
|
||||
self, data: dict, metrics: int, variants: int, tasks: Sequence, iterations: int
|
||||
):
|
||||
self.assertEqual(len(data), metrics)
|
||||
for m in range(metrics):
|
||||
metric_data = data[f"Metric{m}"]
|
||||
self.assertEqual(len(metric_data), variants)
|
||||
for v in range(variants):
|
||||
variant_data = metric_data[f"Variant{v}"]
|
||||
self.assertEqual(len(variant_data), len(tasks))
|
||||
for t in tasks:
|
||||
task_data = variant_data[t]
|
||||
self.assertEqual(len(task_data["x"]), iterations)
|
||||
self.assertEqual(len(task_data["y"]), iterations)
|
||||
|
||||
def test_task_metric_value_intervals(self):
|
||||
metric = "Metric1"
|
||||
variant = "Variant1"
|
||||
iter_count = 100
|
||||
task = self._temp_task()
|
||||
events = [
|
||||
{
|
||||
**self.create_task_event("training_stats_scalar", iteration),
|
||||
**self._create_task_event("training_stats_scalar", task, iteration),
|
||||
"metric": metric,
|
||||
"variant": variant,
|
||||
"value": iteration,
|
||||
@@ -109,13 +271,13 @@ class TestTaskEvents(TestService):
|
||||
]
|
||||
self.send_batch(events)
|
||||
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=self.task_id)
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=task)
|
||||
self._assert_metrics_histogram(data[metric][variant], iter_count, 100)
|
||||
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=self.task_id, samples=100)
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=task, samples=100)
|
||||
self._assert_metrics_histogram(data[metric][variant], iter_count, 100)
|
||||
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=self.task_id, samples=10)
|
||||
data = self.api.events.scalar_metrics_iter_histogram(task=task, samples=10)
|
||||
self._assert_metrics_histogram(data[metric][variant], iter_count, 10)
|
||||
|
||||
def _assert_metrics_histogram(self, data, iters, samples):
|
||||
@@ -130,7 +292,8 @@ class TestTaskEvents(TestService):
|
||||
)
|
||||
|
||||
def test_task_plots(self):
|
||||
event = self.create_task_event("plot", 0)
|
||||
task = self._temp_task()
|
||||
event = self._create_task_event("plot", task, 0)
|
||||
event["metric"] = "roc"
|
||||
event.update(
|
||||
{
|
||||
@@ -179,7 +342,7 @@ class TestTaskEvents(TestService):
|
||||
)
|
||||
self.send(event)
|
||||
|
||||
event = self.create_task_event("plot", 100)
|
||||
event = self._create_task_event("plot", task, 100)
|
||||
event["metric"] = "confusion"
|
||||
event.update(
|
||||
{
|
||||
@@ -222,11 +385,11 @@ class TestTaskEvents(TestService):
|
||||
)
|
||||
self.send(event)
|
||||
|
||||
data = self.api.events.get_task_plots(task=self.task_id)
|
||||
data = self.api.events.get_task_plots(task=task)
|
||||
assert len(data["plots"]) == 2
|
||||
|
||||
self.api.tasks.reset(task=self.task_id)
|
||||
data = self.api.events.get_task_plots(task=self.task_id)
|
||||
self.api.tasks.reset(task=task)
|
||||
data = self.api.events.get_task_plots(task=task)
|
||||
assert len(data["plots"]) == 0
|
||||
|
||||
def send_batch(self, events):
|
||||
|
||||
@@ -6,6 +6,9 @@ log = config.logger(__file__)
|
||||
|
||||
|
||||
class TestTasksEdit(TestService):
|
||||
def setUp(self, **kwargs):
|
||||
super().setUp(version=2.5)
|
||||
|
||||
def new_task(self, **kwargs):
|
||||
return self.create_temp(
|
||||
"tasks", type="testing", name="test", input=dict(view=dict()), **kwargs
|
||||
@@ -34,3 +37,39 @@ class TestTasksEdit(TestService):
|
||||
self.api.models.edit(model=not_ready_model, ready=False)
|
||||
self.assertFalse(self.api.models.get_by_id(model=not_ready_model).model.ready)
|
||||
self.api.tasks.edit(task=task, execution=dict(model=not_ready_model))
|
||||
|
||||
def test_clone_task(self):
|
||||
script = dict(
|
||||
binary="python",
|
||||
requirements=dict(pip=["six"]),
|
||||
repository="https://example.come/foo/bar",
|
||||
entry_point="test.py",
|
||||
diff="foo",
|
||||
)
|
||||
execution = dict(parameters=dict(test="Test"))
|
||||
tags = ["hello"]
|
||||
system_tags = ["development", "test"]
|
||||
task = self.new_task(
|
||||
script=script, execution=execution, tags=tags, system_tags=system_tags
|
||||
)
|
||||
|
||||
new_name = "new test"
|
||||
new_tags = ["by"]
|
||||
execution_overrides = dict(framework="Caffe")
|
||||
new_task_id = self.api.tasks.clone(
|
||||
task=task,
|
||||
new_task_name=new_name,
|
||||
new_task_tags=new_tags,
|
||||
execution_overrides=execution_overrides,
|
||||
new_task_parent=task,
|
||||
).id
|
||||
new_task = self.api.tasks.get_by_id(task=new_task_id).task
|
||||
self.assertEqual(new_task.name, new_name)
|
||||
self.assertEqual(new_task.type, "testing")
|
||||
self.assertEqual(new_task.tags, new_tags)
|
||||
self.assertEqual(new_task.status, "created")
|
||||
self.assertEqual(new_task.script, script)
|
||||
self.assertEqual(new_task.parent, task)
|
||||
self.assertEqual(new_task.execution.parameters, execution["parameters"])
|
||||
self.assertEqual(new_task.execution.framework, execution_overrides["framework"])
|
||||
self.assertEqual(new_task.system_tags, [])
|
||||
|
||||
@@ -108,7 +108,7 @@ class TestWorkersService(TestService):
|
||||
from_date = to_date - timedelta(days=1)
|
||||
|
||||
# no variants
|
||||
res = self.api.workers.get_statistics(
|
||||
res = self.api.workers.get_stats(
|
||||
items=[
|
||||
dict(key="cpu_usage", aggregation="avg"),
|
||||
dict(key="cpu_usage", aggregation="max"),
|
||||
@@ -142,7 +142,7 @@ class TestWorkersService(TestService):
|
||||
)
|
||||
|
||||
# split by variants
|
||||
res = self.api.workers.get_statistics(
|
||||
res = self.api.workers.get_stats(
|
||||
items=[dict(key="cpu_usage", aggregation="avg")],
|
||||
from_date=from_date.timestamp(),
|
||||
to_date=to_date.timestamp(),
|
||||
@@ -165,7 +165,7 @@ class TestWorkersService(TestService):
|
||||
|
||||
assert all(_check_metric_and_variants(worker) for worker in res["workers"])
|
||||
|
||||
res = self.api.workers.get_statistics(
|
||||
res = self.api.workers.get_stats(
|
||||
items=[dict(key="cpu_usage", aggregation="avg")],
|
||||
from_date=from_date.timestamp(),
|
||||
to_date=to_date.timestamp(),
|
||||
|
||||
@@ -1 +1,2 @@
|
||||
numpy>=1.12.1
|
||||
nose==1.3.7
|
||||
parameterized>=0.7.1
|
||||
|
||||
@@ -8,8 +8,9 @@ import requests
|
||||
from semantic_version import Version
|
||||
|
||||
from config import config
|
||||
from config.info import get_version
|
||||
from database.model.settings import Settings
|
||||
from version import __version__ as current_version
|
||||
from utilities.threads_manager import ThreadsManager
|
||||
|
||||
log = config.logger(__name__)
|
||||
|
||||
@@ -48,7 +49,7 @@ class CheckUpdatesThread(Thread):
|
||||
|
||||
response = requests.get(
|
||||
url,
|
||||
json={"versions": {self.component_name: str(current_version)}, "uid": uid},
|
||||
json={"versions": {self.component_name: str(get_version())}, "uid": uid},
|
||||
timeout=float(
|
||||
config.get("apiserver.check_for_updates.request_timeout_sec", 3.0)
|
||||
),
|
||||
@@ -65,7 +66,7 @@ class CheckUpdatesThread(Thread):
|
||||
if not latest_version:
|
||||
return
|
||||
|
||||
cur_version = Version(current_version)
|
||||
cur_version = Version(get_version())
|
||||
latest_version = Version(latest_version)
|
||||
if cur_version >= latest_version:
|
||||
return
|
||||
@@ -80,7 +81,16 @@ class CheckUpdatesThread(Thread):
|
||||
)
|
||||
|
||||
def _check_updates(self):
|
||||
while True:
|
||||
update_interval_sec = max(
|
||||
float(
|
||||
config.get(
|
||||
"apiserver.check_for_updates.check_interval_sec",
|
||||
60 * 60 * 24,
|
||||
)
|
||||
),
|
||||
60 * 5,
|
||||
)
|
||||
while not ThreadsManager.terminating:
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
response = self._check_new_version_available()
|
||||
@@ -98,17 +108,7 @@ class CheckUpdatesThread(Thread):
|
||||
except Exception:
|
||||
log.exception("Failed obtaining updates")
|
||||
|
||||
sleep(
|
||||
max(
|
||||
float(
|
||||
config.get(
|
||||
"apiserver.check_for_updates.check_interval_sec",
|
||||
60 * 60 * 24,
|
||||
)
|
||||
),
|
||||
60 * 5,
|
||||
)
|
||||
)
|
||||
sleep(update_interval_sec)
|
||||
|
||||
|
||||
check_updates_thread = CheckUpdatesThread()
|
||||
|
||||
@@ -12,6 +12,24 @@ def flatten_nested_items(
|
||||
for key, value in dictionary.items():
|
||||
path = prefix + (key,)
|
||||
if isinstance(value, dict) and nesting != 0:
|
||||
yield from flatten_nested_items(value, next_nesting, include_leaves, prefix=path)
|
||||
yield from flatten_nested_items(
|
||||
value, next_nesting, include_leaves, prefix=path
|
||||
)
|
||||
elif include_leaves is None or key in include_leaves:
|
||||
yield path, value
|
||||
|
||||
|
||||
def deep_merge(source: dict, override: dict) -> dict:
|
||||
"""
|
||||
Merge the override dict into the source in-place
|
||||
Contrary to the dpath.merge the sequences are not expanded
|
||||
If override contains the sequence with the same name as source
|
||||
then the whole sequence in the source is overridden
|
||||
"""
|
||||
for key, value in override.items():
|
||||
if key in source and isinstance(source[key], dict) and isinstance(value, dict):
|
||||
deep_merge(source[key], value)
|
||||
else:
|
||||
source[key] = value
|
||||
|
||||
return source
|
||||
|
||||
@@ -1,10 +1,12 @@
|
||||
from functools import wraps
|
||||
from threading import Lock, Thread
|
||||
from typing import ClassVar
|
||||
|
||||
|
||||
class ThreadsManager:
|
||||
objects = {}
|
||||
lock = Lock()
|
||||
terminating: ClassVar[bool] = False
|
||||
|
||||
def __init__(self, name=None, **threads):
|
||||
super(ThreadsManager, self).__init__()
|
||||
@@ -12,7 +14,7 @@ class ThreadsManager:
|
||||
self.objects = {}
|
||||
self.lock = Lock()
|
||||
|
||||
for name, thread in threads.items():
|
||||
for thread_name, thread in threads.items():
|
||||
if issubclass(thread, Thread):
|
||||
thread = thread()
|
||||
thread.start()
|
||||
@@ -20,9 +22,9 @@ class ThreadsManager:
|
||||
if not thread.is_alive():
|
||||
thread.start()
|
||||
else:
|
||||
raise Exception(f"Expected thread or thread class ({name}): {thread}")
|
||||
raise Exception(f"Expected thread or thread class ({thread_name}): {thread}")
|
||||
|
||||
self.objects[name] = thread
|
||||
self.objects[thread_name] = thread
|
||||
|
||||
def register(self, thread_name, daemon=True):
|
||||
def decorator(f):
|
||||
|
||||
@@ -1 +1 @@
|
||||
__version__ = "0.12.0"
|
||||
__version__ = "0.14.2"
|
||||
|
||||
@@ -2,13 +2,13 @@
|
||||
|
||||
## Introduction
|
||||
|
||||
The webserver is the **trains-server**'s component responsible for serving the TRAINS webapp.
|
||||
The webserver is the **trains-server**'s component responsible for serving the Trains webapp.
|
||||
For this purpose, we use an [NGINX](https://www.nginx.com/) server.
|
||||
|
||||
## Configuration
|
||||
|
||||
In order to serve the TRAINS webapp, the following is required:
|
||||
* The pre-built TRAINS webapp should be copied to the NGINX html directory (usually `/usr/share/nginx/html`)
|
||||
In order to serve the Trains webapp, the following is required:
|
||||
* The pre-built Trains webapp should be copied to the NGINX html directory (usually `/usr/share/nginx/html`)
|
||||
* The default NGINX port (usually `80`) should be changed to match the **trains-server** configuration (usually `8080`)
|
||||
|
||||
NOTE: This configuration may vary in different systems, depending on the NGINX version and distribution used.
|
||||
|
||||
Reference in New Issue
Block a user