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129
README.md
129
README.md
@@ -1,4 +1,4 @@
|
||||
# TRAINS Agent
|
||||
# Allegro Trains Agent
|
||||
## Deep Learning DevOps For Everyone - Now supporting all platforms (Linux, macOS, and Windows)
|
||||
|
||||
"All the Deep-Learning DevOps your research needs, and then some... Because ain't nobody got time for that"
|
||||
@@ -10,27 +10,27 @@
|
||||
|
||||
### Help improve Trains by filling our 2-min [user survey](https://allegro.ai/lp/trains-user-survey/)
|
||||
|
||||
**TRAINS Agent is an AI experiment cluster solution.**
|
||||
**Trains Agent is an AI experiment cluster solution.**
|
||||
|
||||
It is a zero configuration fire-and-forget execution agent, which combined with trains-server provides a full AI cluster solution.
|
||||
|
||||
**Full AutoML in 5 steps**
|
||||
1. Install the [TRAINS server](https://github.com/allegroai/trains-agent) (or use our [open server](https://demoapp.trains.allegro.ai))
|
||||
2. `pip install trains-agent` ([install](#installing-the-trains-agent) the TRAINS agent on any GPU machine: on-premises / cloud / ...)
|
||||
3. Add [TRAINS](https://github.com/allegroai/trains) to your code with just 2 lines & run it once (on your machine / laptop)
|
||||
1. Install the [Trains Server](https://github.com/allegroai/trains-agent) (or use our [open server](https://demoapp.trains.allegro.ai))
|
||||
2. `pip install trains-agent` ([install](#installing-the-trains-agent) the Trains Agent on any GPU machine: on-premises / cloud / ...)
|
||||
3. Add [Trains](https://github.com/allegroai/trains) to your code with just 2 lines & run it once (on your machine / laptop)
|
||||
4. Change the [parameters](#using-the-trains-agent) in the UI & schedule for [execution](#using-the-trains-agent) (or automate with an [AutoML pipeline](#automl-and-orchestration-pipelines-))
|
||||
5. :chart_with_downwards_trend: :chart_with_upwards_trend: :eyes: :beer:
|
||||
|
||||
|
||||
**Using the TRAINS agent, you can now set up a dynamic cluster with \*epsilon DevOps**
|
||||
**Using the Trains Agent, you can now set up a dynamic cluster with \*epsilon DevOps**
|
||||
|
||||
*epsilon - Because we are scientists :triangular_ruler: and nothing is really zero work
|
||||
|
||||
(Experience TRAINS live at [https://demoapp.trains.allegro.ai](https://demoapp.trains.allegro.ai))
|
||||
(Experience Trains live at [https://demoapp.trains.allegro.ai](https://demoapp.trains.allegro.ai))
|
||||
<a href="https://demoapp.trains.allegro.ai"><img src="https://raw.githubusercontent.com/allegroai/trains-agent/9f1e86c1ca45c984ee13edc9353c7b10c55d7257/docs/screenshots.gif" width="100%"></a>
|
||||
|
||||
## Simple, Flexible Experiment Orchestration
|
||||
**The TRAINS Agent was built to address the DL/ML R&D DevOps needs:**
|
||||
**The Trains Agent was built to address the DL/ML R&D DevOps needs:**
|
||||
|
||||
* Easily add & remove machines from the cluster
|
||||
* Reuse machines without the need for any dedicated containers or images
|
||||
@@ -51,30 +51,30 @@ If you are considering K8S for your research, also consider that you will soon b
|
||||
In our experience, handling and building the environments, having to package every experiment in a docker, managing those hundreds (or more) containers and building pipelines on top of it all, is very complicated (also, it’s usually out of scope for the research team, and overwhelming even for the DevOps team).
|
||||
|
||||
We feel there has to be a better way, that can be just as powerful for R&D and at the same time allow integration with K8S **when the need arises**.
|
||||
(If you already have a K8S cluster for AI, detailed instructions on how to integrate TRAINS into your K8S cluster are *coming soon*.)
|
||||
(If you already have a K8S cluster for AI, detailed instructions on how to integrate Trains into your K8S cluster are [here](https://github.com/allegroai/trains-server-k8s/tree/master/trains-server-chart) with included [helm chart](https://github.com/allegroai/trains-server-helm))
|
||||
|
||||
|
||||
## Using the TRAINS Agent
|
||||
## Using the Trains Agent
|
||||
**Full scale HPC with a click of a button**
|
||||
|
||||
TRAINS Agent is a job scheduler that listens on job queue(s), pulls jobs, sets the job environments, executes the job and monitors its progress.
|
||||
The Trains Agent is a job scheduler that listens on job queue(s), pulls jobs, sets the job environments, executes the job and monitors its progress.
|
||||
|
||||
Any 'Draft' experiment can be scheduled for execution by a TRAINS agent.
|
||||
Any 'Draft' experiment can be scheduled for execution by a Trains agent.
|
||||
|
||||
A previously run experiment can be put into 'Draft' state by either of two methods:
|
||||
* Using the **'Reset'** action from the experiment right-click context menu in the
|
||||
TRAINS UI - This will clear any results and artifacts the previous run had created.
|
||||
Trains UI - This will clear any results and artifacts the previous run had created.
|
||||
* Using the **'Clone'** action from the experiment right-click context menu in the
|
||||
TRAINS UI - This will create a new 'Draft' experiment with the same configuration as the original experiment.
|
||||
Trains UI - This will create a new 'Draft' experiment with the same configuration as the original experiment.
|
||||
|
||||
An experiment is scheduled for execution using the **'Enqueue'** action from the experiment
|
||||
right-click context menu in the TRAINS UI and selecting the execution queue.
|
||||
right-click context menu in the Trains UI and selecting the execution queue.
|
||||
|
||||
See [creating an experiment and enqueuing it for execution](#from-scratch).
|
||||
|
||||
Once an experiment is enqueued, it will be picked up and executed by a TRAINS agent monitoring this queue.
|
||||
Once an experiment is enqueued, it will be picked up and executed by a Trains agent monitoring this queue.
|
||||
|
||||
The TRAINS UI Workers & Queues page provides ongoing execution information:
|
||||
The Trains UI Workers & Queues page provides ongoing execution information:
|
||||
- Workers Tab: Monitor you cluster
|
||||
- Review available resources
|
||||
- Monitor machines statistics (CPU / GPU / Disk / Network)
|
||||
@@ -83,16 +83,16 @@ The TRAINS UI Workers & Queues page provides ongoing execution information:
|
||||
- Cancel or abort job execution
|
||||
- Move jobs between execution queues
|
||||
|
||||
### What The TRAINS Agent Actually Does
|
||||
The TRAINS agent executes experiments using the following process:
|
||||
### What The Trains Agent Actually Does
|
||||
The Trains Agent executes experiments using the following process:
|
||||
- Create a new virtual environment (or launch the selected docker image)
|
||||
- Clone the code into the virtual-environment (or inside the docker)
|
||||
- Install python packages based on the package requirements listed for the experiment
|
||||
- Special note for PyTorch: The TRAINS agent will automatically select the
|
||||
- Special note for PyTorch: The Trains Agent will automatically select the
|
||||
torch packages based on the CUDA_VERSION environment variable of the machine
|
||||
- Execute the code, while monitoring the process
|
||||
- Log all stdout/stderr in the TRAINS UI, including the cloning and installation process, for easy debugging
|
||||
- Monitor the execution and allow you to manually abort the job using the TRAINS UI (or, in the unfortunate case of a code crash, catch the error and signal the experiment has failed)
|
||||
- Log all stdout/stderr in the Trains UI, including the cloning and installation process, for easy debugging
|
||||
- Monitor the execution and allow you to manually abort the job using the Trains UI (or, in the unfortunate case of a code crash, catch the error and signal the experiment has failed)
|
||||
|
||||
### System Design & Flow
|
||||
```text
|
||||
@@ -100,24 +100,24 @@ The TRAINS agent executes experiments using the following process:
|
||||
| GPU Machine |
|
||||
Development Machine | |
|
||||
+------------------------+ | +-------------+ |
|
||||
| Data Scientist's | +--------------+ | |TRAINS Agent | |
|
||||
| Data Scientist's | +--------------+ | |Trains Agent | |
|
||||
| DL/ML Code | | WEB UI | | | | |
|
||||
| | | | | | +---------+ | |
|
||||
| | | | | | | DL/ML | | |
|
||||
| | +--------------+ | | | Code | | |
|
||||
| | User Clones Exp #1 / . . . . . . . / | | | | | |
|
||||
| +-------------------+ | into Exp #2 / . . . . . . . / | | +---------+ | |
|
||||
| | TRAINS | | +---------------/-_____________-/ | | | |
|
||||
| | Trains | | +---------------/-_____________-/ | | | |
|
||||
| +---------+---------+ | | | | ^ | |
|
||||
+-----------|------------+ | | +------|------+ |
|
||||
| | +--------|--------+
|
||||
Auto-Magically | |
|
||||
Creates Exp #1 | The TRAINS Agent
|
||||
Creates Exp #1 | The Trains Agent
|
||||
\ User Change Hyper-Parameters Pulls Exp #2, setup the
|
||||
| | environment & clone code.
|
||||
| | Start execution with the
|
||||
+------------|------------+ | +--------------------+ new set of Hyper-Parameters.
|
||||
| +---------v---------+ | | | TRAINS-SERVER | |
|
||||
| +---------v---------+ | | | Trains Server | |
|
||||
| | Experiment #1 | | | | | |
|
||||
| +-------------------+ | | | Execution Queue | |
|
||||
| || | | | | |
|
||||
@@ -128,17 +128,17 @@ Development Machine |
|
||||
| | ------------->---------------+ | |
|
||||
| | User Send Exp #2 | |Execute Exp #2 +--------------------+
|
||||
| | For Execution | +---------------+ |
|
||||
| TRAINS-SERVER | | |
|
||||
| Trains Server | | |
|
||||
+-------------------------+ +--------------------+
|
||||
```
|
||||
|
||||
### Installing the TRAINS Agent
|
||||
### Installing the Trains Agent
|
||||
|
||||
```bash
|
||||
pip install trains-agent
|
||||
```
|
||||
|
||||
### TRAINS Agent Usage Examples
|
||||
### Trains Agent Usage Examples
|
||||
|
||||
Full Interface and capabilities are available with
|
||||
```bash
|
||||
@@ -146,22 +146,22 @@ trains-agent --help
|
||||
trains-agent daemon --help
|
||||
```
|
||||
|
||||
### Configuring the TRAINS Agent
|
||||
### Configuring the Trains Agent
|
||||
|
||||
```bash
|
||||
trains-agent init
|
||||
```
|
||||
|
||||
Note: The TRAINS agent uses a cache folder to cache pip packages, apt packages and cloned repositories. The default TRAINS Agent cache folder is `~/.trains`
|
||||
Note: The Trains Agent uses a cache folder to cache pip packages, apt packages and cloned repositories. The default Trains Agent cache folder is `~/.trains`
|
||||
|
||||
See full details in your configuration file at `~/trains.conf`
|
||||
|
||||
Note: The **TRAINS agent** extends the **TRAINS** configuration file `~/trains.conf`
|
||||
Note: The **Trains agent** extends the **Trains** configuration file `~/trains.conf`
|
||||
They are designed to share the same configuration file, see example [here](docs/trains.conf)
|
||||
|
||||
### Running the TRAINS Agent
|
||||
### Running the Trains Agent
|
||||
|
||||
For debug and experimentation, start the TRAINS agent in `foreground` mode, where all the output is printed to screen
|
||||
For debug and experimentation, start the Trains agent in `foreground` mode, where all the output is printed to screen
|
||||
```bash
|
||||
trains-agent daemon --queue default --foreground
|
||||
```
|
||||
@@ -190,9 +190,9 @@ trains-agent daemon --detached --gpus 0,1 --queue dual_gpu
|
||||
trains-agent daemon --detached --gpus 2,3 --queue dual_gpu
|
||||
```
|
||||
|
||||
#### Starting the TRAINS Agent in docker mode
|
||||
#### Starting the Trains Agent in docker mode
|
||||
|
||||
For debug and experimentation, start the TRAINS agent in `foreground` mode, where all the output is printed to screen
|
||||
For debug and experimentation, start the Trains agent in `foreground` mode, where all the output is printed to screen
|
||||
```bash
|
||||
trains-agent daemon --queue default --docker --foreground
|
||||
```
|
||||
@@ -215,7 +215,7 @@ trains-agent daemon --detached --gpus 0,1 --queue dual_gpu --docker nvidia/cuda
|
||||
trains-agent daemon --detached --gpus 2,3 --queue dual_gpu --docker nvidia/cuda
|
||||
```
|
||||
|
||||
#### Starting the TRAINS Agent - Priority Queues
|
||||
#### Starting the Trains Agent - Priority Queues
|
||||
|
||||
Priority Queues are also supported, example use case:
|
||||
|
||||
@@ -223,14 +223,22 @@ High priority queue: `important_jobs` Low priority queue: `default`
|
||||
```bash
|
||||
trains-agent daemon --queue important_jobs default
|
||||
```
|
||||
The **TRAINS agent** will first try to pull jobs from the `important_jobs` queue, only then it will fetch a job from the `default` queue.
|
||||
The **Trains Agent** will first try to pull jobs from the `important_jobs` queue, only then it will fetch a job from the `default` queue.
|
||||
|
||||
Adding queues, managing job order within a queue and moving jobs between queues, is available using the Web UI, see example on our [open server](https://demoapp.trains.allegro.ai/workers-and-queues/queues)
|
||||
|
||||
# How do I create an experiment on the TRAINS server? <a name="from-scratch"></a>
|
||||
* Integrate [TRAINS](https://github.com/allegroai/trains) with your code
|
||||
#### Stopping the Trains Agent
|
||||
|
||||
To stop a **Trains Agent** running in the background, run the same command line used to start the agent with `--stop` appended.
|
||||
For example, to stop the first of the above shown same machine, single gpu agents:
|
||||
```bash
|
||||
trains-agent daemon --detached --gpus 0 --queue default --docker nvidia/cuda --stop
|
||||
```
|
||||
|
||||
## How do I create an experiment on the Trains Server? <a name="from-scratch"></a>
|
||||
* Integrate [Trains](https://github.com/allegroai/trains) with your code
|
||||
* Execute the code on your machine (Manually / PyCharm / Jupyter Notebook)
|
||||
* As your code is running, **TRAINS** creates an experiment logging all the necessary execution information:
|
||||
* As your code is running, **Trains** creates an experiment logging all the necessary execution information:
|
||||
- Git repository link and commit ID (or an entire jupyter notebook)
|
||||
- Git diff (we’re not saying you never commit and push, but still...)
|
||||
- Python packages used by your code (including specific versions used)
|
||||
@@ -239,7 +247,7 @@ Adding queues, managing job order within a queue and moving jobs between queues,
|
||||
|
||||
You now have a 'template' of your experiment with everything required for automated execution
|
||||
|
||||
* In the TRAINS UI, Right click on the experiment and select 'clone'. A copy of your experiment will be created.
|
||||
* In the Trains UI, Right click on the experiment and select 'clone'. A copy of your experiment will be created.
|
||||
* You now have a new draft experiment cloned from your original experiment, feel free to edit it
|
||||
- Change the Hyper-Parameters
|
||||
- Switch to the latest code base of the repository
|
||||
@@ -248,23 +256,44 @@ Adding queues, managing job order within a queue and moving jobs between queues,
|
||||
- Or simply change nothing to run the same experiment again...
|
||||
* Schedule the newly created experiment for execution: Right-click the experiment and select 'enqueue'
|
||||
|
||||
# AutoML and Orchestration Pipelines <a name="automl-pipes"></a>
|
||||
The TRAINS Agent can also be used to implement AutoML orchestration and Experiment Pipelines in conjunction with the TRAINS package.
|
||||
## Trains-Agent Services Mode <a name="services"></a>
|
||||
|
||||
Sample AutoML & Orchestration examples can be found in the TRAINS [example/automl](https://github.com/allegroai/trains/tree/master/examples/automl) folder.
|
||||
Trains-Agent Services is a special mode of Trains-Agent that provides the ability to launch long-lasting jobs
|
||||
that previously had to be executed on local / dedicated machines. It allows a single agent to
|
||||
launch multiple dockers (Tasks) for different use cases. To name a few use cases, auto-scaler service (spinning instances
|
||||
when the need arises and the budget allows), Controllers (Implementing pipelines and more sophisticated DevOps logic),
|
||||
Optimizer (such as Hyper-parameter Optimization or sweeping), and Application (such as interactive Bokeh apps for
|
||||
increased data transparency)
|
||||
|
||||
Trains-Agent Services mode will spin **any** task enqueued into the specified queue.
|
||||
Every task launched by Trains-Agent Services will be registered as a new node in the system,
|
||||
providing tracking and transparency capabilities.
|
||||
Currently trains-agent in services-mode supports cpu only configuration. Trains-agent services mode can be launched alongside GPU agents.
|
||||
|
||||
```bash
|
||||
trains-agent daemon --services-mode --detached --queue services --create-queue --docker ubuntu:18.04 --cpu-only
|
||||
```
|
||||
|
||||
**Note**: It is the user's responsibility to make sure the proper tasks are pushed into the specified queue.
|
||||
|
||||
|
||||
## AutoML and Orchestration Pipelines <a name="automl-pipes"></a>
|
||||
The Trains Agent can also be used to implement AutoML orchestration and Experiment Pipelines in conjunction with the Trains package.
|
||||
|
||||
Sample AutoML & Orchestration examples can be found in the Trains [example/automation](https://github.com/allegroai/trains/tree/master/examples/automation) folder.
|
||||
|
||||
AutoML examples
|
||||
- [Toy Keras training experiment](https://github.com/allegroai/trains/blob/master/examples/automl/automl_base_template_keras_simple.py)
|
||||
- [Toy Keras training experiment](https://github.com/allegroai/trains/blob/master/examples/optimization/hyper-parameter-optimization/base_template_keras_simple.py)
|
||||
- In order to create an experiment-template in the system, this code must be executed once manually
|
||||
- [Random Search over the above Keras experiment-template](https://github.com/allegroai/trains/blob/master/examples/automl/automl_random_search_example.py)
|
||||
- [Random Search over the above Keras experiment-template](https://github.com/allegroai/trains/blob/master/examples/automation/manual_random_param_search_example.py)
|
||||
- This example will create multiple copies of the Keras experiment-template, with different hyper-parameter combinations
|
||||
|
||||
Experiment Pipeline examples
|
||||
- [First step experiment](https://github.com/allegroai/trains/blob/master/examples/automl/task_piping_example.py)
|
||||
- [First step experiment](https://github.com/allegroai/trains/blob/master/examples/automation/task_piping_example.py)
|
||||
- This example will "process data", and once done, will launch a copy of the 'second step' experiment-template
|
||||
- [Second step experiment](https://github.com/allegroai/trains/blob/master/examples/automl/toy_base_task.py)
|
||||
- [Second step experiment](https://github.com/allegroai/trains/blob/master/examples/automation/toy_base_task.py)
|
||||
- In order to create an experiment-template in the system, this code must be executed once manually
|
||||
|
||||
# License
|
||||
## License
|
||||
|
||||
Apache License, Version 2.0 (see the [LICENSE](https://www.apache.org/licenses/LICENSE-2.0.html) for more information)
|
||||
|
||||
18
docker/agent/Dockerfile
Normal file
18
docker/agent/Dockerfile
Normal file
@@ -0,0 +1,18 @@
|
||||
# syntax = docker/dockerfile
|
||||
FROM nvidia/cuda
|
||||
|
||||
WORKDIR /usr/agent
|
||||
|
||||
COPY . /usr/agent
|
||||
|
||||
RUN apt-get update
|
||||
RUN apt-get dist-upgrade -y
|
||||
RUN apt-get install -y curl python3-pip git
|
||||
RUN curl -sSL https://get.docker.com/ | sh
|
||||
RUN python3 -m pip install -U pip
|
||||
RUN python3 -m pip install trains-agent
|
||||
RUN python3 -m pip install -U "cryptography>=2.9"
|
||||
|
||||
ENV TRAINS_DOCKER_SKIP_GPUS_FLAG=1
|
||||
|
||||
ENTRYPOINT ["/usr/agent/entrypoint.sh"]
|
||||
19
docker/agent/entrypoint.sh
Executable file
19
docker/agent/entrypoint.sh
Executable file
@@ -0,0 +1,19 @@
|
||||
#!/bin/sh
|
||||
|
||||
LOWER_PIP_UPDATE_VERSION="$(echo "$PIP_UPDATE_VERSION" | tr '[:upper:]' '[:lower:]')"
|
||||
LOWER_TRAINS_AGENT_UPDATE_VERSION="$(echo "$TRAINS_AGENT_UPDATE_VERSION" | tr '[:upper:]' '[:lower:]')"
|
||||
|
||||
if [ "$LOWER_PIP_UPDATE_VERSION" = "yes" ] || [ "$LOWER_PIP_UPDATE_VERSION" = "true" ] ; then
|
||||
python3 -m pip install -U pip
|
||||
elif [ ! -z "$LOWER_PIP_UPDATE_VERSION" ] ; then
|
||||
python3 -m pip install pip$LOWER_PIP_UPDATE_VERSION ;
|
||||
fi
|
||||
|
||||
echo "TRAINS_AGENT_UPDATE_VERSION = $LOWER_TRAINS_AGENT_UPDATE_VERSION"
|
||||
if [ "$LOWER_TRAINS_AGENT_UPDATE_VERSION" = "yes" ] || [ "$LOWER_TRAINS_AGENT_UPDATE_VERSION" = "true" ] ; then
|
||||
python3 -m pip install trains-agent -U
|
||||
elif [ ! -z "$LOWER_TRAINS_AGENT_UPDATE_VERSION" ] ; then
|
||||
python3 -m pip install trains-agent$LOWER_TRAINS_AGENT_UPDATE_VERSION ;
|
||||
fi
|
||||
|
||||
python3 -m trains_agent daemon --docker "$TRAINS_AGENT_DEFAULT_BASE_DOCKER" --force-current-version $TRAINS_AGENT_EXTRA_ARGS
|
||||
25
docker/services/Dockerfile
Normal file
25
docker/services/Dockerfile
Normal file
@@ -0,0 +1,25 @@
|
||||
# syntax = docker/dockerfile
|
||||
FROM ubuntu:18.04
|
||||
|
||||
WORKDIR /usr/agent
|
||||
|
||||
COPY . /usr/agent
|
||||
|
||||
ENV LC_ALL=en_US.UTF-8
|
||||
ENV LANG=en_US.UTF-8
|
||||
ENV LANGUAGE=en_US.UTF-8
|
||||
ENV PYTHONIOENCODING=UTF-8
|
||||
|
||||
RUN apt-get update
|
||||
RUN apt-get dist-upgrade -y
|
||||
RUN apt-get install -y locales
|
||||
|
||||
RUN locale-gen en_US.UTF-8
|
||||
|
||||
RUN apt-get install -y curl python3-pip git
|
||||
RUN curl -sSL https://get.docker.com/ | sh
|
||||
RUN python3 -m pip install -U pip
|
||||
RUN python3 -m pip install trains-agent
|
||||
RUN python3 -m pip install -U "cryptography>=2.9"
|
||||
|
||||
ENTRYPOINT ["/usr/agent/entrypoint.sh"]
|
||||
14
docker/services/entrypoint.sh
Executable file
14
docker/services/entrypoint.sh
Executable file
@@ -0,0 +1,14 @@
|
||||
#!/bin/sh
|
||||
|
||||
if [ -z "$TRAINS_FILES_HOST" ]; then
|
||||
TRAINS_HOST_IP=${TRAINS_HOST_IP:-$(curl -s https://ifconfig.me/ip)}
|
||||
fi
|
||||
|
||||
TRAINS_FILES_HOST=${TRAINS_FILES_HOST:-"http://$TRAINS_HOST_IP:8081"}
|
||||
TRAINS_WEB_HOST=${TRAINS_WEB_HOST:-"http://$TRAINS_HOST_IP:8080"}
|
||||
TRAINS_API_HOST=${TRAINS_API_HOST:-"http://$TRAINS_HOST_IP:8008"}
|
||||
|
||||
echo $TRAINS_FILES_HOST $TRAINS_WEB_HOST $TRAINS_API_HOST 1>&2
|
||||
|
||||
python3 -m pip install -q -U "trains-agent${TRAINS_AGENT_UPDATE_VERSION}"
|
||||
trains-agent daemon --services-mode --queue services --create-queue --docker "$TRAINS_AGENT_DEFAULT_BASE_DOCKER" --cpu-only $TRAINS_AGENT_EXTRA_ARGS
|
||||
@@ -13,11 +13,18 @@ api {
|
||||
}
|
||||
|
||||
agent {
|
||||
# Set GIT user/pass credentials
|
||||
# leave blank for GIT SSH credentials
|
||||
# Set GIT user/pass credentials (if user/pass are set, GIT protocol will be set to https)
|
||||
# leave blank for GIT SSH credentials (set force_git_ssh_protocol=true to force SSH protocol)
|
||||
git_user=""
|
||||
git_pass=""
|
||||
# Limit credentials to a single domain, for example: github.com,
|
||||
# all other domains will use public access (no user/pass). Default: always send user/pass for any VCS domain
|
||||
git_host=""
|
||||
|
||||
# Force GIT protocol to use SSH regardless of the git url (Assumes GIT user/pass are blank)
|
||||
force_git_ssh_protocol: false
|
||||
# Force a specific SSH port when converting http to ssh links (the domain is kept the same)
|
||||
# force_git_ssh_port: ""
|
||||
|
||||
# unique name of this worker, if None, created based on hostname:process_id
|
||||
# Overridden with os environment: TRAINS_WORKER_NAME
|
||||
@@ -55,6 +62,24 @@ agent {
|
||||
|
||||
# additional conda channels to use when installing with conda package manager
|
||||
conda_channels: ["pytorch", "conda-forge", ]
|
||||
# conda_full_env_update: false
|
||||
# conda_env_as_base_docker: false
|
||||
|
||||
# set the priority packages to be installed before the rest of the required packages
|
||||
# priority_packages: ["cython", "numpy", "setuptools", ]
|
||||
|
||||
# set the optional priority packages to be installed before the rest of the required packages,
|
||||
# In case a package installation fails, the package will be ignored,
|
||||
# and the virtual environment process will continue
|
||||
# priority_optional_packages: ["pygobject", ]
|
||||
|
||||
# set the post packages to be installed after all the rest of the required packages
|
||||
# post_packages: ["horovod", ]
|
||||
|
||||
# set the optional post packages to be installed after all the rest of the required packages,
|
||||
# In case a package installation fails, the package will be ignored,
|
||||
# and the virtual environment process will continue
|
||||
# post_optional_packages: []
|
||||
|
||||
# set to True to support torch nightly build installation,
|
||||
# notice: torch nightly builds are ephemeral and are deleted from time to time
|
||||
@@ -104,11 +129,16 @@ agent {
|
||||
|
||||
default_docker: {
|
||||
# default docker image to use when running in docker mode
|
||||
image: "nvidia/cuda"
|
||||
image: "nvidia/cuda:10.1-runtime-ubuntu18.04"
|
||||
|
||||
# optional arguments to pass to docker image
|
||||
# arguments: ["--ipc=host"]
|
||||
}
|
||||
|
||||
# CUDA versions used for Conda setup & solving PyTorch wheel packages
|
||||
# it Should be detected automatically. Override with os environment CUDA_VERSION / CUDNN_VERSION
|
||||
# cuda_version: 10.1
|
||||
# cudnn_version: 7.6
|
||||
}
|
||||
|
||||
sdk {
|
||||
@@ -139,6 +169,9 @@ sdk {
|
||||
# X images are stored in the upload destination for each matplotlib plot title.
|
||||
matplotlib_untitled_history_size: 100
|
||||
|
||||
# Limit the number of digits after the dot in plot reporting (reducing plot report size)
|
||||
# plot_max_num_digits: 5
|
||||
|
||||
# Settings for generated debug images
|
||||
images {
|
||||
format: JPEG
|
||||
|
||||
75
examples/k8s_glue_example.py
Normal file
75
examples/k8s_glue_example.py
Normal file
@@ -0,0 +1,75 @@
|
||||
"""
|
||||
This example assumes you have preconfigured services with selectors in the form of
|
||||
"ai.allegro.agent.serial=pod-<number>" and a targetPort of 10022.
|
||||
The K8sIntegration component will label each pod accordingly.
|
||||
"""
|
||||
from argparse import ArgumentParser
|
||||
|
||||
from trains_agent.glue.k8s import K8sIntegration
|
||||
|
||||
|
||||
def parse_args():
|
||||
parser = ArgumentParser()
|
||||
parser.add_argument(
|
||||
"--queue", type=str, help="Queue to pull tasks from"
|
||||
)
|
||||
parser.add_argument(
|
||||
"--ports-mode", action='store_true', default=False,
|
||||
help="Ports-Mode will add a label to the pod which can be used as service, in order to expose ports"
|
||||
)
|
||||
parser.add_argument(
|
||||
"--num-of-services", type=int, default=20,
|
||||
help="Specify the number of k8s services to be used. Use only with ports-mode."
|
||||
)
|
||||
parser.add_argument(
|
||||
"--base-port", type=int,
|
||||
help="Used in conjunction with ports-mode, specifies the base port exposed by the services. "
|
||||
"For pod #X, the port will be <base-port>+X"
|
||||
)
|
||||
parser.add_argument(
|
||||
"--gateway-address", type=str, default=None,
|
||||
help="Used in conjunction with ports-mode, specify the external address of the k8s ingress / ELB"
|
||||
)
|
||||
parser.add_argument(
|
||||
"--pod-trains-conf", type=str,
|
||||
help="Configuration file to be used by the pod itself (if not provided, current configuration is used)"
|
||||
)
|
||||
parser.add_argument(
|
||||
"--overrides-yaml", type=str,
|
||||
help="YAML file containing pod overrides to be used when launching a new pod"
|
||||
)
|
||||
parser.add_argument(
|
||||
"--template-yaml", type=str,
|
||||
help="YAML file containing pod template. If provided pod will be scheduled with kubectl apply "
|
||||
"and overrides are ignored, otherwise it will be scheduled with kubectl run"
|
||||
)
|
||||
parser.add_argument(
|
||||
"--ssh-server-port", type=int, default=0,
|
||||
help="If non-zero, every pod will also start an SSH server on the selected port (default: zero, not active)"
|
||||
)
|
||||
return parser.parse_args()
|
||||
|
||||
|
||||
def main():
|
||||
args = parse_args()
|
||||
|
||||
user_props_cb = None
|
||||
if args.ports_mode and args.base_port:
|
||||
def k8s_user_props_cb(pod_number=0):
|
||||
user_prop = {"k8s-pod-port": args.base_port + pod_number}
|
||||
if args.gateway_address:
|
||||
user_prop["k8s-gateway-address"] = args.gateway_address
|
||||
return user_prop
|
||||
user_props_cb = k8s_user_props_cb
|
||||
|
||||
k8s = K8sIntegration(
|
||||
ports_mode=args.ports_mode, num_of_services=args.num_of_services, user_props_cb=user_props_cb,
|
||||
overrides_yaml=args.overrides_yaml, trains_conf_file=args.pod_trains_conf, template_yaml=args.template_yaml,
|
||||
extra_bash_init_script=K8sIntegration.get_ssh_server_bash(
|
||||
ssh_port_number=args.ssh_server_port) if args.ssh_server_port else None
|
||||
)
|
||||
k8s.k8s_daemon(args.queue)
|
||||
|
||||
|
||||
if __name__ == "__main__":
|
||||
main()
|
||||
@@ -1,22 +1,20 @@
|
||||
attrs>=18.0
|
||||
enum34>=0.9 ; python_version < '3.6'
|
||||
furl>=2.0.0
|
||||
future>=0.16.0
|
||||
humanfriendly>=2.1
|
||||
jsonmodels>=2.2
|
||||
jsonschema>=2.6.0
|
||||
pathlib2>=2.3.0
|
||||
psutil>=3.4.2
|
||||
pyhocon>=0.3.38
|
||||
pyparsing>=2.0.3
|
||||
python-dateutil>=2.4.2
|
||||
pyjwt>=1.6.4
|
||||
PyYAML>=3.12
|
||||
requests-file>=1.4.2
|
||||
requests>=2.20.0
|
||||
requirements_parser>=0.2.0
|
||||
six>=1.11.0
|
||||
tqdm>=4.19.5
|
||||
typing>=3.6.4
|
||||
urllib3>=1.21.1
|
||||
attrs>=18.0,<20.4.0
|
||||
enum34>=0.9,<1.2.0 ; python_version < '3.6'
|
||||
furl>=2.0.0,<2.2.0
|
||||
future>=0.16.0,<0.19.0
|
||||
humanfriendly>=2.1,<9.2
|
||||
jsonschema>=2.6.0,<3.3.0
|
||||
pathlib2>=2.3.0,<2.4.0
|
||||
psutil>=3.4.2,<5.9.0
|
||||
pyhocon>=0.3.38,<0.4.0
|
||||
pyparsing>=2.0.3,<2.5.0
|
||||
python-dateutil>=2.4.2,<2.9.0
|
||||
pyjwt>=1.6.4,<2.0.0
|
||||
PyYAML>=3.12,<5.4.0
|
||||
requests-file>=1.4.2,<1.6.0
|
||||
requests>=2.20.0,<2.26.0
|
||||
six>=1.11.0,<1.16.0
|
||||
tqdm>=4.19.5,<4.55.0
|
||||
typing>=3.6.4,<3.8.0
|
||||
urllib3>=1.21.1,<1.27.0
|
||||
virtualenv>=16,<20
|
||||
|
||||
27
setup.py
27
setup.py
@@ -4,28 +4,31 @@ TRAINS-AGENT DevOps for machine/deep learning
|
||||
https://github.com/allegroai/trains-agent
|
||||
"""
|
||||
|
||||
import os.path
|
||||
# Always prefer setuptools over distutils
|
||||
from setuptools import setup, find_packages
|
||||
from six import exec_
|
||||
from pathlib2 import Path
|
||||
|
||||
def read_text(filepath):
|
||||
with open(filepath, "r") as f:
|
||||
return f.read()
|
||||
|
||||
here = Path(__file__).resolve().parent
|
||||
|
||||
here = os.path.dirname(__file__)
|
||||
# Get the long description from the README file
|
||||
long_description = (here / 'README.md').read_text()
|
||||
long_description = read_text(os.path.join(here, 'README.md'))
|
||||
|
||||
|
||||
def read_version_string():
|
||||
result = {}
|
||||
exec_((here / 'trains_agent/version.py').read_text(), result)
|
||||
return result['__version__']
|
||||
def read_version_string(version_file):
|
||||
for line in read_text(version_file).splitlines():
|
||||
if line.startswith('__version__'):
|
||||
delim = '"' if '"' in line else "'"
|
||||
return line.split(delim)[1]
|
||||
else:
|
||||
raise RuntimeError("Unable to find version string.")
|
||||
|
||||
|
||||
version = read_version_string()
|
||||
|
||||
requirements = (here / 'requirements.txt').read_text().splitlines()
|
||||
version = read_version_string("trains_agent/version.py")
|
||||
|
||||
requirements = read_text(os.path.join(here, 'requirements.txt')).splitlines()
|
||||
|
||||
setup(
|
||||
name='trains_agent',
|
||||
|
||||
@@ -30,6 +30,6 @@ from trains_agent.helper.repo import VCS
|
||||
),
|
||||
)
|
||||
def test(url, expected):
|
||||
result = VCS.resolve_ssh_url(url)
|
||||
result = VCS.replace_ssh_url(url)
|
||||
expected = expected or url
|
||||
assert result == expected
|
||||
|
||||
@@ -9,9 +9,16 @@
|
||||
# worker_name: "trains-agent-machine1"
|
||||
worker_name: ""
|
||||
|
||||
# Set GIT user/pass credentials for cloning code, leave blank for GIT SSH credentials.
|
||||
# Set GIT user/pass credentials (if user/pass are set, GIT protocol will be set to https)
|
||||
# leave blank for GIT SSH credentials (set force_git_ssh_protocol=true to force SSH protocol)
|
||||
# git_user: ""
|
||||
# git_pass: ""
|
||||
# git_host: ""
|
||||
|
||||
# Force GIT protocol to use SSH regardless of the git url (Assumes GIT user/pass are blank)
|
||||
force_git_ssh_protocol: false
|
||||
# Force a specific SSH port when converting http to ssh links (the domain is kept the same)
|
||||
# force_git_ssh_port: 0
|
||||
|
||||
# Set the python version to use when creating the virtual environment and launching the experiment
|
||||
# Example values: "/usr/bin/python3" or "/usr/local/bin/python3.6"
|
||||
@@ -40,6 +47,26 @@
|
||||
# additional conda channels to use when installing with conda package manager
|
||||
conda_channels: ["defaults", "conda-forge", "pytorch", ]
|
||||
|
||||
# If set to true, Task's "installed packages" are ignored,
|
||||
# and the repository's "requirements.txt" is used instead
|
||||
# force_repo_requirements_txt: false
|
||||
|
||||
# set the priority packages to be installed before the rest of the required packages
|
||||
# priority_packages: ["cython", "numpy", "setuptools", ]
|
||||
|
||||
# set the optional priority packages to be installed before the rest of the required packages,
|
||||
# In case a package installation fails, the package will be ignored,
|
||||
# and the virtual environment process will continue
|
||||
# priority_optional_packages: ["pygobject", ]
|
||||
|
||||
# set the post packages to be installed after all the rest of the required packages
|
||||
# post_packages: ["horovod", ]
|
||||
|
||||
# set the optional post packages to be installed after all the rest of the required packages,
|
||||
# In case a package installation fails, the package will be ignored,
|
||||
# and the virtual environment process will continue
|
||||
# post_optional_packages: []
|
||||
|
||||
# set to True to support torch nightly build installation,
|
||||
# notice: torch nightly builds are ephemeral and are deleted from time to time
|
||||
torch_nightly: false,
|
||||
@@ -82,18 +109,55 @@
|
||||
# optional shell script to run in docker when started before the experiment is started
|
||||
# extra_docker_shell_script: ["apt-get install -y bindfs", ]
|
||||
|
||||
# optional uptime configuration, make sure to use only one of 'uptime/downtime' and not both.
|
||||
# If uptime is specified, agent will actively poll (and execute) tasks in the time-spans defined here.
|
||||
# Outside of the specified time-spans, the agent will be idle.
|
||||
# Defined using a list of items of the format: "<hours> <days>".
|
||||
# hours - use values 0-23, single values would count as start hour and end at midnight.
|
||||
# days - use days in abbreviated format (SUN-SAT)
|
||||
# use '-' for ranges and ',' to separate singular values.
|
||||
# for example, to enable the workers every Sunday and Tuesday between 17:00-20:00 set uptime to:
|
||||
# uptime: ["17-20 SUN,TUE"]
|
||||
|
||||
# optional downtime configuration, can be used only when uptime is not used.
|
||||
# If downtime is specified, agent will be idle in the time-spans defined here.
|
||||
# Outside of the specified time-spans, the agent will actively poll (and execute) tasks.
|
||||
# Use the same format as described above for uptime
|
||||
# downtime: []
|
||||
|
||||
# set to true in order to force "docker pull" before running an experiment using a docker image.
|
||||
# This makes sure the docker image is updated.
|
||||
docker_force_pull: false
|
||||
|
||||
default_docker: {
|
||||
# default docker image to use when running in docker mode
|
||||
image: "nvidia/cuda"
|
||||
image: "nvidia/cuda:10.1-runtime-ubuntu18.04"
|
||||
|
||||
# optional arguments to pass to docker image
|
||||
# arguments: ["--ipc=host", ]
|
||||
}
|
||||
|
||||
# set the initial bash script to execute at the startup of any docker.
|
||||
# all lines will be executed regardless of their exit code.
|
||||
# {python_single_digit} is translated to 'python3' or 'python2' according to requested python version
|
||||
# docker_init_bash_script = [
|
||||
# "echo 'Binary::apt::APT::Keep-Downloaded-Packages \"true\";' > /etc/apt/apt.conf.d/docker-clean",
|
||||
# "chown -R root /root/.cache/pip",
|
||||
# "apt-get update",
|
||||
# "apt-get install -y git libsm6 libxext6 libxrender-dev libglib2.0-0",
|
||||
# "(which {python_single_digit} && {python_single_digit} -m pip --version) || apt-get install -y {python_single_digit}-pip",
|
||||
# ]
|
||||
|
||||
# set the preprocessing bash script to execute at the startup of any docker.
|
||||
# all lines will be executed regardless of their exit code.
|
||||
# docker_preprocess_bash_script = [
|
||||
# "echo \"starting docker\"",
|
||||
#]
|
||||
|
||||
# If False replace \r with \n and display full console output
|
||||
# default is True, report a single \r line in a sequence of consecutive lines, per 5 seconds.
|
||||
# suppress_carriage_return: true
|
||||
|
||||
# cuda versions used for solving pytorch wheel packages
|
||||
# should be detected automatically. Override with os environment CUDA_VERSION / CUDNN_VERSION
|
||||
# cuda_version: 10.1
|
||||
|
||||
@@ -31,12 +31,18 @@
|
||||
# X images are stored in the upload destination for each matplotlib plot title.
|
||||
matplotlib_untitled_history_size: 100
|
||||
|
||||
# Limit the number of digits after the dot in plot reporting (reducing plot report size)
|
||||
# plot_max_num_digits: 5
|
||||
|
||||
# Settings for generated debug images
|
||||
images {
|
||||
format: JPEG
|
||||
quality: 87
|
||||
subsampling: 0
|
||||
}
|
||||
|
||||
# Support plot-per-graph fully matching Tensorboard behavior (i.e. if this is set to true, each series should have its own graph)
|
||||
tensorboard_single_series_per_graph: false
|
||||
}
|
||||
|
||||
network {
|
||||
@@ -117,11 +123,11 @@
|
||||
|
||||
log {
|
||||
# debugging feature: set this to true to make null log propagate messages to root logger (so they appear in stdout)
|
||||
null_log_propagate: False
|
||||
null_log_propagate: false
|
||||
task_log_buffer_capacity: 66
|
||||
|
||||
# disable urllib info and lower levels
|
||||
disable_urllib3_info: True
|
||||
disable_urllib3_info: true
|
||||
}
|
||||
|
||||
development {
|
||||
@@ -131,14 +137,30 @@
|
||||
task_reuse_time_window_in_hours: 72.0
|
||||
|
||||
# Run VCS repository detection asynchronously
|
||||
vcs_repo_detect_async: True
|
||||
vcs_repo_detect_async: true
|
||||
|
||||
# Store uncommitted git/hg source code diff in experiment manifest when training in development mode
|
||||
# This stores "git diff" or "hg diff" into the experiment's "script.requirements.diff" section
|
||||
store_uncommitted_code_diff_on_train: True
|
||||
store_uncommitted_code_diff: true
|
||||
|
||||
# Support stopping an experiment in case it was externally stopped, status was changed or task was reset
|
||||
support_stopping: True
|
||||
support_stopping: true
|
||||
|
||||
# Default Task output_uri. if output_uri is not provided to Task.init, default_output_uri will be used instead.
|
||||
default_output_uri: ""
|
||||
|
||||
# Default auto generated requirements optimize for smaller requirements
|
||||
# If True, analyze the entire repository regardless of the entry point.
|
||||
# If False, first analyze the entry point script, if it does not contain other to local files,
|
||||
# do not analyze the entire repository.
|
||||
force_analyze_entire_repo: false
|
||||
|
||||
# If set to true, *trains* update message will not be printed to the console
|
||||
# this value can be overwritten with os environment variable TRAINS_SUPPRESS_UPDATE_MESSAGE=1
|
||||
suppress_update_message: false
|
||||
|
||||
# If this flag is true (default is false), instead of analyzing the code with Pigar, analyze with `pip freeze`
|
||||
detect_with_pip_freeze: false
|
||||
|
||||
# Development mode worker
|
||||
worker {
|
||||
@@ -149,7 +171,11 @@
|
||||
ping_period_sec: 30
|
||||
|
||||
# Log all stdout & stderr
|
||||
log_stdout: True
|
||||
log_stdout: true
|
||||
|
||||
# compatibility feature, report memory usage for the entire machine
|
||||
# default (false), report only on the running process and its sub-processes
|
||||
report_global_mem_used: false
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -8,3 +8,4 @@ ENV_ACCESS_KEY = EnvEntry("TRAINS_API_ACCESS_KEY", "TRAINS_API_ACCESS_KEY")
|
||||
ENV_SECRET_KEY = EnvEntry("TRAINS_API_SECRET_KEY", "TRAINS_API_SECRET_KEY")
|
||||
ENV_VERBOSE = EnvEntry("TRAINS_API_VERBOSE", "TRAINS_API_VERBOSE", type=bool, default=False)
|
||||
ENV_HOST_VERIFY_CERT = EnvEntry("TRAINS_API_HOST_VERIFY_CERT", "TRAINS_API_HOST_VERIFY_CERT", type=bool, default=True)
|
||||
ENV_CONDA_ENV_PACKAGE = EnvEntry("TRAINS_CONDA_ENV_PACKAGE", "TRAINS_CONDA_ENV_PACKAGE")
|
||||
|
||||
9
trains_agent/backend_api/session/jsonmodels/__init__.py
Normal file
9
trains_agent/backend_api/session/jsonmodels/__init__.py
Normal file
@@ -0,0 +1,9 @@
|
||||
# coding: utf-8
|
||||
|
||||
__author__ = 'Szczepan Cieślik'
|
||||
__email__ = 'szczepan.cieslik@gmail.com'
|
||||
__version__ = '2.4'
|
||||
|
||||
from . import models
|
||||
from . import fields
|
||||
from . import errors
|
||||
230
trains_agent/backend_api/session/jsonmodels/builders.py
Normal file
230
trains_agent/backend_api/session/jsonmodels/builders.py
Normal file
@@ -0,0 +1,230 @@
|
||||
"""Builders to generate in memory representation of model and fields tree."""
|
||||
|
||||
from __future__ import absolute_import
|
||||
|
||||
from collections import defaultdict
|
||||
|
||||
import six
|
||||
|
||||
from . import errors
|
||||
from .fields import NotSet
|
||||
|
||||
|
||||
class Builder(object):
|
||||
|
||||
def __init__(self, parent=None, nullable=False, default=NotSet):
|
||||
self.parent = parent
|
||||
self.types_builders = {}
|
||||
self.types_count = defaultdict(int)
|
||||
self.definitions = set()
|
||||
self.nullable = nullable
|
||||
self.default = default
|
||||
|
||||
@property
|
||||
def has_default(self):
|
||||
return self.default is not NotSet
|
||||
|
||||
def register_type(self, type, builder):
|
||||
if self.parent:
|
||||
return self.parent.register_type(type, builder)
|
||||
|
||||
self.types_count[type] += 1
|
||||
if type not in self.types_builders:
|
||||
self.types_builders[type] = builder
|
||||
|
||||
def get_builder(self, type):
|
||||
if self.parent:
|
||||
return self.parent.get_builder(type)
|
||||
|
||||
return self.types_builders[type]
|
||||
|
||||
def count_type(self, type):
|
||||
if self.parent:
|
||||
return self.parent.count_type(type)
|
||||
|
||||
return self.types_count[type]
|
||||
|
||||
@staticmethod
|
||||
def maybe_build(value):
|
||||
return value.build() if isinstance(value, Builder) else value
|
||||
|
||||
def add_definition(self, builder):
|
||||
if self.parent:
|
||||
return self.parent.add_definition(builder)
|
||||
|
||||
self.definitions.add(builder)
|
||||
|
||||
|
||||
class ObjectBuilder(Builder):
|
||||
|
||||
def __init__(self, model_type, *args, **kwargs):
|
||||
super(ObjectBuilder, self).__init__(*args, **kwargs)
|
||||
self.properties = {}
|
||||
self.required = []
|
||||
self.type = model_type
|
||||
|
||||
self.register_type(self.type, self)
|
||||
|
||||
def add_field(self, name, field, schema):
|
||||
_apply_validators_modifications(schema, field)
|
||||
self.properties[name] = schema
|
||||
if field.required:
|
||||
self.required.append(name)
|
||||
|
||||
def build(self):
|
||||
builder = self.get_builder(self.type)
|
||||
if self.is_definition and not self.is_root:
|
||||
self.add_definition(builder)
|
||||
[self.maybe_build(value) for _, value in self.properties.items()]
|
||||
return '#/definitions/{name}'.format(name=self.type_name)
|
||||
else:
|
||||
return builder.build_definition(nullable=self.nullable)
|
||||
|
||||
@property
|
||||
def type_name(self):
|
||||
module_name = '{module}.{name}'.format(
|
||||
module=self.type.__module__,
|
||||
name=self.type.__name__,
|
||||
)
|
||||
return module_name.replace('.', '_').lower()
|
||||
|
||||
def build_definition(self, add_defintitions=True, nullable=False):
|
||||
properties = dict(
|
||||
(name, self.maybe_build(value))
|
||||
for name, value
|
||||
in self.properties.items()
|
||||
)
|
||||
schema = {
|
||||
'type': 'object',
|
||||
'additionalProperties': False,
|
||||
'properties': properties,
|
||||
}
|
||||
if self.required:
|
||||
schema['required'] = self.required
|
||||
if self.definitions and add_defintitions:
|
||||
schema['definitions'] = dict(
|
||||
(builder.type_name, builder.build_definition(False, False))
|
||||
for builder in self.definitions
|
||||
)
|
||||
return schema
|
||||
|
||||
@property
|
||||
def is_definition(self):
|
||||
if self.count_type(self.type) > 1:
|
||||
return True
|
||||
elif self.parent:
|
||||
return self.parent.is_definition
|
||||
else:
|
||||
return False
|
||||
|
||||
@property
|
||||
def is_root(self):
|
||||
return not bool(self.parent)
|
||||
|
||||
|
||||
def _apply_validators_modifications(field_schema, field):
|
||||
for validator in field.validators:
|
||||
try:
|
||||
validator.modify_schema(field_schema)
|
||||
except AttributeError:
|
||||
pass
|
||||
|
||||
|
||||
class PrimitiveBuilder(Builder):
|
||||
|
||||
def __init__(self, type, *args, **kwargs):
|
||||
super(PrimitiveBuilder, self).__init__(*args, **kwargs)
|
||||
self.type = type
|
||||
|
||||
def build(self):
|
||||
schema = {}
|
||||
if issubclass(self.type, six.string_types):
|
||||
obj_type = 'string'
|
||||
elif issubclass(self.type, bool):
|
||||
obj_type = 'boolean'
|
||||
elif issubclass(self.type, int):
|
||||
obj_type = 'number'
|
||||
elif issubclass(self.type, float):
|
||||
obj_type = 'number'
|
||||
else:
|
||||
raise errors.FieldNotSupported(
|
||||
"Can't specify value schema!", self.type
|
||||
)
|
||||
|
||||
if self.nullable:
|
||||
obj_type = [obj_type, 'null']
|
||||
schema['type'] = obj_type
|
||||
|
||||
if self.has_default:
|
||||
schema["default"] = self.default
|
||||
|
||||
return schema
|
||||
|
||||
|
||||
class ListBuilder(Builder):
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
super(ListBuilder, self).__init__(*args, **kwargs)
|
||||
self.schemas = []
|
||||
|
||||
def add_type_schema(self, schema):
|
||||
self.schemas.append(schema)
|
||||
|
||||
def build(self):
|
||||
schema = {'type': 'array'}
|
||||
if self.nullable:
|
||||
self.add_type_schema({'type': 'null'})
|
||||
|
||||
if self.has_default:
|
||||
schema["default"] = [self.to_struct(i) for i in self.default]
|
||||
|
||||
schemas = [self.maybe_build(s) for s in self.schemas]
|
||||
if len(schemas) == 1:
|
||||
items = schemas[0]
|
||||
else:
|
||||
items = {'oneOf': schemas}
|
||||
|
||||
schema['items'] = items
|
||||
return schema
|
||||
|
||||
@property
|
||||
def is_definition(self):
|
||||
return self.parent.is_definition
|
||||
|
||||
@staticmethod
|
||||
def to_struct(item):
|
||||
from .models import Base
|
||||
if isinstance(item, Base):
|
||||
return item.to_struct()
|
||||
return item
|
||||
|
||||
|
||||
class EmbeddedBuilder(Builder):
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
super(EmbeddedBuilder, self).__init__(*args, **kwargs)
|
||||
self.schemas = []
|
||||
|
||||
def add_type_schema(self, schema):
|
||||
self.schemas.append(schema)
|
||||
|
||||
def build(self):
|
||||
if self.nullable:
|
||||
self.add_type_schema({'type': 'null'})
|
||||
|
||||
schemas = [self.maybe_build(schema) for schema in self.schemas]
|
||||
if len(schemas) == 1:
|
||||
schema = schemas[0]
|
||||
else:
|
||||
schema = {'oneOf': schemas}
|
||||
|
||||
if self.has_default:
|
||||
# The default value of EmbeddedField is expected to be an instance
|
||||
# of a subclass of models.Base, thus have `to_struct`
|
||||
schema["default"] = self.default.to_struct()
|
||||
|
||||
return schema
|
||||
|
||||
@property
|
||||
def is_definition(self):
|
||||
return self.parent.is_definition
|
||||
21
trains_agent/backend_api/session/jsonmodels/collections.py
Normal file
21
trains_agent/backend_api/session/jsonmodels/collections.py
Normal file
@@ -0,0 +1,21 @@
|
||||
|
||||
|
||||
class ModelCollection(list):
|
||||
|
||||
"""`ModelCollection` is list which validates stored values.
|
||||
|
||||
Validation is made with use of field passed to `__init__` at each point,
|
||||
when new value is assigned.
|
||||
|
||||
"""
|
||||
|
||||
def __init__(self, field):
|
||||
self.field = field
|
||||
|
||||
def append(self, value):
|
||||
self.field.validate_single_value(value)
|
||||
super(ModelCollection, self).append(value)
|
||||
|
||||
def __setitem__(self, key, value):
|
||||
self.field.validate_single_value(value)
|
||||
super(ModelCollection, self).__setitem__(key, value)
|
||||
15
trains_agent/backend_api/session/jsonmodels/errors.py
Normal file
15
trains_agent/backend_api/session/jsonmodels/errors.py
Normal file
@@ -0,0 +1,15 @@
|
||||
|
||||
|
||||
class ValidationError(RuntimeError):
|
||||
|
||||
pass
|
||||
|
||||
|
||||
class FieldNotFound(RuntimeError):
|
||||
|
||||
pass
|
||||
|
||||
|
||||
class FieldNotSupported(ValueError):
|
||||
|
||||
pass
|
||||
488
trains_agent/backend_api/session/jsonmodels/fields.py
Normal file
488
trains_agent/backend_api/session/jsonmodels/fields.py
Normal file
@@ -0,0 +1,488 @@
|
||||
import datetime
|
||||
import re
|
||||
from weakref import WeakKeyDictionary
|
||||
|
||||
import six
|
||||
from dateutil.parser import parse
|
||||
|
||||
from .errors import ValidationError
|
||||
from .collections import ModelCollection
|
||||
|
||||
|
||||
# unique marker for "no default value specified". None is not good enough since
|
||||
# it is a completely valid default value.
|
||||
NotSet = object()
|
||||
|
||||
|
||||
class BaseField(object):
|
||||
|
||||
"""Base class for all fields."""
|
||||
|
||||
types = None
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
required=False,
|
||||
nullable=False,
|
||||
help_text=None,
|
||||
validators=None,
|
||||
default=NotSet,
|
||||
name=None):
|
||||
self.memory = WeakKeyDictionary()
|
||||
self.required = required
|
||||
self.help_text = help_text
|
||||
self.nullable = nullable
|
||||
self._assign_validators(validators)
|
||||
self.name = name
|
||||
self._validate_name()
|
||||
if default is not NotSet:
|
||||
self.validate(default)
|
||||
self._default = default
|
||||
|
||||
@property
|
||||
def has_default(self):
|
||||
return self._default is not NotSet
|
||||
|
||||
def _assign_validators(self, validators):
|
||||
if validators and not isinstance(validators, list):
|
||||
validators = [validators]
|
||||
self.validators = validators or []
|
||||
|
||||
def __set__(self, instance, value):
|
||||
self._finish_initialization(type(instance))
|
||||
value = self.parse_value(value)
|
||||
self.validate(value)
|
||||
self.memory[instance._cache_key] = value
|
||||
|
||||
def __get__(self, instance, owner=None):
|
||||
if instance is None:
|
||||
self._finish_initialization(owner)
|
||||
return self
|
||||
|
||||
self._finish_initialization(type(instance))
|
||||
|
||||
self._check_value(instance)
|
||||
return self.memory[instance._cache_key]
|
||||
|
||||
def _finish_initialization(self, owner):
|
||||
pass
|
||||
|
||||
def _check_value(self, obj):
|
||||
if obj._cache_key not in self.memory:
|
||||
self.__set__(obj, self.get_default_value())
|
||||
|
||||
def validate_for_object(self, obj):
|
||||
value = self.__get__(obj)
|
||||
self.validate(value)
|
||||
|
||||
def validate(self, value):
|
||||
self._check_types()
|
||||
self._validate_against_types(value)
|
||||
self._check_against_required(value)
|
||||
self._validate_with_custom_validators(value)
|
||||
|
||||
def _check_against_required(self, value):
|
||||
if value is None and self.required:
|
||||
raise ValidationError('Field is required!')
|
||||
|
||||
def _validate_against_types(self, value):
|
||||
if value is not None and not isinstance(value, self.types):
|
||||
raise ValidationError(
|
||||
'Value is wrong, expected type "{types}"'.format(
|
||||
types=', '.join([t.__name__ for t in self.types])
|
||||
),
|
||||
value,
|
||||
)
|
||||
|
||||
def _check_types(self):
|
||||
if self.types is None:
|
||||
raise ValidationError(
|
||||
'Field "{type}" is not usable, try '
|
||||
'different field type.'.format(type=type(self).__name__))
|
||||
|
||||
def to_struct(self, value):
|
||||
"""Cast value to Python structure."""
|
||||
return value
|
||||
|
||||
def parse_value(self, value):
|
||||
"""Parse value from primitive to desired format.
|
||||
|
||||
Each field can parse value to form it wants it to be (like string or
|
||||
int).
|
||||
|
||||
"""
|
||||
return value
|
||||
|
||||
def _validate_with_custom_validators(self, value):
|
||||
if value is None and self.nullable:
|
||||
return
|
||||
|
||||
for validator in self.validators:
|
||||
try:
|
||||
validator.validate(value)
|
||||
except AttributeError:
|
||||
validator(value)
|
||||
|
||||
def get_default_value(self):
|
||||
"""Get default value for field.
|
||||
|
||||
Each field can specify its default.
|
||||
|
||||
"""
|
||||
return self._default if self.has_default else None
|
||||
|
||||
def _validate_name(self):
|
||||
if self.name is None:
|
||||
return
|
||||
if not re.match('^[A-Za-z_](([\w\-]*)?\w+)?$', self.name):
|
||||
raise ValueError('Wrong name', self.name)
|
||||
|
||||
def structue_name(self, default):
|
||||
return self.name if self.name is not None else default
|
||||
|
||||
|
||||
class StringField(BaseField):
|
||||
|
||||
"""String field."""
|
||||
|
||||
types = six.string_types
|
||||
|
||||
|
||||
class IntField(BaseField):
|
||||
|
||||
"""Integer field."""
|
||||
|
||||
types = (int,)
|
||||
|
||||
def parse_value(self, value):
|
||||
"""Cast value to `int`, e.g. from string or long"""
|
||||
parsed = super(IntField, self).parse_value(value)
|
||||
if parsed is None:
|
||||
return parsed
|
||||
return int(parsed)
|
||||
|
||||
|
||||
class FloatField(BaseField):
|
||||
|
||||
"""Float field."""
|
||||
|
||||
types = (float, int)
|
||||
|
||||
|
||||
class BoolField(BaseField):
|
||||
|
||||
"""Bool field."""
|
||||
|
||||
types = (bool,)
|
||||
|
||||
def parse_value(self, value):
|
||||
"""Cast value to `bool`."""
|
||||
parsed = super(BoolField, self).parse_value(value)
|
||||
return bool(parsed) if parsed is not None else None
|
||||
|
||||
|
||||
class ListField(BaseField):
|
||||
|
||||
"""List field."""
|
||||
|
||||
types = (list,)
|
||||
|
||||
def __init__(self, items_types=None, *args, **kwargs):
|
||||
"""Init.
|
||||
|
||||
`ListField` is **always not required**. If you want to control number
|
||||
of items use validators.
|
||||
|
||||
"""
|
||||
self._assign_types(items_types)
|
||||
super(ListField, self).__init__(*args, **kwargs)
|
||||
self.required = False
|
||||
|
||||
def get_default_value(self):
|
||||
default = super(ListField, self).get_default_value()
|
||||
if default is None:
|
||||
return ModelCollection(self)
|
||||
return default
|
||||
|
||||
def _assign_types(self, items_types):
|
||||
if items_types:
|
||||
try:
|
||||
self.items_types = tuple(items_types)
|
||||
except TypeError:
|
||||
self.items_types = items_types,
|
||||
else:
|
||||
self.items_types = tuple()
|
||||
|
||||
types = []
|
||||
for type_ in self.items_types:
|
||||
if isinstance(type_, six.string_types):
|
||||
types.append(_LazyType(type_))
|
||||
else:
|
||||
types.append(type_)
|
||||
self.items_types = tuple(types)
|
||||
|
||||
def validate(self, value):
|
||||
super(ListField, self).validate(value)
|
||||
|
||||
if len(self.items_types) == 0:
|
||||
return
|
||||
|
||||
for item in value:
|
||||
self.validate_single_value(item)
|
||||
|
||||
def validate_single_value(self, item):
|
||||
if len(self.items_types) == 0:
|
||||
return
|
||||
|
||||
if not isinstance(item, self.items_types):
|
||||
raise ValidationError(
|
||||
'All items must be instances '
|
||||
'of "{types}", and not "{type}".'.format(
|
||||
types=', '.join([t.__name__ for t in self.items_types]),
|
||||
type=type(item).__name__,
|
||||
))
|
||||
|
||||
def parse_value(self, values):
|
||||
"""Cast value to proper collection."""
|
||||
result = self.get_default_value()
|
||||
|
||||
if not values:
|
||||
return result
|
||||
|
||||
if not isinstance(values, list):
|
||||
return values
|
||||
|
||||
return [self._cast_value(value) for value in values]
|
||||
|
||||
def _cast_value(self, value):
|
||||
if isinstance(value, self.items_types):
|
||||
return value
|
||||
else:
|
||||
if len(self.items_types) != 1:
|
||||
tpl = 'Cannot decide which type to choose from "{types}".'
|
||||
raise ValidationError(
|
||||
tpl.format(
|
||||
types=', '.join([t.__name__ for t in self.items_types])
|
||||
)
|
||||
)
|
||||
return self.items_types[0](**value)
|
||||
|
||||
def _finish_initialization(self, owner):
|
||||
super(ListField, self)._finish_initialization(owner)
|
||||
|
||||
types = []
|
||||
for type in self.items_types:
|
||||
if isinstance(type, _LazyType):
|
||||
types.append(type.evaluate(owner))
|
||||
else:
|
||||
types.append(type)
|
||||
self.items_types = tuple(types)
|
||||
|
||||
def _elem_to_struct(self, value):
|
||||
try:
|
||||
return value.to_struct()
|
||||
except AttributeError:
|
||||
return value
|
||||
|
||||
def to_struct(self, values):
|
||||
return [self._elem_to_struct(v) for v in values]
|
||||
|
||||
|
||||
class EmbeddedField(BaseField):
|
||||
|
||||
"""Field for embedded models."""
|
||||
|
||||
def __init__(self, model_types, *args, **kwargs):
|
||||
self._assign_model_types(model_types)
|
||||
super(EmbeddedField, self).__init__(*args, **kwargs)
|
||||
|
||||
def _assign_model_types(self, model_types):
|
||||
if not isinstance(model_types, (list, tuple)):
|
||||
model_types = (model_types,)
|
||||
|
||||
types = []
|
||||
for type_ in model_types:
|
||||
if isinstance(type_, six.string_types):
|
||||
types.append(_LazyType(type_))
|
||||
else:
|
||||
types.append(type_)
|
||||
self.types = tuple(types)
|
||||
|
||||
def _finish_initialization(self, owner):
|
||||
super(EmbeddedField, self)._finish_initialization(owner)
|
||||
|
||||
types = []
|
||||
for type in self.types:
|
||||
if isinstance(type, _LazyType):
|
||||
types.append(type.evaluate(owner))
|
||||
else:
|
||||
types.append(type)
|
||||
self.types = tuple(types)
|
||||
|
||||
def validate(self, value):
|
||||
super(EmbeddedField, self).validate(value)
|
||||
try:
|
||||
value.validate()
|
||||
except AttributeError:
|
||||
pass
|
||||
|
||||
def parse_value(self, value):
|
||||
"""Parse value to proper model type."""
|
||||
if not isinstance(value, dict):
|
||||
return value
|
||||
|
||||
embed_type = self._get_embed_type()
|
||||
return embed_type(**value)
|
||||
|
||||
def _get_embed_type(self):
|
||||
if len(self.types) != 1:
|
||||
raise ValidationError(
|
||||
'Cannot decide which type to choose from "{types}".'.format(
|
||||
types=', '.join([t.__name__ for t in self.types])
|
||||
)
|
||||
)
|
||||
return self.types[0]
|
||||
|
||||
def to_struct(self, value):
|
||||
return value.to_struct()
|
||||
|
||||
|
||||
class _LazyType(object):
|
||||
|
||||
def __init__(self, path):
|
||||
self.path = path
|
||||
|
||||
def evaluate(self, base_cls):
|
||||
module, type_name = _evaluate_path(self.path, base_cls)
|
||||
return _import(module, type_name)
|
||||
|
||||
|
||||
def _evaluate_path(relative_path, base_cls):
|
||||
base_module = base_cls.__module__
|
||||
|
||||
modules = _get_modules(relative_path, base_module)
|
||||
|
||||
type_name = modules.pop()
|
||||
module = '.'.join(modules)
|
||||
if not module:
|
||||
module = base_module
|
||||
return module, type_name
|
||||
|
||||
|
||||
def _get_modules(relative_path, base_module):
|
||||
canonical_path = relative_path.lstrip('.')
|
||||
canonical_modules = canonical_path.split('.')
|
||||
|
||||
if not relative_path.startswith('.'):
|
||||
return canonical_modules
|
||||
|
||||
parents_amount = len(relative_path) - len(canonical_path)
|
||||
parent_modules = base_module.split('.')
|
||||
parents_amount = max(0, parents_amount - 1)
|
||||
if parents_amount > len(parent_modules):
|
||||
raise ValueError("Can't evaluate path '{}'".format(relative_path))
|
||||
return parent_modules[:parents_amount * -1] + canonical_modules
|
||||
|
||||
|
||||
def _import(module_name, type_name):
|
||||
module = __import__(module_name, fromlist=[type_name])
|
||||
try:
|
||||
return getattr(module, type_name)
|
||||
except AttributeError:
|
||||
raise ValueError(
|
||||
"Can't find type '{}.{}'.".format(module_name, type_name))
|
||||
|
||||
|
||||
class TimeField(StringField):
|
||||
|
||||
"""Time field."""
|
||||
|
||||
types = (datetime.time,)
|
||||
|
||||
def __init__(self, str_format=None, *args, **kwargs):
|
||||
"""Init.
|
||||
|
||||
:param str str_format: Format to cast time to (if `None` - casting to
|
||||
ISO 8601 format).
|
||||
|
||||
"""
|
||||
self.str_format = str_format
|
||||
super(TimeField, self).__init__(*args, **kwargs)
|
||||
|
||||
def to_struct(self, value):
|
||||
"""Cast `time` object to string."""
|
||||
if self.str_format:
|
||||
return value.strftime(self.str_format)
|
||||
return value.isoformat()
|
||||
|
||||
def parse_value(self, value):
|
||||
"""Parse string into instance of `time`."""
|
||||
if value is None:
|
||||
return value
|
||||
if isinstance(value, datetime.time):
|
||||
return value
|
||||
return parse(value).timetz()
|
||||
|
||||
|
||||
class DateField(StringField):
|
||||
|
||||
"""Date field."""
|
||||
|
||||
types = (datetime.date,)
|
||||
default_format = '%Y-%m-%d'
|
||||
|
||||
def __init__(self, str_format=None, *args, **kwargs):
|
||||
"""Init.
|
||||
|
||||
:param str str_format: Format to cast date to (if `None` - casting to
|
||||
%Y-%m-%d format).
|
||||
|
||||
"""
|
||||
self.str_format = str_format
|
||||
super(DateField, self).__init__(*args, **kwargs)
|
||||
|
||||
def to_struct(self, value):
|
||||
"""Cast `date` object to string."""
|
||||
if self.str_format:
|
||||
return value.strftime(self.str_format)
|
||||
return value.strftime(self.default_format)
|
||||
|
||||
def parse_value(self, value):
|
||||
"""Parse string into instance of `date`."""
|
||||
if value is None:
|
||||
return value
|
||||
if isinstance(value, datetime.date):
|
||||
return value
|
||||
return parse(value).date()
|
||||
|
||||
|
||||
class DateTimeField(StringField):
|
||||
|
||||
"""Datetime field."""
|
||||
|
||||
types = (datetime.datetime,)
|
||||
|
||||
def __init__(self, str_format=None, *args, **kwargs):
|
||||
"""Init.
|
||||
|
||||
:param str str_format: Format to cast datetime to (if `None` - casting
|
||||
to ISO 8601 format).
|
||||
|
||||
"""
|
||||
self.str_format = str_format
|
||||
super(DateTimeField, self).__init__(*args, **kwargs)
|
||||
|
||||
def to_struct(self, value):
|
||||
"""Cast `datetime` object to string."""
|
||||
if self.str_format:
|
||||
return value.strftime(self.str_format)
|
||||
return value.isoformat()
|
||||
|
||||
def parse_value(self, value):
|
||||
"""Parse string into instance of `datetime`."""
|
||||
if isinstance(value, datetime.datetime):
|
||||
return value
|
||||
if value:
|
||||
return parse(value)
|
||||
else:
|
||||
return None
|
||||
154
trains_agent/backend_api/session/jsonmodels/models.py
Normal file
154
trains_agent/backend_api/session/jsonmodels/models.py
Normal file
@@ -0,0 +1,154 @@
|
||||
import six
|
||||
|
||||
from . import parsers, errors
|
||||
from .fields import BaseField
|
||||
from .errors import ValidationError
|
||||
|
||||
|
||||
class JsonmodelMeta(type):
|
||||
|
||||
def __new__(cls, name, bases, attributes):
|
||||
cls.validate_fields(attributes)
|
||||
return super(cls, cls).__new__(cls, name, bases, attributes)
|
||||
|
||||
@staticmethod
|
||||
def validate_fields(attributes):
|
||||
fields = {
|
||||
key: value for key, value in attributes.items()
|
||||
if isinstance(value, BaseField)
|
||||
}
|
||||
taken_names = set()
|
||||
for name, field in fields.items():
|
||||
structue_name = field.structue_name(name)
|
||||
if structue_name in taken_names:
|
||||
raise ValueError('Name taken', structue_name, name)
|
||||
taken_names.add(structue_name)
|
||||
|
||||
|
||||
class Base(six.with_metaclass(JsonmodelMeta, object)):
|
||||
|
||||
"""Base class for all models."""
|
||||
|
||||
def __init__(self, **kwargs):
|
||||
self._cache_key = _CacheKey()
|
||||
self.populate(**kwargs)
|
||||
|
||||
def populate(self, **values):
|
||||
"""Populate values to fields. Skip non-existing."""
|
||||
values = values.copy()
|
||||
fields = list(self.iterate_with_name())
|
||||
for _, structure_name, field in fields:
|
||||
if structure_name in values:
|
||||
field.__set__(self, values.pop(structure_name))
|
||||
for name, _, field in fields:
|
||||
if name in values:
|
||||
field.__set__(self, values.pop(name))
|
||||
|
||||
def get_field(self, field_name):
|
||||
"""Get field associated with given attribute."""
|
||||
for attr_name, field in self:
|
||||
if field_name == attr_name:
|
||||
return field
|
||||
|
||||
raise errors.FieldNotFound('Field not found', field_name)
|
||||
|
||||
def __iter__(self):
|
||||
"""Iterate through fields and values."""
|
||||
for name, field in self.iterate_over_fields():
|
||||
yield name, field
|
||||
|
||||
def validate(self):
|
||||
"""Explicitly validate all the fields."""
|
||||
for name, field in self:
|
||||
try:
|
||||
field.validate_for_object(self)
|
||||
except ValidationError as error:
|
||||
raise ValidationError(
|
||||
"Error for field '{name}'.".format(name=name),
|
||||
error,
|
||||
)
|
||||
|
||||
@classmethod
|
||||
def iterate_over_fields(cls):
|
||||
"""Iterate through fields as `(attribute_name, field_instance)`."""
|
||||
for attr in dir(cls):
|
||||
clsattr = getattr(cls, attr)
|
||||
if isinstance(clsattr, BaseField):
|
||||
yield attr, clsattr
|
||||
|
||||
@classmethod
|
||||
def iterate_with_name(cls):
|
||||
"""Iterate over fields, but also give `structure_name`.
|
||||
|
||||
Format is `(attribute_name, structue_name, field_instance)`.
|
||||
Structure name is name under which value is seen in structure and
|
||||
schema (in primitives) and only there.
|
||||
"""
|
||||
for attr_name, field in cls.iterate_over_fields():
|
||||
structure_name = field.structue_name(attr_name)
|
||||
yield attr_name, structure_name, field
|
||||
|
||||
def to_struct(self):
|
||||
"""Cast model to Python structure."""
|
||||
return parsers.to_struct(self)
|
||||
|
||||
@classmethod
|
||||
def to_json_schema(cls):
|
||||
"""Generate JSON schema for model."""
|
||||
return parsers.to_json_schema(cls)
|
||||
|
||||
def __repr__(self):
|
||||
attrs = {}
|
||||
for name, _ in self:
|
||||
try:
|
||||
attr = getattr(self, name)
|
||||
if attr is not None:
|
||||
attrs[name] = repr(attr)
|
||||
except ValidationError:
|
||||
pass
|
||||
|
||||
return '{class_name}({fields})'.format(
|
||||
class_name=self.__class__.__name__,
|
||||
fields=', '.join(
|
||||
'{0[0]}={0[1]}'.format(x) for x in sorted(attrs.items())
|
||||
),
|
||||
)
|
||||
|
||||
def __str__(self):
|
||||
return '{name} object'.format(name=self.__class__.__name__)
|
||||
|
||||
def __setattr__(self, name, value):
|
||||
try:
|
||||
return super(Base, self).__setattr__(name, value)
|
||||
except ValidationError as error:
|
||||
raise ValidationError(
|
||||
"Error for field '{name}'.".format(name=name),
|
||||
error
|
||||
)
|
||||
|
||||
def __eq__(self, other):
|
||||
if type(other) is not type(self):
|
||||
return False
|
||||
|
||||
for name, _ in self.iterate_over_fields():
|
||||
try:
|
||||
our = getattr(self, name)
|
||||
except errors.ValidationError:
|
||||
our = None
|
||||
|
||||
try:
|
||||
their = getattr(other, name)
|
||||
except errors.ValidationError:
|
||||
their = None
|
||||
|
||||
if our != their:
|
||||
return False
|
||||
|
||||
return True
|
||||
|
||||
def __ne__(self, other):
|
||||
return not (self == other)
|
||||
|
||||
|
||||
class _CacheKey(object):
|
||||
"""Object to identify model in memory."""
|
||||
106
trains_agent/backend_api/session/jsonmodels/parsers.py
Normal file
106
trains_agent/backend_api/session/jsonmodels/parsers.py
Normal file
@@ -0,0 +1,106 @@
|
||||
"""Parsers to change model structure into different ones."""
|
||||
import inspect
|
||||
|
||||
from . import fields, builders, errors
|
||||
|
||||
|
||||
def to_struct(model):
|
||||
"""Cast instance of model to python structure.
|
||||
|
||||
:param model: Model to be casted.
|
||||
:rtype: ``dict``
|
||||
|
||||
"""
|
||||
model.validate()
|
||||
|
||||
resp = {}
|
||||
for _, name, field in model.iterate_with_name():
|
||||
value = field.__get__(model)
|
||||
if value is None:
|
||||
continue
|
||||
|
||||
value = field.to_struct(value)
|
||||
resp[name] = value
|
||||
return resp
|
||||
|
||||
|
||||
def to_json_schema(cls):
|
||||
"""Generate JSON schema for given class.
|
||||
|
||||
:param cls: Class to be casted.
|
||||
:rtype: ``dict``
|
||||
|
||||
"""
|
||||
builder = build_json_schema(cls)
|
||||
return builder.build()
|
||||
|
||||
|
||||
def build_json_schema(value, parent_builder=None):
|
||||
from .models import Base
|
||||
|
||||
cls = value if inspect.isclass(value) else value.__class__
|
||||
if issubclass(cls, Base):
|
||||
return build_json_schema_object(cls, parent_builder)
|
||||
else:
|
||||
return build_json_schema_primitive(cls, parent_builder)
|
||||
|
||||
|
||||
def build_json_schema_object(cls, parent_builder=None):
|
||||
builder = builders.ObjectBuilder(cls, parent_builder)
|
||||
if builder.count_type(builder.type) > 1:
|
||||
return builder
|
||||
for _, name, field in cls.iterate_with_name():
|
||||
if isinstance(field, fields.EmbeddedField):
|
||||
builder.add_field(name, field, _parse_embedded(field, builder))
|
||||
elif isinstance(field, fields.ListField):
|
||||
builder.add_field(name, field, _parse_list(field, builder))
|
||||
else:
|
||||
builder.add_field(
|
||||
name, field, _create_primitive_field_schema(field))
|
||||
return builder
|
||||
|
||||
|
||||
def _parse_list(field, parent_builder):
|
||||
builder = builders.ListBuilder(
|
||||
parent_builder, field.nullable, default=field._default)
|
||||
for type in field.items_types:
|
||||
builder.add_type_schema(build_json_schema(type, builder))
|
||||
return builder
|
||||
|
||||
|
||||
def _parse_embedded(field, parent_builder):
|
||||
builder = builders.EmbeddedBuilder(
|
||||
parent_builder, field.nullable, default=field._default)
|
||||
for type in field.types:
|
||||
builder.add_type_schema(build_json_schema(type, builder))
|
||||
return builder
|
||||
|
||||
|
||||
def build_json_schema_primitive(cls, parent_builder):
|
||||
builder = builders.PrimitiveBuilder(cls, parent_builder)
|
||||
return builder
|
||||
|
||||
|
||||
def _create_primitive_field_schema(field):
|
||||
if isinstance(field, fields.StringField):
|
||||
obj_type = 'string'
|
||||
elif isinstance(field, fields.IntField):
|
||||
obj_type = 'number'
|
||||
elif isinstance(field, fields.FloatField):
|
||||
obj_type = 'float'
|
||||
elif isinstance(field, fields.BoolField):
|
||||
obj_type = 'boolean'
|
||||
else:
|
||||
raise errors.FieldNotSupported(
|
||||
'Field {field} is not supported!'.format(
|
||||
field=type(field).__class__.__name__))
|
||||
|
||||
if field.nullable:
|
||||
obj_type = [obj_type, 'null']
|
||||
|
||||
schema = {'type': obj_type}
|
||||
|
||||
if field.has_default:
|
||||
schema["default"] = field._default
|
||||
|
||||
return schema
|
||||
156
trains_agent/backend_api/session/jsonmodels/utilities.py
Normal file
156
trains_agent/backend_api/session/jsonmodels/utilities.py
Normal file
@@ -0,0 +1,156 @@
|
||||
from __future__ import absolute_import
|
||||
|
||||
import six
|
||||
import re
|
||||
from collections import namedtuple
|
||||
|
||||
SCALAR_TYPES = tuple(list(six.string_types) + [int, float, bool])
|
||||
|
||||
ECMA_TO_PYTHON_FLAGS = {
|
||||
'i': re.I,
|
||||
'm': re.M,
|
||||
}
|
||||
|
||||
PYTHON_TO_ECMA_FLAGS = dict(
|
||||
(value, key) for key, value in ECMA_TO_PYTHON_FLAGS.items()
|
||||
)
|
||||
|
||||
PythonRegex = namedtuple('PythonRegex', ['regex', 'flags'])
|
||||
|
||||
|
||||
def _normalize_string_type(value):
|
||||
if isinstance(value, six.string_types):
|
||||
return six.text_type(value)
|
||||
else:
|
||||
return value
|
||||
|
||||
|
||||
def _compare_dicts(one, two):
|
||||
if len(one) != len(two):
|
||||
return False
|
||||
|
||||
for key, value in one.items():
|
||||
if key not in one or key not in two:
|
||||
return False
|
||||
|
||||
if not compare_schemas(one[key], two[key]):
|
||||
return False
|
||||
return True
|
||||
|
||||
|
||||
def _compare_lists(one, two):
|
||||
if len(one) != len(two):
|
||||
return False
|
||||
|
||||
they_match = False
|
||||
for first_item in one:
|
||||
for second_item in two:
|
||||
if they_match:
|
||||
continue
|
||||
they_match = compare_schemas(first_item, second_item)
|
||||
return they_match
|
||||
|
||||
|
||||
def _assert_same_types(one, two):
|
||||
if not isinstance(one, type(two)) or not isinstance(two, type(one)):
|
||||
raise RuntimeError('Types mismatch! "{type1}" and "{type2}".'.format(
|
||||
type1=type(one).__name__, type2=type(two).__name__))
|
||||
|
||||
|
||||
def compare_schemas(one, two):
|
||||
"""Compare two structures that represents JSON schemas.
|
||||
|
||||
For comparison you can't use normal comparison, because in JSON schema
|
||||
lists DO NOT keep order (and Python lists do), so this must be taken into
|
||||
account during comparison.
|
||||
|
||||
Note this wont check all configurations, only first one that seems to
|
||||
match, which can lead to wrong results.
|
||||
|
||||
:param one: First schema to compare.
|
||||
:param two: Second schema to compare.
|
||||
:rtype: `bool`
|
||||
|
||||
"""
|
||||
one = _normalize_string_type(one)
|
||||
two = _normalize_string_type(two)
|
||||
|
||||
_assert_same_types(one, two)
|
||||
|
||||
if isinstance(one, list):
|
||||
return _compare_lists(one, two)
|
||||
elif isinstance(one, dict):
|
||||
return _compare_dicts(one, two)
|
||||
elif isinstance(one, SCALAR_TYPES):
|
||||
return one == two
|
||||
elif one is None:
|
||||
return one is two
|
||||
else:
|
||||
raise RuntimeError('Not allowed type "{type}"'.format(
|
||||
type=type(one).__name__))
|
||||
|
||||
|
||||
def is_ecma_regex(regex):
|
||||
"""Check if given regex is of type ECMA 262 or not.
|
||||
|
||||
:rtype: bool
|
||||
|
||||
"""
|
||||
parts = regex.split('/')
|
||||
|
||||
if len(parts) == 1:
|
||||
return False
|
||||
|
||||
if len(parts) < 3:
|
||||
raise ValueError('Given regex isn\'t ECMA regex nor Python regex.')
|
||||
parts.pop()
|
||||
parts.append('')
|
||||
|
||||
raw_regex = '/'.join(parts)
|
||||
if raw_regex.startswith('/') and raw_regex.endswith('/'):
|
||||
return True
|
||||
return False
|
||||
|
||||
|
||||
def convert_ecma_regex_to_python(value):
|
||||
"""Convert ECMA 262 regex to Python tuple with regex and flags.
|
||||
|
||||
If given value is already Python regex it will be returned unchanged.
|
||||
|
||||
:param string value: ECMA regex.
|
||||
:return: 2-tuple with `regex` and `flags`
|
||||
:rtype: namedtuple
|
||||
|
||||
"""
|
||||
if not is_ecma_regex(value):
|
||||
return PythonRegex(value, [])
|
||||
|
||||
parts = value.split('/')
|
||||
flags = parts.pop()
|
||||
|
||||
try:
|
||||
result_flags = [ECMA_TO_PYTHON_FLAGS[f] for f in flags]
|
||||
except KeyError:
|
||||
raise ValueError('Wrong flags "{}".'.format(flags))
|
||||
|
||||
return PythonRegex('/'.join(parts[1:]), result_flags)
|
||||
|
||||
|
||||
def convert_python_regex_to_ecma(value, flags=[]):
|
||||
"""Convert Python regex to ECMA 262 regex.
|
||||
|
||||
If given value is already ECMA regex it will be returned unchanged.
|
||||
|
||||
:param string value: Python regex.
|
||||
:param list flags: List of flags (allowed flags: `re.I`, `re.M`)
|
||||
:return: ECMA 262 regex
|
||||
:rtype: str
|
||||
|
||||
"""
|
||||
if is_ecma_regex(value):
|
||||
return value
|
||||
|
||||
result_flags = [PYTHON_TO_ECMA_FLAGS[f] for f in flags]
|
||||
result_flags = ''.join(result_flags)
|
||||
|
||||
return '/{value}/{flags}'.format(value=value, flags=result_flags)
|
||||
202
trains_agent/backend_api/session/jsonmodels/validators.py
Normal file
202
trains_agent/backend_api/session/jsonmodels/validators.py
Normal file
@@ -0,0 +1,202 @@
|
||||
"""Predefined validators."""
|
||||
import re
|
||||
|
||||
from six.moves import reduce
|
||||
|
||||
from .errors import ValidationError
|
||||
from . import utilities
|
||||
|
||||
|
||||
class Min(object):
|
||||
|
||||
"""Validator for minimum value."""
|
||||
|
||||
def __init__(self, minimum_value, exclusive=False):
|
||||
"""Init.
|
||||
|
||||
:param minimum_value: Minimum value for validator.
|
||||
:param bool exclusive: If `True`, then validated value must be strongly
|
||||
lower than given threshold.
|
||||
|
||||
"""
|
||||
self.minimum_value = minimum_value
|
||||
self.exclusive = exclusive
|
||||
|
||||
def validate(self, value):
|
||||
"""Validate value."""
|
||||
if self.exclusive:
|
||||
if value <= self.minimum_value:
|
||||
tpl = "'{value}' is lower or equal than minimum ('{min}')."
|
||||
raise ValidationError(
|
||||
tpl.format(value=value, min=self.minimum_value))
|
||||
else:
|
||||
if value < self.minimum_value:
|
||||
raise ValidationError(
|
||||
"'{value}' is lower than minimum ('{min}').".format(
|
||||
value=value, min=self.minimum_value))
|
||||
|
||||
def modify_schema(self, field_schema):
|
||||
"""Modify field schema."""
|
||||
field_schema['minimum'] = self.minimum_value
|
||||
if self.exclusive:
|
||||
field_schema['exclusiveMinimum'] = True
|
||||
|
||||
|
||||
class Max(object):
|
||||
|
||||
"""Validator for maximum value."""
|
||||
|
||||
def __init__(self, maximum_value, exclusive=False):
|
||||
"""Init.
|
||||
|
||||
:param maximum_value: Maximum value for validator.
|
||||
:param bool exclusive: If `True`, then validated value must be strongly
|
||||
bigger than given threshold.
|
||||
|
||||
"""
|
||||
self.maximum_value = maximum_value
|
||||
self.exclusive = exclusive
|
||||
|
||||
def validate(self, value):
|
||||
"""Validate value."""
|
||||
if self.exclusive:
|
||||
if value >= self.maximum_value:
|
||||
tpl = "'{val}' is bigger or equal than maximum ('{max}')."
|
||||
raise ValidationError(
|
||||
tpl.format(val=value, max=self.maximum_value))
|
||||
else:
|
||||
if value > self.maximum_value:
|
||||
raise ValidationError(
|
||||
"'{value}' is bigger than maximum ('{max}').".format(
|
||||
value=value, max=self.maximum_value))
|
||||
|
||||
def modify_schema(self, field_schema):
|
||||
"""Modify field schema."""
|
||||
field_schema['maximum'] = self.maximum_value
|
||||
if self.exclusive:
|
||||
field_schema['exclusiveMaximum'] = True
|
||||
|
||||
|
||||
class Regex(object):
|
||||
|
||||
"""Validator for regular expressions."""
|
||||
|
||||
FLAGS = {
|
||||
'ignorecase': re.I,
|
||||
'multiline': re.M,
|
||||
}
|
||||
|
||||
def __init__(self, pattern, **flags):
|
||||
"""Init.
|
||||
|
||||
Note, that if given pattern is ECMA regex, given flags will be
|
||||
**completely ignored** and taken from given regex.
|
||||
|
||||
|
||||
:param string pattern: Pattern of regex.
|
||||
:param bool flags: Flags used for the regex matching.
|
||||
Allowed flag names are in the `FLAGS` attribute. The flag value
|
||||
does not matter as long as it evaluates to True.
|
||||
Flags with False values will be ignored.
|
||||
Invalid flags will be ignored.
|
||||
|
||||
"""
|
||||
if utilities.is_ecma_regex(pattern):
|
||||
result = utilities.convert_ecma_regex_to_python(pattern)
|
||||
self.pattern, self.flags = result
|
||||
else:
|
||||
self.pattern = pattern
|
||||
self.flags = [self.FLAGS[key] for key, value in flags.items()
|
||||
if key in self.FLAGS and value]
|
||||
|
||||
def validate(self, value):
|
||||
"""Validate value."""
|
||||
flags = self._calculate_flags()
|
||||
|
||||
try:
|
||||
result = re.search(self.pattern, value, flags)
|
||||
except TypeError as te:
|
||||
raise ValidationError(*te.args)
|
||||
|
||||
if not result:
|
||||
raise ValidationError(
|
||||
'Value "{value}" did not match pattern "{pattern}".'.format(
|
||||
value=value, pattern=self.pattern
|
||||
))
|
||||
|
||||
def _calculate_flags(self):
|
||||
return reduce(lambda x, y: x | y, self.flags, 0)
|
||||
|
||||
def modify_schema(self, field_schema):
|
||||
"""Modify field schema."""
|
||||
field_schema['pattern'] = utilities.convert_python_regex_to_ecma(
|
||||
self.pattern, self.flags)
|
||||
|
||||
|
||||
class Length(object):
|
||||
|
||||
"""Validator for length."""
|
||||
|
||||
def __init__(self, minimum_value=None, maximum_value=None):
|
||||
"""Init.
|
||||
|
||||
Note that if no `minimum_value` neither `maximum_value` will be
|
||||
specified, `ValueError` will be raised.
|
||||
|
||||
:param int minimum_value: Minimum value (optional).
|
||||
:param int maximum_value: Maximum value (optional).
|
||||
|
||||
"""
|
||||
if minimum_value is None and maximum_value is None:
|
||||
raise ValueError(
|
||||
"Either 'minimum_value' or 'maximum_value' must be specified.")
|
||||
|
||||
self.minimum_value = minimum_value
|
||||
self.maximum_value = maximum_value
|
||||
|
||||
def validate(self, value):
|
||||
"""Validate value."""
|
||||
len_ = len(value)
|
||||
|
||||
if self.minimum_value is not None and len_ < self.minimum_value:
|
||||
tpl = "Value '{val}' length is lower than allowed minimum '{min}'."
|
||||
raise ValidationError(tpl.format(
|
||||
val=value, min=self.minimum_value
|
||||
))
|
||||
|
||||
if self.maximum_value is not None and len_ > self.maximum_value:
|
||||
raise ValidationError(
|
||||
"Value '{val}' length is bigger than "
|
||||
"allowed maximum '{max}'.".format(
|
||||
val=value,
|
||||
max=self.maximum_value,
|
||||
))
|
||||
|
||||
def modify_schema(self, field_schema):
|
||||
"""Modify field schema."""
|
||||
if self.minimum_value:
|
||||
field_schema['minLength'] = self.minimum_value
|
||||
|
||||
if self.maximum_value:
|
||||
field_schema['maxLength'] = self.maximum_value
|
||||
|
||||
|
||||
class Enum(object):
|
||||
|
||||
"""Validator for enums."""
|
||||
|
||||
def __init__(self, *choices):
|
||||
"""Init.
|
||||
|
||||
:param [] choices: Valid choices for the field.
|
||||
"""
|
||||
|
||||
self.choices = list(choices)
|
||||
|
||||
def validate(self, value):
|
||||
if value not in self.choices:
|
||||
tpl = "Value '{val}' is not a valid choice."
|
||||
raise ValidationError(tpl.format(val=value))
|
||||
|
||||
def modify_schema(self, field_schema):
|
||||
field_schema['enum'] = self.choices
|
||||
@@ -1,10 +1,8 @@
|
||||
import requests
|
||||
|
||||
import six
|
||||
import jsonmodels.models
|
||||
import jsonmodels.fields
|
||||
import jsonmodels.errors
|
||||
|
||||
from . import jsonmodels
|
||||
from .apimodel import ApiModel
|
||||
from .datamodel import NonStrictDataModelMixin
|
||||
|
||||
|
||||
@@ -40,6 +40,7 @@ class Session(TokenManager):
|
||||
_session_requests = 0
|
||||
_session_initial_timeout = (3.0, 10.)
|
||||
_session_timeout = (10.0, 30.)
|
||||
_session_initial_connect_retry = 4
|
||||
_write_session_data_size = 15000
|
||||
_write_session_timeout = (30.0, 30.)
|
||||
|
||||
@@ -85,6 +86,7 @@ class Session(TokenManager):
|
||||
initialize_logging=True,
|
||||
client=None,
|
||||
config=None,
|
||||
http_retries_config=None,
|
||||
**kwargs
|
||||
):
|
||||
# add backward compatibility support for old environment variables
|
||||
@@ -95,7 +97,7 @@ class Session(TokenManager):
|
||||
else:
|
||||
self.config = load()
|
||||
if initialize_logging:
|
||||
self.config.initialize_logging()
|
||||
self.config.initialize_logging(debug=kwargs.get('debug', False))
|
||||
|
||||
token_expiration_threshold_sec = self.config.get(
|
||||
"auth.token_expiration_threshold_sec", 60
|
||||
@@ -129,11 +131,10 @@ class Session(TokenManager):
|
||||
raise ValueError("host is required in init or config")
|
||||
|
||||
self.__host = host.strip("/")
|
||||
http_retries_config = self.config.get(
|
||||
http_retries_config = http_retries_config or self.config.get(
|
||||
"api.http.retries", ConfigTree()
|
||||
).as_plain_ordered_dict()
|
||||
http_retries_config["status_forcelist"] = self._retry_codes
|
||||
self.__http_session = get_http_session_with_retry(**http_retries_config)
|
||||
|
||||
self.__worker = worker or gethostname()
|
||||
|
||||
@@ -143,7 +144,14 @@ class Session(TokenManager):
|
||||
|
||||
self.client = client or "api-{}".format(__version__)
|
||||
|
||||
# limit the reconnect retries, so we get an error if we are starting the session
|
||||
http_no_retries_config = dict(**http_retries_config)
|
||||
http_no_retries_config['connect'] = self._session_initial_connect_retry
|
||||
self.__http_session = get_http_session_with_retry(**http_no_retries_config)
|
||||
# try to connect with the server
|
||||
self.refresh_token()
|
||||
# create the default session with many retries
|
||||
self.__http_session = get_http_session_with_retry(**http_retries_config)
|
||||
|
||||
# update api version from server response
|
||||
try:
|
||||
@@ -426,16 +434,15 @@ class Session(TokenManager):
|
||||
@classmethod
|
||||
def get_api_server_host(cls, config=None):
|
||||
if not config:
|
||||
from ...config import config_obj
|
||||
config = config_obj
|
||||
return None
|
||||
|
||||
return ENV_HOST.get(default=(config.get("api.api_server", None) or
|
||||
config.get("api.host", None) or cls.default_host))
|
||||
|
||||
@classmethod
|
||||
def get_app_server_host(cls, config=None):
|
||||
if not config:
|
||||
from ...config import config_obj
|
||||
config = config_obj
|
||||
return None
|
||||
|
||||
# get from config/environment
|
||||
web_host = ENV_WEB_HOST.get(default=config.get("api.web_server", None))
|
||||
@@ -462,8 +469,8 @@ class Session(TokenManager):
|
||||
@classmethod
|
||||
def get_files_server_host(cls, config=None):
|
||||
if not config:
|
||||
from ...config import config_obj
|
||||
config = config_obj
|
||||
return None
|
||||
|
||||
# get from config/environment
|
||||
files_host = ENV_FILES_HOST.get(default=(config.get("api.files_server", None)))
|
||||
if files_host:
|
||||
@@ -545,6 +552,9 @@ class Session(TokenManager):
|
||||
else:
|
||||
raise LoginError("Response data mismatch: No 'token' in 'data' value from res, receive : {}, "
|
||||
"exception: {}".format(res, ex))
|
||||
except requests.ConnectionError as ex:
|
||||
raise ValueError('Connection Error: it seems *api_server* is misconfigured. '
|
||||
'Is this the TRAINS API server {} ?'.format('/'.join(ex.request.url.split('/')[:3])))
|
||||
except Exception as ex:
|
||||
raise LoginError('Unrecognized Authentication Error: {} {}'.format(type(ex), ex))
|
||||
|
||||
|
||||
@@ -190,7 +190,7 @@ class Config(object):
|
||||
def reload(self):
|
||||
self.replace(self._reload())
|
||||
|
||||
def initialize_logging(self):
|
||||
def initialize_logging(self, debug=False):
|
||||
logging_config = self._config.get("logging", None)
|
||||
if not logging_config:
|
||||
return False
|
||||
@@ -217,6 +217,8 @@ class Config(object):
|
||||
)
|
||||
for logger in loggers:
|
||||
handlers = logger.get("handlers", None)
|
||||
if debug:
|
||||
logger['level'] = 'DEBUG'
|
||||
if not handlers:
|
||||
continue
|
||||
logger["handlers"] = [h for h in handlers if h not in deleted]
|
||||
|
||||
@@ -46,6 +46,15 @@ class Environment(object):
|
||||
local = 'local'
|
||||
|
||||
|
||||
class UptimeConf(object):
|
||||
min_api_version = "2.10"
|
||||
queue_tag_on = "force_workers:on"
|
||||
queue_tag_off = "force_workers:off"
|
||||
worker_key = "force"
|
||||
worker_value_off = ["off"]
|
||||
worker_value_on = ["on"]
|
||||
|
||||
|
||||
CONFIG_FILE_EXTENSION = '.conf'
|
||||
|
||||
|
||||
|
||||
@@ -142,6 +142,7 @@ def main():
|
||||
with open(str(conf_file), 'wt') as f:
|
||||
header = '# TRAINS-AGENT configuration file\n' \
|
||||
'api {\n' \
|
||||
' # Notice: \'host\' is the api server (default port 8008), not the web server.\n' \
|
||||
' api_server: %s\n' \
|
||||
' web_server: %s\n' \
|
||||
' files_server: %s\n' \
|
||||
@@ -233,7 +234,8 @@ def verify_credentials(api_host, credentials):
|
||||
try:
|
||||
print('Verifying credentials ...')
|
||||
if api_host:
|
||||
Session(api_key=credentials['access_key'], secret_key=credentials['secret_key'], host=api_host)
|
||||
Session(api_key=credentials['access_key'], secret_key=credentials['secret_key'], host=api_host,
|
||||
http_retries_config={"total": 2})
|
||||
print('Credentials verified!')
|
||||
return True
|
||||
else:
|
||||
@@ -275,7 +277,7 @@ def read_manual_credentials():
|
||||
|
||||
def input_url(host_type, host=None):
|
||||
while True:
|
||||
print('{} configured to: [{}] '.format(host_type, host), end='')
|
||||
print('{} configured to: {}'.format(host_type, '[{}] '.format(host) if host else ''), end='')
|
||||
parse_input = input()
|
||||
if host and (not parse_input or parse_input.lower() == 'yes' or parse_input.lower() == 'y'):
|
||||
break
|
||||
@@ -289,11 +291,12 @@ def input_url(host_type, host=None):
|
||||
def input_host_port(host_type, parsed_host):
|
||||
print('Enter port for {} host '.format(host_type), end='')
|
||||
replace_port = input().lower()
|
||||
return parsed_host.scheme + "://" + parsed_host.netloc + (':{}'.format(replace_port) if replace_port else '') + \
|
||||
parsed_host.path
|
||||
return parsed_host.scheme + "://" + parsed_host.netloc + (
|
||||
':{}'.format(replace_port) if replace_port else '') + parsed_host.path
|
||||
|
||||
|
||||
def verify_url(parse_input):
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
if not parse_input.startswith('http://') and not parse_input.startswith('https://'):
|
||||
# if we have a specific port, use http prefix, otherwise assume https
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@@ -122,6 +122,7 @@ PIP_EXTRA_INDICES = [
|
||||
DEFAULT_PIP_DOWNLOAD_CACHE = normalize_path(CONFIG_DIR, "pip-download-cache")
|
||||
ENV_AGENT_GIT_USER = EnvironmentConfig('TRAINS_AGENT_GIT_USER')
|
||||
ENV_AGENT_GIT_PASS = EnvironmentConfig('TRAINS_AGENT_GIT_PASS')
|
||||
ENV_AGENT_GIT_HOST = EnvironmentConfig('TRAINS_AGENT_GIT_HOST')
|
||||
ENV_TASK_EXECUTE_AS_USER = 'TRAINS_AGENT_EXEC_USER'
|
||||
ENV_TASK_EXTRA_PYTHON_PATH = 'TRAINS_AGENT_EXTRA_PYTHON_PATH'
|
||||
ENV_DOCKER_HOST_MOUNT = EnvironmentConfig('TRAINS_AGENT_K8S_HOST_MOUNT', 'TRAINS_AGENT_DOCKER_HOST_MOUNT')
|
||||
|
||||
0
trains_agent/external/__init__.py
vendored
Normal file
0
trains_agent/external/__init__.py
vendored
Normal file
22
trains_agent/external/requirements_parser/__init__.py
vendored
Normal file
22
trains_agent/external/requirements_parser/__init__.py
vendored
Normal file
@@ -0,0 +1,22 @@
|
||||
from .parser import parse # noqa
|
||||
|
||||
_MAJOR = 0
|
||||
_MINOR = 2
|
||||
_PATCH = 0
|
||||
|
||||
|
||||
def version_tuple():
|
||||
'''
|
||||
Returns a 3-tuple of ints that represent the version
|
||||
'''
|
||||
return (_MAJOR, _MINOR, _PATCH)
|
||||
|
||||
|
||||
def version():
|
||||
'''
|
||||
Returns a string representation of the version
|
||||
'''
|
||||
return '%d.%d.%d' % (version_tuple())
|
||||
|
||||
|
||||
__version__ = version()
|
||||
44
trains_agent/external/requirements_parser/fragment.py
vendored
Normal file
44
trains_agent/external/requirements_parser/fragment.py
vendored
Normal file
@@ -0,0 +1,44 @@
|
||||
import re
|
||||
|
||||
# Copied from pip
|
||||
# https://github.com/pypa/pip/blob/281eb61b09d87765d7c2b92f6982b3fe76ccb0af/pip/index.py#L947
|
||||
HASH_ALGORITHMS = set(['sha1', 'sha224', 'sha384', 'sha256', 'sha512', 'md5'])
|
||||
|
||||
extras_require_search = re.compile(
|
||||
r'(?P<name>.+)\[(?P<extras>[^\]]+)\]').search
|
||||
|
||||
|
||||
def parse_fragment(fragment_string):
|
||||
"""Takes a fragment string nd returns a dict of the components"""
|
||||
fragment_string = fragment_string.lstrip('#')
|
||||
|
||||
try:
|
||||
return dict(
|
||||
key_value_string.split('=')
|
||||
for key_value_string in fragment_string.split('&')
|
||||
)
|
||||
except ValueError:
|
||||
raise ValueError(
|
||||
'Invalid fragment string {fragment_string}'.format(
|
||||
fragment_string=fragment_string
|
||||
)
|
||||
)
|
||||
|
||||
|
||||
def get_hash_info(d):
|
||||
"""Returns the first matching hashlib name and value from a dict"""
|
||||
for key in d.keys():
|
||||
if key.lower() in HASH_ALGORITHMS:
|
||||
return key, d[key]
|
||||
|
||||
return None, None
|
||||
|
||||
|
||||
def parse_extras_require(egg):
|
||||
if egg is not None:
|
||||
match = extras_require_search(egg)
|
||||
if match is not None:
|
||||
name = match.group('name')
|
||||
extras = match.group('extras')
|
||||
return name, [extra.strip() for extra in extras.split(',')]
|
||||
return egg, []
|
||||
50
trains_agent/external/requirements_parser/parser.py
vendored
Normal file
50
trains_agent/external/requirements_parser/parser.py
vendored
Normal file
@@ -0,0 +1,50 @@
|
||||
import os
|
||||
import warnings
|
||||
|
||||
from .requirement import Requirement
|
||||
|
||||
|
||||
def parse(reqstr):
|
||||
"""
|
||||
Parse a requirements file into a list of Requirements
|
||||
|
||||
See: pip/req.py:parse_requirements()
|
||||
|
||||
:param reqstr: a string or file like object containing requirements
|
||||
:returns: a *generator* of Requirement objects
|
||||
"""
|
||||
filename = getattr(reqstr, 'name', None)
|
||||
try:
|
||||
# Python 2.x compatibility
|
||||
if not isinstance(reqstr, basestring):
|
||||
reqstr = reqstr.read()
|
||||
except NameError:
|
||||
# Python 3.x only
|
||||
if not isinstance(reqstr, str):
|
||||
reqstr = reqstr.read()
|
||||
|
||||
for line in reqstr.splitlines():
|
||||
line = line.strip()
|
||||
if line == '':
|
||||
continue
|
||||
elif not line or line.startswith('#'):
|
||||
# comments are lines that start with # only
|
||||
continue
|
||||
elif line.startswith('-r') or line.startswith('--requirement'):
|
||||
_, new_filename = line.split()
|
||||
new_file_path = os.path.join(os.path.dirname(filename or '.'),
|
||||
new_filename)
|
||||
with open(new_file_path) as f:
|
||||
for requirement in parse(f):
|
||||
yield requirement
|
||||
elif line.startswith('-f') or line.startswith('--find-links') or \
|
||||
line.startswith('-i') or line.startswith('--index-url') or \
|
||||
line.startswith('--extra-index-url') or \
|
||||
line.startswith('--no-index'):
|
||||
warnings.warn('Private repos not supported. Skipping.')
|
||||
continue
|
||||
elif line.startswith('-Z') or line.startswith('--always-unzip'):
|
||||
warnings.warn('Unused option --always-unzip. Skipping.')
|
||||
continue
|
||||
else:
|
||||
yield Requirement.parse(line)
|
||||
241
trains_agent/external/requirements_parser/requirement.py
vendored
Normal file
241
trains_agent/external/requirements_parser/requirement.py
vendored
Normal file
@@ -0,0 +1,241 @@
|
||||
from __future__ import unicode_literals
|
||||
import re
|
||||
from pkg_resources import Requirement as Req
|
||||
|
||||
from .fragment import get_hash_info, parse_fragment, parse_extras_require
|
||||
from .vcs import VCS, VCS_SCHEMES
|
||||
|
||||
|
||||
URI_REGEX = re.compile(
|
||||
r'^(?P<scheme>https?|file|ftps?)://(?P<path>[^#]+)'
|
||||
r'(#(?P<fragment>\S+))?'
|
||||
)
|
||||
|
||||
VCS_REGEX = re.compile(
|
||||
r'^(?P<scheme>{0})://'.format(r'|'.join(
|
||||
[scheme.replace('+', r'\+') for scheme in VCS_SCHEMES])) +
|
||||
r'((?P<login>[^/@]+)@)?'
|
||||
r'(?P<path>[^#@]+)'
|
||||
r'(@(?P<revision>[^#]+))?'
|
||||
r'(#(?P<fragment>\S+))?'
|
||||
)
|
||||
|
||||
# This matches just about everyting
|
||||
LOCAL_REGEX = re.compile(
|
||||
r'^((?P<scheme>file)://)?'
|
||||
r'(?P<path>[^#]+)' +
|
||||
r'(#(?P<fragment>\S+))?'
|
||||
)
|
||||
|
||||
|
||||
class Requirement(object):
|
||||
"""
|
||||
Represents a single requirementfrom trains_agent.external.requirements_parser.requirement import Requirement
|
||||
|
||||
Typically instances of this class are created with ``Requirement.parse``.
|
||||
For local file requirements, there's no verification that the file
|
||||
exists. This class attempts to be *dict-like*.
|
||||
|
||||
See: http://www.pip-installer.org/en/latest/logic.html
|
||||
|
||||
**Members**:
|
||||
|
||||
* ``line`` - the actual requirement line being parsed
|
||||
* ``editable`` - a boolean whether this requirement is "editable"
|
||||
* ``local_file`` - a boolean whether this requirement is a local file/path
|
||||
* ``specifier`` - a boolean whether this requirement used a requirement
|
||||
specifier (eg. "django>=1.5" or "requirements")
|
||||
* ``vcs`` - a string specifying the version control system
|
||||
* ``revision`` - a version control system specifier
|
||||
* ``name`` - the name of the requirement
|
||||
* ``uri`` - the URI if this requirement was specified by URI
|
||||
* ``subdirectory`` - the subdirectory fragment of the URI
|
||||
* ``path`` - the local path to the requirement
|
||||
* ``hash_name`` - the type of hashing algorithm indicated in the line
|
||||
* ``hash`` - the hash value indicated by the requirement line
|
||||
* ``extras`` - a list of extras for this requirement
|
||||
(eg. "mymodule[extra1, extra2]")
|
||||
* ``specs`` - a list of specs for this requirement
|
||||
(eg. "mymodule>1.5,<1.6" => [('>', '1.5'), ('<', '1.6')])
|
||||
"""
|
||||
|
||||
def __init__(self, line):
|
||||
# Do not call this private method
|
||||
self.line = line
|
||||
self.editable = False
|
||||
self.local_file = False
|
||||
self.specifier = False
|
||||
self.vcs = None
|
||||
self.name = None
|
||||
self.subdirectory = None
|
||||
self.uri = None
|
||||
self.path = None
|
||||
self.revision = None
|
||||
self.hash_name = None
|
||||
self.hash = None
|
||||
self.extras = []
|
||||
self.specs = []
|
||||
|
||||
def __repr__(self):
|
||||
return '<Requirement: "{0}">'.format(self.line)
|
||||
|
||||
def __getitem__(self, key):
|
||||
return getattr(self, key)
|
||||
|
||||
def keys(self):
|
||||
return self.__dict__.keys()
|
||||
|
||||
@classmethod
|
||||
def parse_editable(cls, line):
|
||||
"""
|
||||
Parses a Requirement from an "editable" requirement which is either
|
||||
a local project path or a VCS project URI.
|
||||
|
||||
See: pip/req.py:from_editable()
|
||||
|
||||
:param line: an "editable" requirement
|
||||
:returns: a Requirement instance for the given line
|
||||
:raises: ValueError on an invalid requirement
|
||||
"""
|
||||
|
||||
req = cls('-e {0}'.format(line))
|
||||
req.editable = True
|
||||
vcs_match = VCS_REGEX.match(line)
|
||||
local_match = LOCAL_REGEX.match(line)
|
||||
|
||||
if vcs_match is not None:
|
||||
groups = vcs_match.groupdict()
|
||||
if groups.get('login'):
|
||||
req.uri = '{scheme}://{login}@{path}'.format(**groups)
|
||||
else:
|
||||
req.uri = '{scheme}://{path}'.format(**groups)
|
||||
req.revision = groups['revision']
|
||||
if groups['fragment']:
|
||||
fragment = parse_fragment(groups['fragment'])
|
||||
egg = fragment.get('egg')
|
||||
req.name, req.extras = parse_extras_require(egg)
|
||||
req.hash_name, req.hash = get_hash_info(fragment)
|
||||
req.subdirectory = fragment.get('subdirectory')
|
||||
for vcs in VCS:
|
||||
if req.uri.startswith(vcs):
|
||||
req.vcs = vcs
|
||||
else:
|
||||
assert local_match is not None, 'This should match everything'
|
||||
groups = local_match.groupdict()
|
||||
req.local_file = True
|
||||
if groups['fragment']:
|
||||
fragment = parse_fragment(groups['fragment'])
|
||||
egg = fragment.get('egg')
|
||||
req.name, req.extras = parse_extras_require(egg)
|
||||
req.hash_name, req.hash = get_hash_info(fragment)
|
||||
req.subdirectory = fragment.get('subdirectory')
|
||||
req.path = groups['path']
|
||||
|
||||
return req
|
||||
|
||||
@classmethod
|
||||
def parse_line(cls, line):
|
||||
"""
|
||||
Parses a Requirement from a non-editable requirement.
|
||||
|
||||
See: pip/req.py:from_line()
|
||||
|
||||
:param line: a "non-editable" requirement
|
||||
:returns: a Requirement instance for the given line
|
||||
:raises: ValueError on an invalid requirement
|
||||
"""
|
||||
|
||||
req = cls(line)
|
||||
|
||||
vcs_match = VCS_REGEX.match(line)
|
||||
uri_match = URI_REGEX.match(line)
|
||||
local_match = LOCAL_REGEX.match(line)
|
||||
|
||||
if vcs_match is not None:
|
||||
groups = vcs_match.groupdict()
|
||||
if groups.get('login'):
|
||||
req.uri = '{scheme}://{login}@{path}'.format(**groups)
|
||||
else:
|
||||
req.uri = '{scheme}://{path}'.format(**groups)
|
||||
req.revision = groups['revision']
|
||||
if groups['fragment']:
|
||||
fragment = parse_fragment(groups['fragment'])
|
||||
egg = fragment.get('egg')
|
||||
req.name, req.extras = parse_extras_require(egg)
|
||||
req.hash_name, req.hash = get_hash_info(fragment)
|
||||
req.subdirectory = fragment.get('subdirectory')
|
||||
for vcs in VCS:
|
||||
if req.uri.startswith(vcs):
|
||||
req.vcs = vcs
|
||||
elif uri_match is not None:
|
||||
groups = uri_match.groupdict()
|
||||
req.uri = '{scheme}://{path}'.format(**groups)
|
||||
if groups['fragment']:
|
||||
fragment = parse_fragment(groups['fragment'])
|
||||
egg = fragment.get('egg')
|
||||
req.name, req.extras = parse_extras_require(egg)
|
||||
req.hash_name, req.hash = get_hash_info(fragment)
|
||||
req.subdirectory = fragment.get('subdirectory')
|
||||
if groups['scheme'] == 'file':
|
||||
req.local_file = True
|
||||
elif '#egg=' in line:
|
||||
# Assume a local file match
|
||||
assert local_match is not None, 'This should match everything'
|
||||
groups = local_match.groupdict()
|
||||
req.local_file = True
|
||||
if groups['fragment']:
|
||||
fragment = parse_fragment(groups['fragment'])
|
||||
egg = fragment.get('egg')
|
||||
name, extras = parse_extras_require(egg)
|
||||
req.name = fragment.get('egg')
|
||||
req.hash_name, req.hash = get_hash_info(fragment)
|
||||
req.subdirectory = fragment.get('subdirectory')
|
||||
req.path = groups['path']
|
||||
else:
|
||||
# This is a requirement specifier.
|
||||
# Delegate to pkg_resources and hope for the best
|
||||
req.specifier = True
|
||||
pkg_req = Req.parse(line)
|
||||
req.name = pkg_req.unsafe_name
|
||||
req.extras = list(pkg_req.extras)
|
||||
req.specs = pkg_req.specs
|
||||
return req
|
||||
|
||||
@classmethod
|
||||
def parse(cls, line):
|
||||
"""
|
||||
Parses a Requirement from a line of a requirement file.
|
||||
|
||||
:param line: a line of a requirement file
|
||||
:returns: a Requirement instance for the given line
|
||||
:raises: ValueError on an invalid requirement
|
||||
"""
|
||||
line = line.lstrip()
|
||||
if line.startswith('-e') or line.startswith('--editable'):
|
||||
# Editable installs are either a local project path
|
||||
# or a VCS project URI
|
||||
return cls.parse_editable(
|
||||
re.sub(r'^(-e|--editable=?)\s*', '', line))
|
||||
elif '@' in line and ('#' not in line or line.index('#') > line.index('@')):
|
||||
# Allegro bug fix: support 'name @ git+' entries
|
||||
name, uri = line.split('@', 1)
|
||||
name = name.strip()
|
||||
uri = uri.strip()
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
# check if the name is valid & parsed
|
||||
Req.parse(name)
|
||||
# if we are here, name is a valid package name, check if the vcs part is valid
|
||||
if VCS_REGEX.match(uri):
|
||||
req = cls.parse_line(uri)
|
||||
req.name = name
|
||||
return req
|
||||
elif URI_REGEX.match(uri):
|
||||
req = cls.parse_line(uri)
|
||||
req.name = name
|
||||
req.line = line
|
||||
return req
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
return cls.parse_line(line)
|
||||
30
trains_agent/external/requirements_parser/vcs.py
vendored
Normal file
30
trains_agent/external/requirements_parser/vcs.py
vendored
Normal file
@@ -0,0 +1,30 @@
|
||||
from __future__ import unicode_literals
|
||||
|
||||
VCS = [
|
||||
'git',
|
||||
'hg',
|
||||
'svn',
|
||||
'bzr',
|
||||
]
|
||||
|
||||
VCS_SCHEMES = [
|
||||
'git',
|
||||
'git+https',
|
||||
'git+ssh',
|
||||
'git+git',
|
||||
'hg+http',
|
||||
'hg+https',
|
||||
'hg+static-http',
|
||||
'hg+ssh',
|
||||
'svn',
|
||||
'svn+svn',
|
||||
'svn+http',
|
||||
'svn+https',
|
||||
'svn+ssh',
|
||||
'bzr+http',
|
||||
'bzr+https',
|
||||
'bzr+ssh',
|
||||
'bzr+sftp',
|
||||
'bzr+ftp',
|
||||
'bzr+lp',
|
||||
]
|
||||
@@ -1,45 +1,115 @@
|
||||
from __future__ import print_function, division, unicode_literals
|
||||
|
||||
import base64
|
||||
import logging
|
||||
import os
|
||||
import re
|
||||
import subprocess
|
||||
import tempfile
|
||||
from copy import deepcopy
|
||||
|
||||
import yaml
|
||||
import json
|
||||
from time import sleep
|
||||
from typing import Text, List
|
||||
|
||||
from pyhocon import HOCONConverter
|
||||
|
||||
from trains_agent.commands.events import Events
|
||||
from trains_agent.commands.worker import Worker
|
||||
from trains_agent.errors import APIError
|
||||
from trains_agent.helper.base import safe_remove_file
|
||||
from trains_agent.helper.dicts import merge_dicts
|
||||
from trains_agent.helper.process import get_bash_output
|
||||
from trains_agent.helper.resource_monitor import ResourceMonitor
|
||||
from trains_agent.interface.base import ObjectID
|
||||
|
||||
|
||||
class K8sIntegration(Worker):
|
||||
K8S_PENDING_QUEUE = "k8s_scheduler"
|
||||
|
||||
KUBECTL_RUN_CMD = "kubectl run trains_id_{task_id} " \
|
||||
KUBECTL_APPLY_CMD = "kubectl apply -f"
|
||||
|
||||
KUBECTL_RUN_CMD = "kubectl run trains-{queue_name}-id-{task_id} " \
|
||||
"--image {docker_image} " \
|
||||
"--restart=Never --replicas=1 " \
|
||||
"--generator=run-pod/v1"
|
||||
"--generator=run-pod/v1 " \
|
||||
"--namespace=trains"
|
||||
|
||||
KUBECTL_DELETE_CMD = "kubectl delete pods " \
|
||||
"--selector=TRAINS=agent " \
|
||||
"--field-selector=status.phase!=Pending,status.phase!=Running"
|
||||
"--field-selector=status.phase!=Pending,status.phase!=Running " \
|
||||
"--namespace=trains"
|
||||
|
||||
CONTAINER_BASH_SCRIPT = "apt-get install -y git python-pip && " \
|
||||
"pip install trains-agent && " \
|
||||
"python -u -m trains_agent execute --full-monitoring --require-queue --id {}"
|
||||
BASH_INSTALL_SSH_CMD = [
|
||||
"apt-get install -y openssh-server",
|
||||
"mkdir -p /var/run/sshd",
|
||||
"echo 'root:training' | chpasswd",
|
||||
"echo 'PermitRootLogin yes' >> /etc/ssh/sshd_config",
|
||||
"sed -i 's/PermitRootLogin prohibit-password/PermitRootLogin yes/' /etc/ssh/sshd_config",
|
||||
r"sed 's@session\s*required\s*pam_loginuid.so@session optional pam_loginuid.so@g' -i /etc/pam.d/sshd",
|
||||
"echo 'AcceptEnv TRAINS_API_ACCESS_KEY TRAINS_API_SECRET_KEY' >> /etc/ssh/sshd_config",
|
||||
'echo "export VISIBLE=now" >> /etc/profile',
|
||||
'echo "export PATH=$PATH" >> /etc/profile',
|
||||
'echo "ldconfig" >> /etc/profile',
|
||||
"/usr/sbin/sshd -p {port}"]
|
||||
|
||||
def __init__(self, k8s_pending_queue_name=None, kubectl_cmd=None, container_bash_script=None, debug=False):
|
||||
CONTAINER_BASH_SCRIPT = [
|
||||
"export DEBIAN_FRONTEND='noninteractive'",
|
||||
"echo 'Binary::apt::APT::Keep-Downloaded-Packages \"true\";' > /etc/apt/apt.conf.d/docker-clean",
|
||||
"chown -R root /root/.cache/pip",
|
||||
"apt-get update",
|
||||
"apt-get install -y git libsm6 libxext6 libxrender-dev libglib2.0-0",
|
||||
"declare LOCAL_PYTHON",
|
||||
"for i in {{10..5}}; do which python3.$i && python3.$i -m pip --version && "
|
||||
"export LOCAL_PYTHON=$(which python3.$i) && break ; done",
|
||||
"[ ! -z $LOCAL_PYTHON ] || apt-get install -y python3-pip",
|
||||
"[ ! -z $LOCAL_PYTHON ] || export LOCAL_PYTHON=python3",
|
||||
"$LOCAL_PYTHON -m pip install trains-agent",
|
||||
"{extra_bash_init_cmd}",
|
||||
"$LOCAL_PYTHON -m trains_agent execute --full-monitoring --require-queue --id {task_id}"
|
||||
]
|
||||
|
||||
AGENT_LABEL = "TRAINS=agent"
|
||||
LIMIT_POD_LABEL = "ai.allegro.agent.serial=pod-{pod_number}"
|
||||
|
||||
_edit_hyperparams_version = "2.9"
|
||||
|
||||
def __init__(
|
||||
self,
|
||||
k8s_pending_queue_name=None,
|
||||
kubectl_cmd=None,
|
||||
container_bash_script=None,
|
||||
debug=False,
|
||||
ports_mode=False,
|
||||
num_of_services=20,
|
||||
user_props_cb=None,
|
||||
overrides_yaml=None,
|
||||
template_yaml=None,
|
||||
trains_conf_file=None,
|
||||
extra_bash_init_script=None,
|
||||
):
|
||||
"""
|
||||
Initialize the k8s integration glue layer daemon
|
||||
|
||||
:param str k8s_pending_queue_name: queue name to use when task is pending in the k8s scheduler
|
||||
:param str|callable kubectl_cmd: kubectl command line str, supports formating (default: KUBECTL_RUN_CMD)
|
||||
:param str|callable kubectl_cmd: kubectl command line str, supports formatting (default: KUBECTL_RUN_CMD)
|
||||
example: "task={task_id} image={docker_image} queue_id={queue_id}"
|
||||
or a callable function: kubectl_cmd(task_id, docker_image, queue_id, task_data)
|
||||
:param str container_bash_script: container bash script to be executed in k8s (default: CONTAINER_BASH_SCRIPT)
|
||||
Notice this string will use format() call, if you have curly brackets they should be doubled { -> {{
|
||||
Format arguments passed: {task_id} and {extra_bash_init_cmd}
|
||||
:param bool debug: Switch logging on
|
||||
:param bool ports_mode: Adds a label to each pod which can be used in services in order to expose ports.
|
||||
Requires the `num_of_services` parameter.
|
||||
:param int num_of_services: Number of k8s services configured in the cluster. Required if `port_mode` is True.
|
||||
(default: 20)
|
||||
:param callable user_props_cb: An Optional callable allowing additional user properties to be specified
|
||||
when scheduling a task to run in a pod. Callable can receive an optional pod number and should return
|
||||
a dictionary of user properties (name and value). Signature is [[Optional[int]], Dict[str,str]]
|
||||
:param str overrides_yaml: YAML file containing the overrides for the pod (optional)
|
||||
:param str template_yaml: YAML file containing the template for the pod (optional).
|
||||
If provided the pod is scheduled with kubectl apply and overrides are ignored, otherwise with kubectl run.
|
||||
:param str trains_conf_file: trains.conf file to be use by the pod itself (optional)
|
||||
:param str extra_bash_init_script: Additional bash script to run before starting the Task inside the container
|
||||
"""
|
||||
super(K8sIntegration, self).__init__()
|
||||
self.k8s_pending_queue_name = k8s_pending_queue_name or self.K8S_PENDING_QUEUE
|
||||
@@ -51,12 +121,88 @@ class K8sIntegration(Worker):
|
||||
if debug:
|
||||
self.log.logger.disabled = False
|
||||
self.log.logger.setLevel(logging.INFO)
|
||||
self.ports_mode = ports_mode
|
||||
self.num_of_services = num_of_services
|
||||
self._edit_hyperparams_support = None
|
||||
self._user_props_cb = user_props_cb
|
||||
self.trains_conf_file = None
|
||||
self.overrides_json_string = None
|
||||
self.template_dict = None
|
||||
self.extra_bash_init_script = extra_bash_init_script or None
|
||||
if self.extra_bash_init_script and not isinstance(self.extra_bash_init_script, str):
|
||||
self.extra_bash_init_script = ' ; '.join(self.extra_bash_init_script) # noqa
|
||||
self.pod_limits = []
|
||||
self.pod_requests = []
|
||||
if overrides_yaml:
|
||||
with open(os.path.expandvars(os.path.expanduser(str(overrides_yaml))), 'rt') as f:
|
||||
overrides = yaml.load(f, Loader=getattr(yaml, 'FullLoader', None))
|
||||
if overrides:
|
||||
containers = overrides.get('spec', {}).get('containers', [])
|
||||
for c in containers:
|
||||
resources = {str(k).lower(): v for k, v in c.get('resources', {}).items()}
|
||||
if not resources:
|
||||
continue
|
||||
if resources.get('limits'):
|
||||
self.pod_limits += ['{}={}'.format(k, v) for k, v in resources['limits'].items()]
|
||||
if resources.get('requests'):
|
||||
self.pod_requests += ['{}={}'.format(k, v) for k, v in resources['requests'].items()]
|
||||
# remove double entries
|
||||
self.pod_limits = list(set(self.pod_limits))
|
||||
self.pod_requests = list(set(self.pod_requests))
|
||||
if self.pod_limits or self.pod_requests:
|
||||
self.log.warning('Found pod container requests={} limits={}'.format(
|
||||
self.pod_limits, self.pod_requests))
|
||||
if containers:
|
||||
self.log.warning('Removing containers section: {}'.format(overrides['spec'].pop('containers')))
|
||||
self.overrides_json_string = json.dumps(overrides)
|
||||
if template_yaml:
|
||||
with open(os.path.expandvars(os.path.expanduser(str(template_yaml))), 'rt') as f:
|
||||
self.template_dict = yaml.load(f, Loader=getattr(yaml, 'FullLoader', None))
|
||||
|
||||
def run_one_task(self, queue: Text, task_id: Text, worker_args=None):
|
||||
if trains_conf_file:
|
||||
with open(os.path.expandvars(os.path.expanduser(str(trains_conf_file))), 'rt') as f:
|
||||
self.trains_conf_file = f.read()
|
||||
# make sure we use system packages!
|
||||
self.trains_conf_file += '\nagent.package_manager.system_site_packages=true\n'
|
||||
|
||||
def _set_task_user_properties(self, task_id: str, **properties: str):
|
||||
if self._edit_hyperparams_support is not True:
|
||||
# either not supported or never tested
|
||||
if self._edit_hyperparams_support == self._session.api_version:
|
||||
# tested against latest api_version, not supported
|
||||
return
|
||||
if not self._session.check_min_api_version(self._edit_hyperparams_version):
|
||||
# not supported due to insufficient api_version
|
||||
self._edit_hyperparams_support = self._session.api_version
|
||||
return
|
||||
try:
|
||||
self._session.get(
|
||||
service="tasks",
|
||||
action="edit_hyper_params",
|
||||
task=task_id,
|
||||
hyperparams=[
|
||||
{
|
||||
"section": "properties",
|
||||
"name": k,
|
||||
"value": str(v),
|
||||
}
|
||||
for k, v in properties.items()
|
||||
],
|
||||
)
|
||||
# definitely supported
|
||||
self._runtime_props_support = True
|
||||
except APIError as error:
|
||||
if error.code == 404:
|
||||
self._edit_hyperparams_support = self._session.api_version
|
||||
|
||||
def run_one_task(self, queue: Text, task_id: Text, worker_args=None, **_):
|
||||
print('Pulling task {} launching on kubernetes cluster'.format(task_id))
|
||||
task_data = self._session.api_client.tasks.get_all(id=[task_id])[0]
|
||||
|
||||
# push task into the k8s queue, so we have visibility on pending tasks in the k8s scheduler
|
||||
try:
|
||||
print('Pushing task {} into temporary pending queue'.format(task_id))
|
||||
self._session.api_client.tasks.reset(task_id)
|
||||
self._session.api_client.tasks.enqueue(task_id, queue=self.k8s_pending_queue_name,
|
||||
status_reason='k8s pending scheduler')
|
||||
except Exception as e:
|
||||
@@ -65,36 +211,231 @@ class K8sIntegration(Worker):
|
||||
return
|
||||
|
||||
if task_data.execution.docker_cmd:
|
||||
docker_image = task_data.execution.docker_cmd
|
||||
docker_parts = task_data.execution.docker_cmd
|
||||
else:
|
||||
docker_image = str(os.environ.get("TRAINS_DOCKER_IMAGE") or
|
||||
docker_parts = str(os.environ.get("TRAINS_DOCKER_IMAGE") or
|
||||
self._session.config.get("agent.default_docker.image", "nvidia/cuda"))
|
||||
|
||||
# take the first part, this is the docker image name (not arguments)
|
||||
docker_image = docker_image.split()[0]
|
||||
docker_parts = docker_parts.split()
|
||||
docker_image = docker_parts[0]
|
||||
docker_args = docker_parts[1:] if len(docker_parts) > 1 else []
|
||||
|
||||
create_trains_conf = "echo '{}' >> ~/trains.conf && ".format(
|
||||
HOCONConverter.to_hocon(self._session.config._config))
|
||||
# get the trains.conf encoded file
|
||||
# noinspection PyProtectedMember
|
||||
hocon_config_encoded = (self.trains_conf_file or self._session._config_file).encode('ascii')
|
||||
create_trains_conf = "echo '{}' | base64 --decode >> ~/trains.conf".format(
|
||||
base64.b64encode(
|
||||
hocon_config_encoded
|
||||
).decode('ascii')
|
||||
)
|
||||
|
||||
if callable(self.kubectl_cmd):
|
||||
kubectl_cmd = self.kubectl_cmd(task_id, docker_image, queue, task_data)
|
||||
if self.ports_mode:
|
||||
print("Kubernetes looking for available pod to use")
|
||||
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
queue_name = self._session.api_client.queues.get_by_id(queue=queue).name
|
||||
except Exception:
|
||||
queue_name = 'k8s'
|
||||
|
||||
# conform queue name to k8s standards
|
||||
safe_queue_name = queue_name.lower().strip()
|
||||
safe_queue_name = re.sub(r'\W+', '', safe_queue_name).replace('_', '').replace('-', '')
|
||||
|
||||
# Search for a free pod number
|
||||
pod_number = 1
|
||||
while self.ports_mode:
|
||||
kubectl_cmd_new = "kubectl get pods -l {pod_label},{agent_label} -n trains".format(
|
||||
pod_label=self.LIMIT_POD_LABEL.format(pod_number=pod_number),
|
||||
agent_label=self.AGENT_LABEL
|
||||
)
|
||||
process = subprocess.Popen(kubectl_cmd_new.split(), stdout=subprocess.PIPE, stderr=subprocess.PIPE)
|
||||
output, error = process.communicate()
|
||||
output = '' if not output else output if isinstance(output, str) else output.decode('utf-8')
|
||||
error = '' if not error else error if isinstance(error, str) else error.decode('utf-8')
|
||||
|
||||
if not output:
|
||||
# No such pod exist so we can use the pod_number we found
|
||||
break
|
||||
if pod_number >= self.num_of_services:
|
||||
# All pod numbers are taken, exit
|
||||
self.log.warning(
|
||||
"kubectl last result: {}\n{}\nAll k8s services are in use, task '{}' "
|
||||
"will be enqueued back to queue '{}'".format(
|
||||
error, output, task_id, queue
|
||||
)
|
||||
)
|
||||
self._session.api_client.tasks.reset(task_id)
|
||||
self._session.api_client.tasks.enqueue(
|
||||
task_id, queue=queue, status_reason='k8s max pod limit (no free k8s service)')
|
||||
return
|
||||
pod_number += 1
|
||||
|
||||
labels = ([self.LIMIT_POD_LABEL.format(pod_number=pod_number)] if self.ports_mode else []) + [self.AGENT_LABEL]
|
||||
|
||||
if self.ports_mode:
|
||||
print("Kubernetes scheduling task id={} on pod={}".format(task_id, pod_number))
|
||||
else:
|
||||
kubectl_cmd = self.kubectl_cmd.format(task_id=task_id, docker_image=docker_image, queue_id=queue)
|
||||
print("Kubernetes scheduling task id={}".format(task_id))
|
||||
|
||||
# make sure we gave a list
|
||||
if self.template_dict:
|
||||
output, error = self._kubectl_apply(
|
||||
create_trains_conf=create_trains_conf,
|
||||
labels=labels, docker_image=docker_image, docker_args=docker_args,
|
||||
task_id=task_id, queue=queue, queue_name=safe_queue_name)
|
||||
else:
|
||||
output, error = self._kubectl_run(
|
||||
create_trains_conf=create_trains_conf,
|
||||
labels=labels, docker_image=docker_image,
|
||||
task_data=task_data,
|
||||
task_id=task_id, queue=queue, queue_name=safe_queue_name)
|
||||
|
||||
error = '' if not error else (error if isinstance(error, str) else error.decode('utf-8'))
|
||||
output = '' if not output else (output if isinstance(output, str) else output.decode('utf-8'))
|
||||
print('kubectl output:\n{}\n{}'.format(error, output))
|
||||
if error:
|
||||
self.log.error("Running kubectl encountered an error: {}".format(error))
|
||||
|
||||
user_props = {"k8s-queue": str(queue_name)}
|
||||
if self.ports_mode:
|
||||
user_props.update({"k8s-pod-number": pod_number, "k8s-pod-label": labels[0]})
|
||||
|
||||
if self._user_props_cb:
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
custom_props = self._user_props_cb(pod_number) if self.ports_mode else self._user_props_cb()
|
||||
user_props.update(custom_props)
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
if user_props:
|
||||
self._set_task_user_properties(
|
||||
task_id=task_id,
|
||||
**user_props
|
||||
)
|
||||
|
||||
def _parse_docker_args(self, docker_args):
|
||||
# type: (list) -> dict
|
||||
kube_args = {'env': []}
|
||||
while docker_args:
|
||||
cmd = docker_args.pop().strip()
|
||||
if cmd in ('-e', '--env',):
|
||||
env = docker_args.pop().strip()
|
||||
key, value = env.split('=', 1)
|
||||
kube_args[key] += {key: value}
|
||||
else:
|
||||
self.log.warning('skipping docker argument {} (only -e --env supported)'.format(cmd))
|
||||
return kube_args
|
||||
|
||||
def _kubectl_apply(self, create_trains_conf, docker_image, docker_args, labels, queue, task_id, queue_name):
|
||||
template = deepcopy(self.template_dict)
|
||||
template.setdefault('apiVersion', 'v1')
|
||||
template['kind'] = 'Pod'
|
||||
template.setdefault('metadata', {})
|
||||
name = 'trains-{queue}-id-{task_id}'.format(queue=queue_name, task_id=task_id)
|
||||
template['metadata']['name'] = name
|
||||
template.setdefault('spec', {})
|
||||
template['spec'].setdefault('containers', [])
|
||||
if labels:
|
||||
labels_dict = dict(pair.split('=', 1) for pair in labels)
|
||||
template['metadata'].setdefault('labels', {})
|
||||
template['metadata']['labels'].update(labels_dict)
|
||||
container = self._parse_docker_args(docker_args)
|
||||
|
||||
container_bash_script = [self.container_bash_script] if isinstance(self.container_bash_script, str) \
|
||||
else self.container_bash_script
|
||||
|
||||
script_encoded = '\n'.join(
|
||||
['#!/bin/bash', ] +
|
||||
[line.format(extra_bash_init_cmd=self.extra_bash_init_script or '', task_id=task_id)
|
||||
for line in container_bash_script])
|
||||
|
||||
create_init_script = \
|
||||
"echo '{}' | base64 --decode >> ~/__start_agent__.sh ; " \
|
||||
"/bin/bash ~/__start_agent__.sh".format(
|
||||
base64.b64encode(
|
||||
script_encoded.encode('ascii')
|
||||
).decode('ascii'))
|
||||
|
||||
container = merge_dicts(
|
||||
container,
|
||||
dict(name=name, image=docker_image,
|
||||
command=['/bin/bash'],
|
||||
args=['-c', '{} ; {}'.format(create_trains_conf, create_init_script)])
|
||||
)
|
||||
|
||||
if template['spec']['containers']:
|
||||
template['spec']['containers'][0] = merge_dicts(template['spec']['containers'][0], container)
|
||||
else:
|
||||
template['spec']['containers'].append(container)
|
||||
|
||||
fp, yaml_file = tempfile.mkstemp(prefix='trains_k8stmpl_', suffix='.yml')
|
||||
os.close(fp)
|
||||
with open(yaml_file, 'wt') as f:
|
||||
yaml.dump(template, f)
|
||||
|
||||
kubectl_cmd = self.KUBECTL_APPLY_CMD.format(
|
||||
task_id=task_id,
|
||||
docker_image=docker_image,
|
||||
queue_id=queue,
|
||||
)
|
||||
# make sure we provide a list
|
||||
if isinstance(kubectl_cmd, str):
|
||||
kubectl_cmd = kubectl_cmd.split()
|
||||
|
||||
kubectl_cmd += ["--labels=TRAINS=agent", "--command", "--", "/bin/sh", "-c",
|
||||
create_trains_conf + self.container_bash_script.format(task_id)]
|
||||
# add the template file at the end
|
||||
kubectl_cmd += [yaml_file]
|
||||
try:
|
||||
process = subprocess.Popen(kubectl_cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE)
|
||||
output, error = process.communicate()
|
||||
except Exception as ex:
|
||||
return None, str(ex)
|
||||
finally:
|
||||
safe_remove_file(yaml_file)
|
||||
|
||||
return output, error
|
||||
|
||||
def _kubectl_run(self, create_trains_conf, docker_image, labels, queue, task_data, task_id, queue_name):
|
||||
if callable(self.kubectl_cmd):
|
||||
kubectl_cmd = self.kubectl_cmd(task_id, docker_image, queue, task_data, queue_name)
|
||||
else:
|
||||
kubectl_cmd = self.kubectl_cmd.format(
|
||||
queue_name=queue_name,
|
||||
task_id=task_id,
|
||||
docker_image=docker_image,
|
||||
queue_id=queue
|
||||
)
|
||||
# make sure we provide a list
|
||||
if isinstance(kubectl_cmd, str):
|
||||
kubectl_cmd = kubectl_cmd.split()
|
||||
|
||||
if self.overrides_json_string:
|
||||
kubectl_cmd += ['--overrides=' + self.overrides_json_string]
|
||||
|
||||
if self.pod_limits:
|
||||
kubectl_cmd += ['--limits', ",".join(self.pod_limits)]
|
||||
if self.pod_requests:
|
||||
kubectl_cmd += ['--requests', ",".join(self.pod_requests)]
|
||||
|
||||
container_bash_script = [self.container_bash_script] if isinstance(self.container_bash_script, str) \
|
||||
else self.container_bash_script
|
||||
container_bash_script = ' ; '.join(container_bash_script)
|
||||
|
||||
kubectl_cmd += [
|
||||
"--labels=" + ",".join(labels),
|
||||
"--command",
|
||||
"--",
|
||||
"/bin/sh",
|
||||
"-c",
|
||||
"{} ; {}".format(create_trains_conf, container_bash_script.format(
|
||||
extra_bash_init_cmd=self.extra_bash_init_script, task_id=task_id)),
|
||||
]
|
||||
process = subprocess.Popen(kubectl_cmd, stdout=subprocess.PIPE, stderr=subprocess.PIPE)
|
||||
output, error = process.communicate()
|
||||
self.log.info("K8s scheduling experiment task id={}".format(task_id))
|
||||
if error:
|
||||
self.log.error("Running kubectl encountered an error: {}".format(
|
||||
error if isinstance(error, str) else error.decode()))
|
||||
return output, error
|
||||
|
||||
def run_tasks_loop(self, queues: List[Text], worker_params):
|
||||
def run_tasks_loop(self, queues: List[Text], worker_params, **kwargs):
|
||||
"""
|
||||
:summary: Pull and run tasks from queues.
|
||||
:description: 1. Go through ``queues`` by order.
|
||||
@@ -108,6 +449,7 @@ class K8sIntegration(Worker):
|
||||
events_service = self.get_service(Events)
|
||||
|
||||
# make sure we have a k8s pending queue
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
self._session.api_client.queues.create(self.k8s_pending_queue_name)
|
||||
except Exception:
|
||||
@@ -119,7 +461,7 @@ class K8sIntegration(Worker):
|
||||
while True:
|
||||
# iterate over queues (priority style, queues[0] is highest)
|
||||
for queue in queues:
|
||||
# delete old completed /failed pods
|
||||
# delete old completed / failed pods
|
||||
get_bash_output(self.KUBECTL_DELETE_CMD)
|
||||
|
||||
# get next task in queue
|
||||
@@ -155,15 +497,20 @@ class K8sIntegration(Worker):
|
||||
if self._session.config["agent.reload_config"]:
|
||||
self.reload_config()
|
||||
|
||||
def k8s_daemon(self, queues):
|
||||
def k8s_daemon(self, queue):
|
||||
"""
|
||||
Start the k8s Glue service.
|
||||
This service will be pulling tasks from *queues* and scheduling them for execution using kubectl.
|
||||
This service will be pulling tasks from *queue* and scheduling them for execution using kubectl.
|
||||
Notice all scheduled tasks are pushed back into K8S_PENDING_QUEUE,
|
||||
and popped when execution actually starts. This creates full visibility into the k8s scheduler.
|
||||
Manually popping a task from the K8S_PENDING_QUEUE,
|
||||
will cause the k8s scheduler to skip the execution once the scheduled tasks needs to be executed
|
||||
|
||||
:param list(str) queues: List of queue names to pull from
|
||||
:param list(str) queue: queue name to pull from
|
||||
"""
|
||||
return self.daemon(queues=queues, log_level=logging.INFO, foreground=True, docker=False)
|
||||
return self.daemon(queues=[ObjectID(name=queue)] if queue else None,
|
||||
log_level=logging.INFO, foreground=True, docker=False)
|
||||
|
||||
@classmethod
|
||||
def get_ssh_server_bash(cls, ssh_port_number):
|
||||
return ' ; '.join(line.format(port=ssh_port_number) for line in cls.BASH_INSTALL_SSH_CMD)
|
||||
|
||||
@@ -173,14 +173,32 @@ def normalize_path(*paths):
|
||||
|
||||
|
||||
def safe_remove_file(filename, error_message=None):
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
os.remove(filename)
|
||||
if filename:
|
||||
os.remove(filename)
|
||||
except Exception:
|
||||
if error_message:
|
||||
print(error_message)
|
||||
|
||||
|
||||
def get_python_path(script_dir, entry_point, package_api):
|
||||
def safe_remove_tree(filename):
|
||||
if not filename:
|
||||
return
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
shutil.rmtree(filename, ignore_errors=True)
|
||||
except Exception:
|
||||
pass
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
os.remove(filename)
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
|
||||
def get_python_path(script_dir, entry_point, package_api, is_conda_env=False):
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
python_path_sep = ';' if is_windows_platform() else ':'
|
||||
python_path_cmd = package_api.get_python_command(
|
||||
@@ -192,9 +210,9 @@ def get_python_path(script_dir, entry_point, package_api):
|
||||
(Path(script_dir) / Path(entry_point)).parent.absolute().as_posix(),
|
||||
python_path_sep=python_path_sep)
|
||||
if is_windows_platform():
|
||||
return python_path.replace('/', '\\') + org_python_path
|
||||
python_path = python_path.replace('/', '\\')
|
||||
|
||||
return python_path + org_python_path
|
||||
return python_path if is_conda_env else (python_path + org_python_path)
|
||||
except Exception:
|
||||
return None
|
||||
|
||||
@@ -442,9 +460,9 @@ def chain_map(*args):
|
||||
return reduce(lambda x, y: x.update(y) or x, args, {})
|
||||
|
||||
|
||||
def check_directory_path(path):
|
||||
def check_directory_path(path, check_whitespace_in_path=True):
|
||||
message = 'Could not create directory "{}": {}'
|
||||
if not is_windows_platform():
|
||||
if not is_windows_platform() and check_whitespace_in_path:
|
||||
match = re.search(r'\s', path)
|
||||
if match:
|
||||
raise CommandFailedError(
|
||||
@@ -537,6 +555,7 @@ class ExecutionInfo(NonStrictAttrs):
|
||||
branch = nullable_string
|
||||
version_num = nullable_string
|
||||
tag = nullable_string
|
||||
docker_cmd = nullable_string
|
||||
|
||||
@classmethod
|
||||
def from_task(cls, task_info):
|
||||
@@ -554,4 +573,24 @@ class ExecutionInfo(NonStrictAttrs):
|
||||
execution.entry_point = entry_point
|
||||
execution.working_dir = working_dir or ""
|
||||
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
execution.docker_cmd = task_info.execution.docker_cmd
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
return execution
|
||||
|
||||
|
||||
class safe_furl(furl.furl):
|
||||
|
||||
@property
|
||||
def port(self):
|
||||
return self._port
|
||||
|
||||
@port.setter
|
||||
def port(self, port):
|
||||
"""
|
||||
Any port value is valid
|
||||
"""
|
||||
self._port = port
|
||||
|
||||
@@ -9,7 +9,7 @@ from attr import attrs, attrib
|
||||
|
||||
import six
|
||||
from six import binary_type, text_type
|
||||
from trains_agent.helper.base import nonstrict_in_place_sort, create_tree
|
||||
from trains_agent.helper.base import nonstrict_in_place_sort
|
||||
|
||||
|
||||
def print_text(text, newline=True):
|
||||
@@ -22,15 +22,21 @@ def print_text(text, newline=True):
|
||||
sys.stdout.write(data)
|
||||
|
||||
|
||||
def decode_binary_lines(binary_lines, encoding='utf-8'):
|
||||
def decode_binary_lines(binary_lines, encoding='utf-8', replace_cr=False, overwrite_cr=False):
|
||||
# decode per line, if we failed decoding skip the line
|
||||
lines = []
|
||||
for b in binary_lines:
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
l = b.decode(encoding=encoding, errors='replace').replace('\r', '\n')
|
||||
except:
|
||||
l = ''
|
||||
lines.append(l + '\n' if l and l[-1] != '\n' else l)
|
||||
line = b.decode(encoding=encoding, errors='replace')
|
||||
if replace_cr:
|
||||
line = line.replace('\r', '\n')
|
||||
elif overwrite_cr:
|
||||
cr_lines = line.split('\r')
|
||||
line = cr_lines[-1] if cr_lines[-1] or len(cr_lines) < 2 else cr_lines[-2]
|
||||
except Exception:
|
||||
line = ''
|
||||
lines.append(line + '\n' if not line or line[-1] != '\n' else line)
|
||||
return lines
|
||||
|
||||
|
||||
|
||||
@@ -3,3 +3,15 @@ from typing import Callable, Dict, Any
|
||||
|
||||
def filter_keys(filter_, dct): # type: (Callable[[Any], bool], Dict) -> Dict
|
||||
return {key: value for key, value in dct.items() if filter_(key)}
|
||||
|
||||
|
||||
def merge_dicts(dict1, dict2):
|
||||
""" Recursively merges dict2 into dict1 """
|
||||
if not isinstance(dict1, dict) or not isinstance(dict2, dict):
|
||||
return dict2
|
||||
for k in dict2:
|
||||
if k in dict1:
|
||||
dict1[k] = merge_dicts(dict1[k], dict2[k])
|
||||
else:
|
||||
dict1[k] = dict2[k]
|
||||
return dict1
|
||||
|
||||
@@ -200,24 +200,30 @@ class GPUStatCollection(object):
|
||||
GPUStatCollection.global_processes[nv_process.pid] = \
|
||||
psutil.Process(pid=nv_process.pid)
|
||||
ps_process = GPUStatCollection.global_processes[nv_process.pid]
|
||||
process['username'] = ps_process.username()
|
||||
# cmdline returns full path;
|
||||
# as in `ps -o comm`, get short cmdnames.
|
||||
_cmdline = ps_process.cmdline()
|
||||
if not _cmdline:
|
||||
# sometimes, zombie or unknown (e.g. [kworker/8:2H])
|
||||
process['command'] = '?'
|
||||
process['full_command'] = ['?']
|
||||
else:
|
||||
process['command'] = os.path.basename(_cmdline[0])
|
||||
process['full_command'] = _cmdline
|
||||
# Bytes to MBytes
|
||||
process['gpu_memory_usage'] = nv_process.usedGpuMemory // MB
|
||||
process['cpu_percent'] = ps_process.cpu_percent()
|
||||
process['cpu_memory_usage'] = \
|
||||
round((ps_process.memory_percent() / 100.0) *
|
||||
psutil.virtual_memory().total)
|
||||
process['pid'] = nv_process.pid
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
# we do not actually use these, so no point in collecting them
|
||||
# process['username'] = ps_process.username()
|
||||
# # cmdline returns full path;
|
||||
# # as in `ps -o comm`, get short cmdnames.
|
||||
# _cmdline = ps_process.cmdline()
|
||||
# if not _cmdline:
|
||||
# # sometimes, zombie or unknown (e.g. [kworker/8:2H])
|
||||
# process['command'] = '?'
|
||||
# process['full_command'] = ['?']
|
||||
# else:
|
||||
# process['command'] = os.path.basename(_cmdline[0])
|
||||
# process['full_command'] = _cmdline
|
||||
# process['cpu_percent'] = ps_process.cpu_percent()
|
||||
# process['cpu_memory_usage'] = \
|
||||
# round((ps_process.memory_percent() / 100.0) *
|
||||
# psutil.virtual_memory().total)
|
||||
# Bytes to MBytes
|
||||
process['gpu_memory_usage'] = nv_process.usedGpuMemory // MB
|
||||
except Exception:
|
||||
# insufficient permissions
|
||||
pass
|
||||
return process
|
||||
|
||||
if not GPUStatCollection._gpu_device_info.get(index):
|
||||
@@ -285,12 +291,13 @@ class GPUStatCollection(object):
|
||||
# e.g. nvidia-smi reset or reboot the system
|
||||
pass
|
||||
|
||||
# TODO: Do not block if full process info is not requested
|
||||
time.sleep(0.1)
|
||||
for process in processes:
|
||||
pid = process['pid']
|
||||
cache_process = GPUStatCollection.global_processes[pid]
|
||||
process['cpu_percent'] = cache_process.cpu_percent()
|
||||
# we do not actually use these, so no point in collecting them
|
||||
# # TODO: Do not block if full process info is not requested
|
||||
# time.sleep(0.1)
|
||||
# for process in processes:
|
||||
# pid = process['pid']
|
||||
# cache_process = GPUStatCollection.global_processes[pid]
|
||||
# process['cpu_percent'] = cache_process.cpu_percent()
|
||||
|
||||
index = N.nvmlDeviceGetIndex(handle)
|
||||
gpu_info = {
|
||||
|
||||
@@ -5,7 +5,7 @@ from contextlib import contextmanager
|
||||
from typing import Text, Iterable, Union
|
||||
|
||||
import six
|
||||
from trains_agent.helper.base import mkstemp, safe_remove_file, join_lines
|
||||
from trains_agent.helper.base import mkstemp, safe_remove_file, join_lines, select_for_platform
|
||||
from trains_agent.helper.process import Executable, Argv, PathLike
|
||||
|
||||
|
||||
@@ -66,7 +66,20 @@ class PackageManager(object):
|
||||
pass
|
||||
|
||||
def upgrade_pip(self):
|
||||
return self._install("pip"+self.get_pip_version(), "--upgrade")
|
||||
result = self._install(
|
||||
select_for_platform(windows='"pip{}"', linux='pip{}').format(self.get_pip_version()), "--upgrade")
|
||||
packages = self.run_with_env(('list',), output=True).splitlines()
|
||||
# p.split is ('pip', 'x.y.z')
|
||||
pip = [p.split() for p in packages if len(p.split()) == 2 and p.split()[0] == 'pip']
|
||||
if pip:
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
from .requirements import MarkerRequirement
|
||||
pip = pip[0][1].split('.')
|
||||
MarkerRequirement.pip_new_version = bool(int(pip[0]) >= 20)
|
||||
except Exception:
|
||||
pass
|
||||
return result
|
||||
|
||||
def get_python_command(self, extra=()):
|
||||
# type: (...) -> Executable
|
||||
@@ -111,10 +124,12 @@ class PackageManager(object):
|
||||
def out_of_scope_install_package(cls, package_name, *args):
|
||||
if PackageManager._selected_manager is not None:
|
||||
try:
|
||||
return PackageManager._selected_manager._install(package_name, *args)
|
||||
result = PackageManager._selected_manager._install(package_name, *args)
|
||||
if result not in (0, None, True):
|
||||
return False
|
||||
except Exception:
|
||||
pass
|
||||
return
|
||||
return False
|
||||
return True
|
||||
|
||||
@classmethod
|
||||
def out_of_scope_freeze(cls):
|
||||
|
||||
@@ -2,8 +2,9 @@ from __future__ import unicode_literals
|
||||
|
||||
import json
|
||||
import re
|
||||
import shutil
|
||||
import os
|
||||
import subprocess
|
||||
from collections import OrderedDict
|
||||
from distutils.spawn import find_executable
|
||||
from functools import partial
|
||||
from itertools import chain
|
||||
@@ -14,17 +15,18 @@ import yaml
|
||||
from time import time
|
||||
from attr import attrs, attrib, Factory
|
||||
from pathlib2 import Path
|
||||
from requirements import parse
|
||||
from requirements.requirement import Requirement
|
||||
from trains_agent.external.requirements_parser import parse
|
||||
from trains_agent.external.requirements_parser.requirement import Requirement
|
||||
|
||||
from trains_agent.errors import CommandFailedError
|
||||
from trains_agent.helper.base import rm_tree, NonStrictAttrs, select_for_platform, is_windows_platform
|
||||
from trains_agent.helper.base import rm_tree, NonStrictAttrs, select_for_platform, is_windows_platform, ExecutionInfo
|
||||
from trains_agent.helper.process import Argv, Executable, DEVNULL, CommandSequence, PathLike
|
||||
from trains_agent.helper.package.requirements import SimpleVersion
|
||||
from trains_agent.session import Session
|
||||
from .base import PackageManager
|
||||
from .pip_api.venv import VirtualenvPip
|
||||
from .requirements import RequirementsManager, MarkerRequirement
|
||||
from ...backend_api.session.defs import ENV_CONDA_ENV_PACKAGE
|
||||
|
||||
package_normalize = partial(re.compile(r"""\[version=['"](.*)['"]\]""").sub, r"\1")
|
||||
|
||||
@@ -40,8 +42,8 @@ def _package_diff(path, packages):
|
||||
|
||||
class CondaPip(VirtualenvPip):
|
||||
def __init__(self, source=None, *args, **kwargs):
|
||||
super(CondaPip, self).__init__(*args, interpreter=Path(kwargs.get('path'), "python.exe") \
|
||||
if is_windows_platform() and kwargs.get('path') else None, **kwargs)
|
||||
super(CondaPip, self).__init__(*args, interpreter=Path(kwargs.get('path'), "python.exe")
|
||||
if is_windows_platform() and kwargs.get('path') else None, **kwargs)
|
||||
self.source = source
|
||||
|
||||
def run_with_env(self, command, output=False, **kwargs):
|
||||
@@ -61,8 +63,8 @@ class CondaAPI(PackageManager):
|
||||
|
||||
MINIMUM_VERSION = "4.3.30"
|
||||
|
||||
def __init__(self, session, path, python, requirements_manager):
|
||||
# type: (Session, PathLike, float, RequirementsManager) -> None
|
||||
def __init__(self, session, path, python, requirements_manager, execution_info=None, **kwargs):
|
||||
# type: (Session, PathLike, float, RequirementsManager, ExecutionInfo, Any) -> None
|
||||
"""
|
||||
:param python: base python version to use (e.g python3.6)
|
||||
:param path: path of env
|
||||
@@ -72,7 +74,15 @@ class CondaAPI(PackageManager):
|
||||
self.source = None
|
||||
self.requirements_manager = requirements_manager
|
||||
self.path = path
|
||||
self.env_read_only = False
|
||||
self.extra_channels = self.session.config.get('agent.package_manager.conda_channels', [])
|
||||
self.conda_env_as_base_docker = \
|
||||
self.session.config.get('agent.package_manager.conda_env_as_base_docker', None) or \
|
||||
bool(ENV_CONDA_ENV_PACKAGE.get())
|
||||
if ENV_CONDA_ENV_PACKAGE.get():
|
||||
self.conda_pre_build_env_path = ENV_CONDA_ENV_PACKAGE.get()
|
||||
else:
|
||||
self.conda_pre_build_env_path = execution_info.docker_cmd if execution_info else None
|
||||
self.pip = CondaPip(
|
||||
session=self.session,
|
||||
source=self.source,
|
||||
@@ -80,10 +90,15 @@ class CondaAPI(PackageManager):
|
||||
requirements_manager=self.requirements_manager,
|
||||
path=self.path,
|
||||
)
|
||||
self.conda = (
|
||||
find_executable("conda")
|
||||
or Argv(select_for_platform(windows="where", linux="which"), "conda").get_output(shell=True).strip()
|
||||
)
|
||||
try:
|
||||
self.conda = (
|
||||
find_executable("conda") or
|
||||
Argv(select_for_platform(windows="where", linux="which"), "conda").get_output(
|
||||
shell=select_for_platform(windows=True, linux=False)).strip()
|
||||
)
|
||||
except Exception:
|
||||
raise ValueError("ERROR: package manager \"conda\" selected, "
|
||||
"but \'conda\' executable could not be located")
|
||||
try:
|
||||
output = Argv(self.conda, "--version").get_output(stderr=subprocess.STDOUT)
|
||||
except subprocess.CalledProcessError as ex:
|
||||
@@ -111,13 +126,58 @@ class CondaAPI(PackageManager):
|
||||
def bin(self):
|
||||
return self.pip.bin
|
||||
|
||||
# noinspection SpellCheckingInspection
|
||||
def upgrade_pip(self):
|
||||
return self._install("pip" + self.pip.get_pip_version())
|
||||
# do not change pip version if pre built environement is used
|
||||
if self.env_read_only:
|
||||
print('Conda environment in read-only mode, skipping pip upgrade.')
|
||||
return ''
|
||||
return self._install(select_for_platform(windows='"pip{}"', linux='pip{}').format(self.pip.get_pip_version()))
|
||||
|
||||
def create(self):
|
||||
"""
|
||||
Create a new environment
|
||||
"""
|
||||
if self.conda_env_as_base_docker and self.conda_pre_build_env_path:
|
||||
if Path(self.conda_pre_build_env_path).is_dir():
|
||||
print("Using pre-existing Conda environment from {}".format(self.conda_pre_build_env_path))
|
||||
self.path = Path(self.conda_pre_build_env_path)
|
||||
self.source = ("conda", "activate", self.path.as_posix())
|
||||
self.pip = CondaPip(
|
||||
session=self.session,
|
||||
source=self.source,
|
||||
python=self.python,
|
||||
requirements_manager=self.requirements_manager,
|
||||
path=self.path,
|
||||
)
|
||||
conda_env = self._get_conda_sh()
|
||||
self.source = self.pip.source = CommandSequence(('source', conda_env.as_posix()), self.source)
|
||||
self.env_read_only = True
|
||||
return self
|
||||
elif Path(self.conda_pre_build_env_path).is_file():
|
||||
print("Restoring Conda environment from {}".format(self.conda_pre_build_env_path))
|
||||
tar_path = find_executable("tar")
|
||||
self.path.mkdir(parents=True, exist_ok=True)
|
||||
output = Argv(
|
||||
tar_path,
|
||||
"-xzf",
|
||||
self.conda_pre_build_env_path,
|
||||
"-C",
|
||||
self.path,
|
||||
).get_output()
|
||||
|
||||
self.source = self.pip.source = ("conda", "activate", self.path.as_posix())
|
||||
conda_env = self._get_conda_sh()
|
||||
self.source = self.pip.source = CommandSequence(('source', conda_env.as_posix()), self.source)
|
||||
# unpack cleanup
|
||||
print("Fixing prefix in Conda environment {}".format(self.path))
|
||||
CommandSequence(('source', conda_env.as_posix()),
|
||||
((self.path / 'bin' / 'conda-unpack').as_posix(), )).get_output()
|
||||
return self
|
||||
else:
|
||||
raise ValueError("Could not restore Conda environment, cannot find {}".format(
|
||||
self.conda_pre_build_env_path))
|
||||
|
||||
output = Argv(
|
||||
self.conda,
|
||||
"create",
|
||||
@@ -133,13 +193,15 @@ class CondaAPI(PackageManager):
|
||||
self.source = self.pip.source = (
|
||||
tuple(match.group(1).split()) + (match.group(2),)
|
||||
if match
|
||||
else ("activate", self.path)
|
||||
else ("conda", "activate", self.path.as_posix())
|
||||
)
|
||||
conda_env = Path(self.conda).parent.parent / 'etc' / 'profile.d' / 'conda.sh'
|
||||
|
||||
conda_env = self._get_conda_sh()
|
||||
if conda_env.is_file() and not is_windows_platform():
|
||||
self.source = self.pip.source = CommandSequence(('source', conda_env.as_posix()), self.source)
|
||||
|
||||
# install cuda toolkit
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
cuda_version = float(int(self.session.config['agent.cuda_version'])) / 10.0
|
||||
if cuda_version > 0:
|
||||
@@ -181,6 +243,10 @@ class CondaAPI(PackageManager):
|
||||
|
||||
def _install(self, *args):
|
||||
# type: (*PathLike) -> ()
|
||||
# if we are in read only mode, do not install anything
|
||||
if self.env_read_only:
|
||||
print('Conda environment in read-only mode, skipping package installing: {}'.format(args))
|
||||
return
|
||||
channels_args = tuple(
|
||||
chain.from_iterable(("-c", channel) for channel in self.extra_channels)
|
||||
)
|
||||
@@ -208,6 +274,10 @@ class CondaAPI(PackageManager):
|
||||
return self._install(*packages)
|
||||
|
||||
def uninstall_packages(self, *packages):
|
||||
# if we are in read only mode, do not uninstall anything
|
||||
if self.env_read_only:
|
||||
print('Conda environment in read-only mode, skipping package uninstalling: {}'.format(packages))
|
||||
return ''
|
||||
return self._run_command(("uninstall", "-p", self.path))
|
||||
|
||||
def install_from_file(self, path):
|
||||
@@ -226,23 +296,158 @@ class CondaAPI(PackageManager):
|
||||
with self.temp_file("pip_reqs", pip_packages) as reqs:
|
||||
self.pip.install_from_file(reqs)
|
||||
|
||||
def freeze(self):
|
||||
def freeze(self, freeze_full_environment=False):
|
||||
requirements = self.pip.freeze()
|
||||
req_lines = []
|
||||
conda_lines = []
|
||||
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
conda_packages = json.loads(self._run_command((self.conda, "list", "--json", "-p", self.path), raw=True))
|
||||
conda_packages_txt = []
|
||||
requirements_pip = [r.split('==')[0].strip().lower() for r in requirements['pip']]
|
||||
for pkg in conda_packages:
|
||||
# skip if this is a pypi package or it is not a python package at all
|
||||
if pkg['channel'] == 'pypi' or pkg['name'].lower() not in requirements_pip:
|
||||
pip_lines = requirements['pip']
|
||||
conda_packages_json = json.loads(
|
||||
self._run_command((self.conda, "list", "--json", "-p", self.path), raw=True))
|
||||
for r in conda_packages_json:
|
||||
# check if this is a pypi package, if it is, leave it outside
|
||||
if not r.get('channel') or r.get('channel') == 'pypi':
|
||||
name = (r['name'].replace('-', '_'), r['name'])
|
||||
pip_req_line = [l for l in pip_lines
|
||||
if l.split('==', 1)[0].strip() in name or l.split('@', 1)[0].strip() in name]
|
||||
if pip_req_line and \
|
||||
('@' not in pip_req_line[0] or
|
||||
not pip_req_line[0].split('@', 1)[1].strip().startswith('file://')):
|
||||
req_lines.append(pip_req_line[0])
|
||||
continue
|
||||
|
||||
req_lines.append(
|
||||
'{}=={}'.format(name[1], r['version']) if r.get('version') else '{}'.format(name[1]))
|
||||
continue
|
||||
conda_packages_txt.append('{0}{1}{2}'.format(pkg['name'], '==', pkg['version']))
|
||||
requirements['conda'] = conda_packages_txt
|
||||
except:
|
||||
|
||||
# check if we have it in our required packages
|
||||
name = r['name']
|
||||
# hack support pytorch/torch different naming convention
|
||||
if name == 'pytorch':
|
||||
name = 'torch'
|
||||
# skip over packages with _
|
||||
if name.startswith('_'):
|
||||
continue
|
||||
conda_lines.append('{}=={}'.format(name, r['version']) if r.get('version') else '{}'.format(name))
|
||||
# make sure we see the conda packages, put them into the pip as well
|
||||
if conda_lines:
|
||||
req_lines = ['# Conda Packages', ''] + conda_lines + ['', '# pip Packages', ''] + req_lines
|
||||
|
||||
requirements['pip'] = req_lines
|
||||
requirements['conda'] = conda_lines
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
if freeze_full_environment:
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
conda_env_json = json.loads(
|
||||
self._run_command((self.conda, "env", "export", "--json", "-p", self.path), raw=True))
|
||||
conda_env_json.pop('name', None)
|
||||
conda_env_json.pop('prefix', None)
|
||||
conda_env_json.pop('channels', None)
|
||||
requirements['conda_env_json'] = json.dumps(conda_env_json)
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
return requirements
|
||||
|
||||
def _load_conda_full_env(self, conda_env_dict, requirements):
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
cuda_version = int(self.session.config.get('agent.cuda_version', 0))
|
||||
except Exception:
|
||||
cuda_version = 0
|
||||
|
||||
conda_env_dict['channels'] = self.extra_channels
|
||||
if 'dependencies' not in conda_env_dict:
|
||||
conda_env_dict['dependencies'] = []
|
||||
new_dependencies = OrderedDict()
|
||||
pip_requirements = None
|
||||
for line in conda_env_dict['dependencies']:
|
||||
if isinstance(line, dict):
|
||||
pip_requirements = line.pop('pip', None)
|
||||
continue
|
||||
name = line.strip().split('=', 1)[0].lower()
|
||||
if name == 'pip':
|
||||
continue
|
||||
elif name == 'python':
|
||||
line = 'python={}'.format('.'.join(line.split('=')[1].split('.')[:2]))
|
||||
elif name == 'tensorflow-gpu' and cuda_version == 0:
|
||||
line = 'tensorflow={}'.format(line.split('=')[1])
|
||||
elif name == 'tensorflow' and cuda_version > 0:
|
||||
line = 'tensorflow-gpu={}'.format(line.split('=')[1])
|
||||
elif name in ('cupti', 'cudnn'):
|
||||
# cudatoolkit should pull them based on the cudatoolkit version
|
||||
continue
|
||||
elif name.startswith('_'):
|
||||
continue
|
||||
new_dependencies[line.split('=', 1)[0].strip()] = line
|
||||
|
||||
# fix packages:
|
||||
conda_env_dict['dependencies'] = list(new_dependencies.values())
|
||||
|
||||
with self.temp_file("conda_env", yaml.dump(conda_env_dict), suffix=".yml") as name:
|
||||
print('Conda: Trying to install requirements:\n{}'.format(conda_env_dict['dependencies']))
|
||||
result = self._run_command(
|
||||
("env", "update", "-p", self.path, "--file", name)
|
||||
)
|
||||
|
||||
# check if we need to remove specific packages
|
||||
bad_req = self._parse_conda_result_bad_packges(result)
|
||||
if bad_req:
|
||||
print('failed installing the following conda packages: {}'.format(bad_req))
|
||||
return False
|
||||
|
||||
if pip_requirements:
|
||||
# create a list of vcs packages that we need to replace in the pip section
|
||||
vcs_reqs = {}
|
||||
if 'pip' in requirements:
|
||||
pip_lines = requirements['pip'].splitlines() \
|
||||
if isinstance(requirements['pip'], six.string_types) else requirements['pip']
|
||||
for line in pip_lines:
|
||||
try:
|
||||
marker = list(parse(line))
|
||||
except Exception:
|
||||
marker = None
|
||||
if not marker:
|
||||
continue
|
||||
|
||||
m = MarkerRequirement(marker[0])
|
||||
if m.vcs:
|
||||
vcs_reqs[m.name] = m
|
||||
try:
|
||||
pip_req_str = [str(vcs_reqs.get(r.split('=', 1)[0], r)) for r in pip_requirements
|
||||
if not r.startswith('pip=') and not r.startswith('virtualenv=')]
|
||||
print('Conda: Installing requirements: step 2 - using pip:\n{}'.format(pip_req_str))
|
||||
PackageManager._selected_manager = self.pip
|
||||
self.pip.load_requirements({'pip': '\n'.join(pip_req_str)})
|
||||
except Exception as e:
|
||||
print(e)
|
||||
raise e
|
||||
finally:
|
||||
PackageManager._selected_manager = self
|
||||
|
||||
self.requirements_manager.post_install(self.session)
|
||||
|
||||
def load_requirements(self, requirements):
|
||||
# if we are in read only mode, do not uninstall anything
|
||||
if self.env_read_only:
|
||||
print('Conda environment in read-only mode, skipping requirements installation.')
|
||||
return None
|
||||
|
||||
# if we have a full conda environment, use it and pass the pip to pip
|
||||
if requirements.get('conda_env_json'):
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
conda_env_json = json.loads(requirements.get('conda_env_json'))
|
||||
print('Conda restoring full yaml environment')
|
||||
return self._load_conda_full_env(conda_env_json, requirements)
|
||||
except Exception:
|
||||
print('Could not load fully stored conda environment, falling back to requirements')
|
||||
|
||||
# create new environment file
|
||||
conda_env = dict()
|
||||
conda_env['channels'] = self.extra_channels
|
||||
@@ -276,6 +481,15 @@ class CondaAPI(PackageManager):
|
||||
if m.vcs:
|
||||
pip_requirements.append(m)
|
||||
continue
|
||||
# Skip over pip
|
||||
if m.name in ('pip', 'virtualenv', ):
|
||||
continue
|
||||
# python version, only major.minor
|
||||
if m.name == 'python' and m.specs:
|
||||
m.specs = [(m.specs[0][0], '.'.join(m.specs[0][1].split('.')[:2])), ]
|
||||
if '.' not in m.specs[0][1]:
|
||||
continue
|
||||
|
||||
conda_supported_req_names.append(m.name.lower())
|
||||
if m.req.name.lower() == 'matplotlib':
|
||||
has_matplotlib = True
|
||||
@@ -303,15 +517,20 @@ class CondaAPI(PackageManager):
|
||||
continue
|
||||
|
||||
m = MarkerRequirement(marker[0])
|
||||
# skip over local files (we cannot change the version to a local file)
|
||||
if m.local_file:
|
||||
continue
|
||||
m_name = m.name.lower()
|
||||
if m_name in conda_supported_req_names:
|
||||
# this package is in the conda list,
|
||||
# make sure that if we changed version and we match it in conda
|
||||
conda_supported_req_names.remove(m_name)
|
||||
## conda_supported_req_names.remove(m_name)
|
||||
for cr in reqs:
|
||||
if m_name == cr.name.lower():
|
||||
if m_name.lower().replace('_', '-') == cr.name.lower().replace('_', '-'):
|
||||
# match versions
|
||||
cr.specs = m.specs
|
||||
# # conda always likes "-" not "_" but only on pypi packages
|
||||
# cr.name = cr.name.lower().replace('_', '-')
|
||||
break
|
||||
else:
|
||||
# not in conda, it is a pip package
|
||||
@@ -319,29 +538,39 @@ class CondaAPI(PackageManager):
|
||||
if m_name == 'matplotlib':
|
||||
has_matplotlib = True
|
||||
|
||||
# remove any leftover conda packages (they were removed from the pip list)
|
||||
if conda_supported_req_names:
|
||||
reqs = [r for r in reqs if r.name.lower() not in conda_supported_req_names]
|
||||
|
||||
# Conda requirements Hacks:
|
||||
if has_matplotlib:
|
||||
reqs.append(MarkerRequirement(Requirement.parse('graphviz')))
|
||||
reqs.append(MarkerRequirement(Requirement.parse('python-graphviz')))
|
||||
reqs.append(MarkerRequirement(Requirement.parse('kiwisolver')))
|
||||
|
||||
# remove specific cudatoolkit, it should have being preinstalled.
|
||||
# allow to override default cudatoolkit, but not the derivative packages, cudatoolkit should pull them
|
||||
reqs = [r for r in reqs if r.name not in ('cudnn', 'cupti')]
|
||||
|
||||
if has_torch and cuda_version == 0:
|
||||
reqs.append(MarkerRequirement(Requirement.parse('cpuonly')))
|
||||
|
||||
# make sure we have no double entries
|
||||
reqs = list(OrderedDict((r.name, r) for r in reqs).values())
|
||||
|
||||
# conform conda packages (version/name)
|
||||
for r in reqs:
|
||||
# change _ to - in name but not the prefix _ (as this is conda prefix)
|
||||
if not r.name.startswith('_') and not requirements.get('conda', None):
|
||||
r.name = r.name.replace('_', '-')
|
||||
# remove .post from version numbers, it fails ~= version, and change == to ~=
|
||||
if r.specs and r.specs[0]:
|
||||
r.specs = [(r.specs[0][0].replace('==', '~='), r.specs[0][1].split('.post')[0])]
|
||||
# conda always likes "-" not "_"
|
||||
r.req.name = r.req.name.replace('_', '-')
|
||||
|
||||
while reqs:
|
||||
# notice, we give conda more freedom in version selection, to help it choose best combination
|
||||
conda_env['dependencies'] = [r.tostr() for r in reqs]
|
||||
def clean_ver(ar):
|
||||
if not ar.specs:
|
||||
return ar.tostr()
|
||||
ar.specs = [(ar.specs[0][0], ar.specs[0][1] + '.0' if '.' not in ar.specs[0][1] else ar.specs[0][1])]
|
||||
return ar.tostr()
|
||||
conda_env['dependencies'] = [clean_ver(r) for r in reqs]
|
||||
with self.temp_file("conda_env", yaml.dump(conda_env), suffix=".yml") as name:
|
||||
print('Conda: Trying to install requirements:\n{}'.format(conda_env['dependencies']))
|
||||
result = self._run_command(
|
||||
@@ -371,14 +600,17 @@ class CondaAPI(PackageManager):
|
||||
|
||||
if pip_requirements:
|
||||
try:
|
||||
pip_req_str = [r.tostr() for r in pip_requirements]
|
||||
pip_req_str = [r.tostr() for r in pip_requirements if r.name not in ('pip', 'virtualenv', )]
|
||||
print('Conda: Installing requirements: step 2 - using pip:\n{}'.format(pip_req_str))
|
||||
self.pip.load_requirements('\n'.join(pip_req_str))
|
||||
PackageManager._selected_manager = self.pip
|
||||
self.pip.load_requirements({'pip': '\n'.join(pip_req_str)})
|
||||
except Exception as e:
|
||||
print(e)
|
||||
raise e
|
||||
finally:
|
||||
PackageManager._selected_manager = self
|
||||
|
||||
self.requirements_manager.post_install()
|
||||
self.requirements_manager.post_install(self.session)
|
||||
return True
|
||||
|
||||
def _parse_conda_result_bad_packges(self, result_dict):
|
||||
@@ -441,8 +673,22 @@ class CondaAPI(PackageManager):
|
||||
def get_python_command(self, extra=()):
|
||||
return CommandSequence(self.source, self.pip.get_python_command(extra=extra))
|
||||
|
||||
def _get_conda_sh(self):
|
||||
# type () -> Path
|
||||
base_conda_env = Path(self.conda).parent.parent / 'etc' / 'profile.d' / 'conda.sh'
|
||||
if base_conda_env.is_file():
|
||||
return base_conda_env
|
||||
for path in os.environ.get('PATH', '').split(select_for_platform(windows=';', linux=':')):
|
||||
conda = find_executable("conda", path=path)
|
||||
if not conda:
|
||||
continue
|
||||
conda_env = Path(conda).parent.parent / 'etc' / 'profile.d' / 'conda.sh'
|
||||
if conda_env.is_file():
|
||||
return conda_env
|
||||
return base_conda_env
|
||||
|
||||
# enable hashing with cmp=False because pdb fails on unhashable exceptions
|
||||
|
||||
# enable hashing with cmp=False because pdb fails on un-hashable exceptions
|
||||
exception = attrs(str=True, cmp=False)
|
||||
|
||||
|
||||
|
||||
@@ -1,25 +0,0 @@
|
||||
from typing import Text
|
||||
|
||||
from .base import PackageManager
|
||||
from .requirements import SimpleSubstitution
|
||||
|
||||
|
||||
class CythonRequirement(SimpleSubstitution):
|
||||
|
||||
name = ("cython", "numpy", )
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
super(CythonRequirement, self).__init__(*args, **kwargs)
|
||||
|
||||
def match(self, req):
|
||||
# match both Cython & cython
|
||||
return req.name and req.name.lower() in self.name
|
||||
|
||||
def replace(self, req):
|
||||
"""
|
||||
Replace a requirement
|
||||
:raises: ValueError if version is pre-release
|
||||
"""
|
||||
# install Cython before
|
||||
PackageManager.out_of_scope_install_package(str(req))
|
||||
return Text(req)
|
||||
@@ -1,8 +1,10 @@
|
||||
import re
|
||||
from collections import OrderedDict
|
||||
from typing import Text
|
||||
|
||||
from .base import PackageManager
|
||||
from .requirements import SimpleSubstitution
|
||||
from ..base import safe_furl as furl
|
||||
|
||||
|
||||
class ExternalRequirements(SimpleSubstitution):
|
||||
@@ -20,9 +22,11 @@ class ExternalRequirements(SimpleSubstitution):
|
||||
return False
|
||||
if not req.req or not req.req.line or not req.req.line.strip() or req.req.line.strip().startswith('#'):
|
||||
return False
|
||||
if req.pip_new_version and not (req.req.editable or req.req.vcs):
|
||||
return False
|
||||
return True
|
||||
|
||||
def post_install(self):
|
||||
def post_install(self, session):
|
||||
post_install_req = self.post_install_req
|
||||
self.post_install_req = []
|
||||
for req in post_install_req:
|
||||
@@ -30,15 +34,50 @@ class ExternalRequirements(SimpleSubstitution):
|
||||
freeze_base = PackageManager.out_of_scope_freeze() or ''
|
||||
except:
|
||||
freeze_base = ''
|
||||
PackageManager.out_of_scope_install_package(req.tostr(markers=False), "--no-deps")
|
||||
try:
|
||||
freeze_post = PackageManager.out_of_scope_freeze() or ''
|
||||
package_name = list(set(freeze_post['pip']) - set(freeze_base['pip']))
|
||||
if package_name and package_name[0] not in self.post_install_req_lookup:
|
||||
self.post_install_req_lookup[package_name[0]] = req.req.line
|
||||
except:
|
||||
pass
|
||||
PackageManager.out_of_scope_install_package(req.tostr(markers=False), "--ignore-installed")
|
||||
|
||||
req_line = req.tostr(markers=False)
|
||||
if req_line.strip().startswith('-e ') or req_line.strip().startswith('--editable'):
|
||||
req_line = re.sub(r'^(-e|--editable=?)\s*', '', req_line, count=1)
|
||||
|
||||
if req.req.vcs and req_line.startswith('git+'):
|
||||
try:
|
||||
url_no_frag = furl(req_line)
|
||||
url_no_frag.set(fragment=None)
|
||||
# reverse replace
|
||||
fragment = req_line[::-1].replace(url_no_frag.url[::-1], '', 1)[::-1]
|
||||
vcs_url = req_line[4:]
|
||||
# reverse replace
|
||||
vcs_url = vcs_url[::-1].replace(fragment[::-1], '', 1)[::-1]
|
||||
from ..repo import Git
|
||||
vcs = Git(session=session, url=vcs_url, location=None, revision=None)
|
||||
vcs._set_ssh_url()
|
||||
new_req_line = 'git+{}{}'.format(vcs.url_with_auth, fragment)
|
||||
if new_req_line != req_line:
|
||||
furl_line = furl(new_req_line)
|
||||
print('Replacing original pip vcs \'{}\' with \'{}\''.format(
|
||||
req_line,
|
||||
furl_line.set(password='xxxxxx').tostr() if furl_line.password else new_req_line))
|
||||
req_line = new_req_line
|
||||
except Exception:
|
||||
print('WARNING: Failed parsing pip git install, using original line {}'.format(req_line))
|
||||
|
||||
# if we have older pip version we have to make sure we replace back the package name with the
|
||||
# git repository link. In new versions this is supported and we get "package @ git+https://..."
|
||||
if not req.pip_new_version:
|
||||
PackageManager.out_of_scope_install_package(req_line, "--no-deps")
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
freeze_post = PackageManager.out_of_scope_freeze() or ''
|
||||
package_name = list(set(freeze_post['pip']) - set(freeze_base['pip']))
|
||||
if package_name and package_name[0] not in self.post_install_req_lookup:
|
||||
self.post_install_req_lookup[package_name[0]] = req.req.line
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
# no need to force reinstall, pip will always rebuilt if the package comes from git
|
||||
# and make sure the required packages are installed (if they are not it will install them)
|
||||
if not PackageManager.out_of_scope_install_package(req_line):
|
||||
raise ValueError("Failed installing GIT/HTTPs package \'{}\'".format(req_line))
|
||||
|
||||
def replace(self, req):
|
||||
"""
|
||||
@@ -51,10 +90,17 @@ class ExternalRequirements(SimpleSubstitution):
|
||||
return Text('')
|
||||
|
||||
def replace_back(self, list_of_requirements):
|
||||
if 'pip' in list_of_requirements:
|
||||
original_requirements = list_of_requirements['pip']
|
||||
list_of_requirements['pip'] = [r for r in original_requirements
|
||||
if r not in self.post_install_req_lookup]
|
||||
list_of_requirements['pip'] += [self.post_install_req_lookup.get(r, '')
|
||||
for r in self.post_install_req_lookup.keys() if r in original_requirements]
|
||||
if not list_of_requirements:
|
||||
return list_of_requirements
|
||||
|
||||
for k in list_of_requirements:
|
||||
# k is either pip/conda
|
||||
if k not in ('pip', 'conda'):
|
||||
continue
|
||||
|
||||
original_requirements = list_of_requirements[k]
|
||||
list_of_requirements[k] = [r for r in original_requirements
|
||||
if r not in self.post_install_req_lookup]
|
||||
list_of_requirements[k] += [self.post_install_req_lookup.get(r, '')
|
||||
for r in self.post_install_req_lookup.keys() if r in original_requirements]
|
||||
return list_of_requirements
|
||||
|
||||
@@ -1,32 +0,0 @@
|
||||
from typing import Text
|
||||
|
||||
from .base import PackageManager
|
||||
from .requirements import SimpleSubstitution
|
||||
|
||||
|
||||
class HorovodRequirement(SimpleSubstitution):
|
||||
|
||||
name = "horovod"
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
super(HorovodRequirement, self).__init__(*args, **kwargs)
|
||||
self.post_install_req = None
|
||||
|
||||
def match(self, req):
|
||||
# match both horovod
|
||||
return req.name and self.name == req.name.lower()
|
||||
|
||||
def post_install(self):
|
||||
if self.post_install_req:
|
||||
PackageManager.out_of_scope_install_package(self.post_install_req.tostr(markers=False))
|
||||
self.post_install_req = None
|
||||
|
||||
def replace(self, req):
|
||||
"""
|
||||
Replace a requirement
|
||||
:raises: ValueError if version is pre-release
|
||||
"""
|
||||
# Store in post req install, and return nothing
|
||||
self.post_install_req = req
|
||||
# mark skip package, we will install it in post install hook
|
||||
return Text('')
|
||||
@@ -1,6 +1,8 @@
|
||||
from typing import Any
|
||||
|
||||
from pathlib2 import Path
|
||||
|
||||
from trains_agent.helper.base import select_for_platform, rm_tree
|
||||
from trains_agent.helper.base import select_for_platform, rm_tree, ExecutionInfo
|
||||
from trains_agent.helper.package.base import PackageManager
|
||||
from trains_agent.helper.process import Argv, PathLike
|
||||
from trains_agent.session import Session
|
||||
@@ -9,8 +11,8 @@ from ..requirements import RequirementsManager
|
||||
|
||||
|
||||
class VirtualenvPip(SystemPip, PackageManager):
|
||||
def __init__(self, session, python, requirements_manager, path, interpreter=None):
|
||||
# type: (Session, float, RequirementsManager, PathLike, PathLike) -> ()
|
||||
def __init__(self, session, python, requirements_manager, path, interpreter=None, execution_info=None, **kwargs):
|
||||
# type: (Session, float, RequirementsManager, PathLike, PathLike, ExecutionInfo, Any) -> ()
|
||||
"""
|
||||
Program interface to virtualenv pip.
|
||||
Must be given either path to virtualenv or source command.
|
||||
@@ -37,7 +39,7 @@ class VirtualenvPip(SystemPip, PackageManager):
|
||||
if isinstance(requirements, dict) and requirements.get("pip"):
|
||||
requirements["pip"] = self.requirements_manager.replace(requirements["pip"])
|
||||
super(VirtualenvPip, self).load_requirements(requirements)
|
||||
self.requirements_manager.post_install()
|
||||
self.requirements_manager.post_install(self.session)
|
||||
|
||||
def create_flags(self):
|
||||
"""
|
||||
|
||||
48
trains_agent/helper/package/post_req.py
Normal file
48
trains_agent/helper/package/post_req.py
Normal file
@@ -0,0 +1,48 @@
|
||||
from typing import Text
|
||||
|
||||
from .base import PackageManager
|
||||
from .requirements import SimpleSubstitution
|
||||
|
||||
|
||||
class PostRequirement(SimpleSubstitution):
|
||||
|
||||
name = ("horovod", )
|
||||
optional_package_names = tuple()
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
super(PostRequirement, self).__init__(*args, **kwargs)
|
||||
self.post_install_req = []
|
||||
# check if we need to replace the packages:
|
||||
post_packages = self.config.get('agent.package_manager.post_packages', None)
|
||||
if post_packages:
|
||||
self.__class__.name = post_packages
|
||||
post_optional_packages = self.config.get('agent.package_manager.post_optional_packages', None)
|
||||
if post_optional_packages:
|
||||
self.__class__.optional_package_names = post_optional_packages
|
||||
|
||||
def match(self, req):
|
||||
# match both horovod
|
||||
return req.name and (req.name.lower() in self.name or req.name.lower() in self.optional_package_names)
|
||||
|
||||
def post_install(self, session):
|
||||
for req in self.post_install_req:
|
||||
if req.name in self.optional_package_names:
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
PackageManager.out_of_scope_install_package(req.tostr(markers=False))
|
||||
except Exception:
|
||||
pass
|
||||
else:
|
||||
PackageManager.out_of_scope_install_package(req.tostr(markers=False))
|
||||
|
||||
self.post_install_req = []
|
||||
|
||||
def replace(self, req):
|
||||
"""
|
||||
Replace a requirement
|
||||
:raises: ValueError if version is pre-release
|
||||
"""
|
||||
# Store in post req install, and return nothing
|
||||
self.post_install_req.append(req)
|
||||
# mark skip package, we will install it in post install hook
|
||||
return Text('')
|
||||
75
trains_agent/helper/package/priority_req.py
Normal file
75
trains_agent/helper/package/priority_req.py
Normal file
@@ -0,0 +1,75 @@
|
||||
from typing import Text
|
||||
|
||||
from .base import PackageManager
|
||||
from .requirements import SimpleSubstitution
|
||||
|
||||
|
||||
class PriorityPackageRequirement(SimpleSubstitution):
|
||||
|
||||
name = ("cython", "numpy", "setuptools", )
|
||||
optional_package_names = tuple()
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
super(PriorityPackageRequirement, self).__init__(*args, **kwargs)
|
||||
# check if we need to replace the packages:
|
||||
priority_packages = self.config.get('agent.package_manager.priority_packages', None)
|
||||
if priority_packages:
|
||||
self.__class__.name = priority_packages
|
||||
priority_optional_packages = self.config.get('agent.package_manager.priority_optional_packages', None)
|
||||
if priority_optional_packages:
|
||||
self.__class__.optional_package_names = priority_optional_packages
|
||||
|
||||
def match(self, req):
|
||||
# match both Cython & cython
|
||||
return req.name and (req.name.lower() in self.name or req.name.lower() in self.optional_package_names)
|
||||
|
||||
def replace(self, req):
|
||||
"""
|
||||
Replace a requirement
|
||||
:raises: ValueError if version is pre-release
|
||||
"""
|
||||
if req.name in self.optional_package_names:
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
if PackageManager.out_of_scope_install_package(str(req)):
|
||||
return Text(req)
|
||||
except Exception:
|
||||
pass
|
||||
return Text('')
|
||||
PackageManager.out_of_scope_install_package(str(req))
|
||||
return Text(req)
|
||||
|
||||
|
||||
class PackageCollectorRequirement(SimpleSubstitution):
|
||||
"""
|
||||
This RequirementSubstitution class will allow you to have multiple instances of the same
|
||||
package, it will output the last one (by order) to be actually used.
|
||||
"""
|
||||
name = tuple()
|
||||
|
||||
def __init__(self, session, collect_package):
|
||||
super(PackageCollectorRequirement, self).__init__(session)
|
||||
self._collect_packages = collect_package or tuple()
|
||||
self._last_req = None
|
||||
|
||||
def match(self, req):
|
||||
# match package names
|
||||
return req.name and req.name.lower() in self._collect_packages
|
||||
|
||||
def replace(self, req):
|
||||
"""
|
||||
Replace a requirement
|
||||
:raises: ValueError if version is pre-release
|
||||
"""
|
||||
self._last_req = req.clone()
|
||||
return ''
|
||||
|
||||
def post_scan_add_req(self):
|
||||
"""
|
||||
Allows the RequirementSubstitution to add an extra line/requirements after
|
||||
the initial requirements scan is completed.
|
||||
Called only once per requirements.txt object
|
||||
"""
|
||||
last_req = self._last_req
|
||||
self._last_req = None
|
||||
return last_req
|
||||
@@ -82,6 +82,8 @@ class SimplePytorchRequirement(SimpleSubstitution):
|
||||
92: 'https://download.pytorch.org/whl/cu92/torch_stable.html',
|
||||
100: 'https://download.pytorch.org/whl/cu100/torch_stable.html',
|
||||
101: 'https://download.pytorch.org/whl/cu101/torch_stable.html',
|
||||
102: 'https://download.pytorch.org/whl/cu102/torch_stable.html',
|
||||
110: 'https://download.pytorch.org/whl/cu110/torch_stable.html',
|
||||
}
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
@@ -117,20 +119,24 @@ class SimplePytorchRequirement(SimpleSubstitution):
|
||||
|
||||
@classmethod
|
||||
def get_torch_page(cls, cuda_version, nightly=False):
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
cuda = int(cuda_version)
|
||||
except:
|
||||
except Exception:
|
||||
cuda = 0
|
||||
|
||||
if nightly:
|
||||
# then try the nightly builds, it might be there...
|
||||
torch_url = cls.nightly_page_lookup_template.format(cuda)
|
||||
try:
|
||||
if requests.get(torch_url, timeout=10).ok:
|
||||
cls.torch_page_lookup[cuda] = torch_url
|
||||
return cls.torch_page_lookup[cuda], cuda
|
||||
except Exception:
|
||||
pass
|
||||
for c in range(cuda, max(-1, cuda-15), -1):
|
||||
# then try the nightly builds, it might be there...
|
||||
torch_url = cls.nightly_page_lookup_template.format(c)
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
if requests.get(torch_url, timeout=10).ok:
|
||||
print('Torch nightly CUDA {} download page found'.format(c))
|
||||
cls.torch_page_lookup[c] = torch_url
|
||||
return cls.torch_page_lookup[c], c
|
||||
except Exception:
|
||||
pass
|
||||
return
|
||||
|
||||
# first check if key is valid
|
||||
@@ -138,13 +144,16 @@ class SimplePytorchRequirement(SimpleSubstitution):
|
||||
return cls.torch_page_lookup[cuda], cuda
|
||||
|
||||
# then try a new cuda version page
|
||||
torch_url = cls.page_lookup_template.format(cuda)
|
||||
try:
|
||||
if requests.get(torch_url, timeout=10).ok:
|
||||
cls.torch_page_lookup[cuda] = torch_url
|
||||
return cls.torch_page_lookup[cuda], cuda
|
||||
except Exception:
|
||||
pass
|
||||
for c in range(cuda, max(-1, cuda-15), -1):
|
||||
torch_url = cls.page_lookup_template.format(c)
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
if requests.get(torch_url, timeout=10).ok:
|
||||
print('Torch CUDA {} download page found'.format(c))
|
||||
cls.torch_page_lookup[c] = torch_url
|
||||
return cls.torch_page_lookup[c], c
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
keys = sorted(cls.torch_page_lookup.keys(), reverse=True)
|
||||
for k in keys:
|
||||
@@ -157,7 +166,7 @@ class SimplePytorchRequirement(SimpleSubstitution):
|
||||
class PytorchRequirement(SimpleSubstitution):
|
||||
|
||||
name = "torch"
|
||||
packages = ("torch", "torchvision", "torchaudio")
|
||||
packages = ("torch", "torchvision", "torchaudio", "torchcsprng", "torchtext")
|
||||
|
||||
def __init__(self, *args, **kwargs):
|
||||
os_name = kwargs.pop("os_override", None)
|
||||
@@ -235,6 +244,7 @@ class PytorchRequirement(SimpleSubstitution):
|
||||
py_ver = self.python_major_minor_str.replace('.', '')
|
||||
url = None
|
||||
last_v = None
|
||||
closest_v = None
|
||||
# search for our package
|
||||
for l in links_parser.links:
|
||||
parts = l.split('/')[-1].split('-')
|
||||
@@ -244,73 +254,94 @@ class PytorchRequirement(SimpleSubstitution):
|
||||
continue
|
||||
# version (ignore +cpu +cu92 etc. + is %2B in the file link)
|
||||
# version ignore .postX suffix (treat as regular version)
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
v = str(parts[1].split('%')[0].split('+')[0])
|
||||
except Exception:
|
||||
continue
|
||||
if len(parts) < 3 or not parts[2].endswith(py_ver):
|
||||
continue
|
||||
if len(parts) < 5 or platform_wheel not in parts[4]:
|
||||
continue
|
||||
# update the closest matched version (from above)
|
||||
if not closest_v:
|
||||
closest_v = v
|
||||
elif SimpleVersion.compare_versions(
|
||||
version_a=closest_v, op='>=', version_b=v, num_parts=3) and \
|
||||
SimpleVersion.compare_versions(
|
||||
version_a=v, op='>=', version_b=req.specs[0][1], num_parts=3):
|
||||
closest_v = v
|
||||
# check if this an actual match
|
||||
if not req.compare_version(v) or \
|
||||
(last_v and SimpleVersion.compare_versions(last_v, '>', v, ignore_sub_versions=False)):
|
||||
continue
|
||||
if not parts[2].endswith(py_ver):
|
||||
continue
|
||||
if platform_wheel not in parts[4]:
|
||||
continue
|
||||
|
||||
url = '/'.join(torch_url.split('/')[:-1] + l.split('/'))
|
||||
last_v = v
|
||||
# if we found an exact match, use it
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
if req.specs[0][0] == '==' and \
|
||||
SimpleVersion.compare_versions(req.specs[0][1], '==', v, ignore_sub_versions=False):
|
||||
break
|
||||
except:
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
return url
|
||||
return url, last_v or closest_v
|
||||
|
||||
def get_url_for_platform(self, req):
|
||||
# check if package is already installed with system packages
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
if self.config.get("agent.package_manager.system_site_packages"):
|
||||
if self.config.get("agent.package_manager.system_site_packages", None):
|
||||
from pip._internal.commands.show import search_packages_info
|
||||
installed_torch = list(search_packages_info([req.name]))
|
||||
# notice the comparision order, the first part will make sure we have a valid installed package
|
||||
if installed_torch[0]['version'] and req.compare_version(installed_torch[0]['version']):
|
||||
# notice the comparison order, the first part will make sure we have a valid installed package
|
||||
if installed_torch and installed_torch[0]['version'] and \
|
||||
req.compare_version(installed_torch[0]['version']):
|
||||
print('PyTorch: requested "{}" version {}, using pre-installed version {}'.format(
|
||||
req.name, req.specs[0] if req.specs else 'unspecified', installed_torch[0]['version']))
|
||||
# package already installed, do nothing
|
||||
return str(req), True
|
||||
except:
|
||||
req.specs = [('==', str(installed_torch[0]['version']))]
|
||||
return '{} {} {}'.format(req.name, req.specs[0][0], req.specs[0][1]), True
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
# make sure we have a specific version to retrieve
|
||||
if not req.specs:
|
||||
req.specs = [('>', '0')]
|
||||
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
req.specs[0] = (req.specs[0][0], req.specs[0][1].split('+')[0])
|
||||
except:
|
||||
except Exception:
|
||||
pass
|
||||
op, version = req.specs[0]
|
||||
# assert op == "=="
|
||||
|
||||
torch_url, torch_url_key = SimplePytorchRequirement.get_torch_page(self.cuda_version)
|
||||
url = self._get_link_from_torch_page(req, torch_url)
|
||||
if not url and self.config.get("agent.package_manager.torch_nightly"):
|
||||
url, closest_matched_version = self._get_link_from_torch_page(req, torch_url)
|
||||
if not url and self.config.get("agent.package_manager.torch_nightly", None):
|
||||
torch_url, torch_url_key = SimplePytorchRequirement.get_torch_page(self.cuda_version, nightly=True)
|
||||
url = self._get_link_from_torch_page(req, torch_url)
|
||||
url, closest_matched_version = self._get_link_from_torch_page(req, torch_url)
|
||||
# try one more time, with a lower cuda version (never fallback to CPU):
|
||||
while not url and torch_url_key > 0:
|
||||
previous_cuda_key = torch_url_key
|
||||
print('Warning, could not locate PyTorch {} matching CUDA version {}, best candidate {}\n'.format(
|
||||
req, previous_cuda_key, closest_matched_version))
|
||||
url, closest_matched_version = self._get_link_from_torch_page(req, torch_url)
|
||||
if url:
|
||||
break
|
||||
torch_url, torch_url_key = SimplePytorchRequirement.get_torch_page(int(torch_url_key)-1)
|
||||
# never fallback to CPU
|
||||
if torch_url_key < 1:
|
||||
print('Warning! Could not locate PyTorch version {} matching CUDA version {}'.format(
|
||||
req, previous_cuda_key))
|
||||
raise ValueError('Could not locate PyTorch version {} matching CUDA version {}'.format(
|
||||
req, self.cuda_version))
|
||||
print('Warning! Could not locate PyTorch version {} matching CUDA version {}, trying CUDA version {}'.format(
|
||||
req, previous_cuda_key, torch_url_key))
|
||||
url = self._get_link_from_torch_page(req, torch_url)
|
||||
print(
|
||||
'Error! Could not locate PyTorch version {} matching CUDA version {}'.format(
|
||||
req, previous_cuda_key))
|
||||
raise ValueError(
|
||||
'Could not locate PyTorch version {} matching CUDA version {}'.format(req, self.cuda_version))
|
||||
else:
|
||||
print('Trying PyTorch CUDA version {} support'.format(torch_url_key))
|
||||
|
||||
if not url:
|
||||
url = PytorchWheel(
|
||||
@@ -322,6 +353,8 @@ class PytorchRequirement(SimpleSubstitution):
|
||||
if url:
|
||||
# normalize url (sometimes we will get ../ which we should not...
|
||||
url = '/'.join(url.split('/')[:3]) + urllib.parse.quote(str(furl(url).path.normalize()))
|
||||
# print found
|
||||
print('Found PyTorch version {} matching CUDA version {}'.format(req, torch_url_key))
|
||||
|
||||
self.log.debug("checking url: %s", url)
|
||||
return url, requests.head(url, timeout=10).ok
|
||||
@@ -457,7 +490,13 @@ class PytorchRequirement(SimpleSubstitution):
|
||||
if req.req.name == parts[0]:
|
||||
# support for pip >= 20.1
|
||||
if '@' in line:
|
||||
lines[i] = '{} # {}'.format(str(req), str(new_req))
|
||||
# skip if we have nothing to add
|
||||
if str(req).strip() != str(new_req).strip():
|
||||
# if this is local file and use the version detection
|
||||
if req.local_file:
|
||||
lines[i] = '{}'.format(str(new_req))
|
||||
else:
|
||||
lines[i] = '{} # {}'.format(str(req), str(new_req))
|
||||
else:
|
||||
lines[i] = '{} # {}'.format(line, str(new_req))
|
||||
break
|
||||
|
||||
@@ -4,7 +4,7 @@ import operator
|
||||
import os
|
||||
import re
|
||||
from abc import ABCMeta, abstractmethod
|
||||
from copy import deepcopy
|
||||
from copy import deepcopy, copy
|
||||
from itertools import chain, starmap
|
||||
from operator import itemgetter
|
||||
from os import path
|
||||
@@ -12,15 +12,15 @@ from typing import Text, List, Type, Optional, Tuple, Dict
|
||||
|
||||
from pathlib2 import Path
|
||||
from pyhocon import ConfigTree
|
||||
from requirements import parse
|
||||
# noinspection PyPackageRequirements
|
||||
from requirements.requirement import Requirement
|
||||
|
||||
import six
|
||||
from trains_agent.definitions import PIP_EXTRA_INDICES
|
||||
from trains_agent.helper.base import warning, is_conda, which, join_lines, is_windows_platform
|
||||
from trains_agent.helper.process import Argv, PathLike
|
||||
from trains_agent.session import Session, normalize_cuda_version
|
||||
from trains_agent.external.requirements_parser import parse
|
||||
from trains_agent.external.requirements_parser.requirement import Requirement
|
||||
|
||||
from .translator import RequirementsTranslator
|
||||
|
||||
|
||||
@@ -35,6 +35,10 @@ class FatalSpecsResolutionError(Exception):
|
||||
@six.python_2_unicode_compatible
|
||||
class MarkerRequirement(object):
|
||||
|
||||
# if True pip version above 20.x and with support for "package @ scheme://link"
|
||||
# default is True
|
||||
pip_new_version = True
|
||||
|
||||
def __init__(self, req): # type: (Requirement) -> None
|
||||
self.req = req
|
||||
|
||||
@@ -54,7 +58,21 @@ class MarkerRequirement(object):
|
||||
|
||||
if self.specifier:
|
||||
parts.append(self.format_specs())
|
||||
|
||||
elif self.vcs:
|
||||
# leave the line as is, let pip handle it
|
||||
if self.line:
|
||||
return self.line
|
||||
else:
|
||||
# let's build the line manually
|
||||
parts = [
|
||||
self.uri,
|
||||
'@{}'.format(self.revision) if self.revision else '',
|
||||
'#subdirectory={}'.format(self.subdirectory) if self.subdirectory else ''
|
||||
]
|
||||
elif self.pip_new_version and self.uri and self.name and self.line and self.local_file:
|
||||
# package @ file:///example.com/somewheel.whl
|
||||
# leave the line as is, let pip handle it
|
||||
return self.line
|
||||
else:
|
||||
parts = [self.uri]
|
||||
|
||||
@@ -63,6 +81,9 @@ class MarkerRequirement(object):
|
||||
|
||||
return ''.join(parts)
|
||||
|
||||
def clone(self):
|
||||
return MarkerRequirement(copy(self.req))
|
||||
|
||||
__str__ = tostr
|
||||
|
||||
def __repr__(self):
|
||||
@@ -128,7 +149,8 @@ class MarkerRequirement(object):
|
||||
version = self.specs[0][1]
|
||||
op = (op or self.specs[0][0]).strip()
|
||||
|
||||
return SimpleVersion.compare_versions(requested_version, op, version)
|
||||
return SimpleVersion.compare_versions(
|
||||
version_a=requested_version, op=op, version_b=version, num_parts=num_parts)
|
||||
|
||||
|
||||
class SimpleVersion:
|
||||
@@ -167,7 +189,7 @@ class SimpleVersion:
|
||||
_regex = re.compile(r"^\s*" + VERSION_PATTERN + r"\s*$", re.VERBOSE | re.IGNORECASE)
|
||||
|
||||
@classmethod
|
||||
def compare_versions(cls, version_a, op, version_b, ignore_sub_versions=True):
|
||||
def compare_versions(cls, version_a, op, version_b, ignore_sub_versions=True, num_parts=3):
|
||||
"""
|
||||
Compare two versions based on the op operator
|
||||
returns bool(version_a op version_b)
|
||||
@@ -178,12 +200,12 @@ class SimpleVersion:
|
||||
:param str version_b:
|
||||
:param bool ignore_sub_versions: if true compare only major.minor.patch
|
||||
(ignore a/b/rc/post/dev in the comparison)
|
||||
:param int num_parts: number of parts to compare, split by . (dot)
|
||||
:return bool: version_a op version_b
|
||||
"""
|
||||
|
||||
if not version_b:
|
||||
return True
|
||||
num_parts = 3
|
||||
|
||||
if op == '~=':
|
||||
num_parts = max(num_parts, 2)
|
||||
@@ -316,7 +338,15 @@ class RequirementSubstitution(object):
|
||||
"""
|
||||
pass
|
||||
|
||||
def post_install(self):
|
||||
def post_scan_add_req(self): # type: () -> Optional[MarkerRequirement]
|
||||
"""
|
||||
Allows the RequirementSubstitution to add an extra line/requirements after
|
||||
the initial requirements scan is completed.
|
||||
Called only once per requirements.txt object
|
||||
"""
|
||||
return None
|
||||
|
||||
def post_install(self, session):
|
||||
pass
|
||||
|
||||
@classmethod
|
||||
@@ -470,16 +500,28 @@ class RequirementsManager(object):
|
||||
)
|
||||
if not conda:
|
||||
result = map(self.translator.translate, result)
|
||||
|
||||
result = list(result)
|
||||
# add post scan add requirements call back
|
||||
for h in self.handlers:
|
||||
req = h.post_scan_add_req()
|
||||
if req:
|
||||
result.append(req.tostr())
|
||||
|
||||
return join_lines(result)
|
||||
|
||||
def post_install(self):
|
||||
def post_install(self, session):
|
||||
for h in self.handlers:
|
||||
try:
|
||||
h.post_install()
|
||||
h.post_install(session)
|
||||
except Exception as ex:
|
||||
print('RequirementsManager handler {} raised exception: {}'.format(h, ex))
|
||||
raise
|
||||
|
||||
def replace_back(self, requirements):
|
||||
if self.translator:
|
||||
requirements = self.translator.replace_back(requirements)
|
||||
|
||||
for h in self.handlers:
|
||||
try:
|
||||
requirements = h.replace_back(requirements)
|
||||
|
||||
@@ -23,6 +23,7 @@ class RequirementsTranslator(object):
|
||||
Path(self.cache_dir).mkdir(parents=True, exist_ok=True)
|
||||
self.config = Config()
|
||||
self.pip = SystemPip(interpreter=interpreter, session=self._session)
|
||||
self._translate_back = {}
|
||||
|
||||
def download(self, url):
|
||||
self.pip.download_package(url, cache_dir=self.cache_dir)
|
||||
@@ -60,4 +61,30 @@ class RequirementsTranslator(object):
|
||||
except Exception:
|
||||
command.error('Could not download wheel name of "{}"'.format(line))
|
||||
return line
|
||||
|
||||
self._translate_back[str(downloaded)] = line
|
||||
|
||||
return downloaded
|
||||
|
||||
def replace_back(self, requirements):
|
||||
if not requirements:
|
||||
return requirements
|
||||
|
||||
for k in requirements:
|
||||
# k is either pip/conda
|
||||
if k not in ('pip', 'conda'):
|
||||
continue
|
||||
|
||||
original_requirements = requirements[k]
|
||||
new_requirements = []
|
||||
for line in original_requirements:
|
||||
local_file = [d for d in self._translate_back.keys() if d in line]
|
||||
if local_file:
|
||||
local_file = local_file[0]
|
||||
new_requirements.append(line.replace(local_file, self._translate_back[local_file]))
|
||||
else:
|
||||
new_requirements.append(line)
|
||||
|
||||
requirements[k] = new_requirements
|
||||
|
||||
return requirements
|
||||
|
||||
@@ -11,6 +11,7 @@ from copy import deepcopy
|
||||
from distutils.spawn import find_executable
|
||||
from itertools import chain, repeat, islice
|
||||
from os.path import devnull
|
||||
from time import sleep
|
||||
from typing import Union, Text, Sequence, Any, TypeVar, Callable
|
||||
|
||||
import psutil
|
||||
@@ -41,6 +42,30 @@ def get_bash_output(cmd, strip=False, stderr=subprocess.STDOUT, stdin=False):
|
||||
return output if not strip or not output else output.strip()
|
||||
|
||||
|
||||
def terminate_process(pid, timeout=10.):
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
proc = psutil.Process(pid)
|
||||
proc.terminate()
|
||||
cnt = 0
|
||||
while proc.is_running() and cnt < timeout:
|
||||
sleep(1.)
|
||||
cnt += 1
|
||||
proc.terminate()
|
||||
cnt = 0
|
||||
while proc.is_running() and cnt < timeout:
|
||||
sleep(1.)
|
||||
cnt += 1
|
||||
proc.kill()
|
||||
except Exception:
|
||||
pass
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
return not psutil.Process(pid).is_running()
|
||||
except Exception:
|
||||
return True
|
||||
|
||||
|
||||
def kill_all_child_processes(pid=None):
|
||||
# get current process if pid not provided
|
||||
include_parent = True
|
||||
|
||||
@@ -5,7 +5,7 @@ import subprocess
|
||||
from distutils.spawn import find_executable
|
||||
from hashlib import md5
|
||||
from os import environ, getenv
|
||||
from typing import Text, Sequence, Mapping, Iterable, TypeVar, Callable, Tuple
|
||||
from typing import Text, Sequence, Mapping, Iterable, TypeVar, Callable, Tuple, Optional
|
||||
|
||||
import attr
|
||||
from furl import furl
|
||||
@@ -13,7 +13,7 @@ from pathlib2 import Path
|
||||
|
||||
import six
|
||||
|
||||
from trains_agent.definitions import ENV_AGENT_GIT_USER, ENV_AGENT_GIT_PASS
|
||||
from trains_agent.definitions import ENV_AGENT_GIT_USER, ENV_AGENT_GIT_PASS, ENV_AGENT_GIT_HOST
|
||||
from trains_agent.helper.console import ensure_text, ensure_binary
|
||||
from trains_agent.errors import CommandFailedError
|
||||
from trains_agent.helper.base import (
|
||||
@@ -97,7 +97,7 @@ class VCS(object):
|
||||
:param session: program session
|
||||
:param url: repository url
|
||||
:param location: (desired) clone location
|
||||
:param: desired clone revision
|
||||
:param revision: desired clone revision
|
||||
"""
|
||||
self.session = session
|
||||
self.log = self.session.get_logger(
|
||||
@@ -150,12 +150,23 @@ class VCS(object):
|
||||
"""
|
||||
Apply patch repository at `location`
|
||||
"""
|
||||
self.log.info("applying diff to %s", location)
|
||||
self.log.info("applying diff to %s" % location)
|
||||
|
||||
for match in filter(
|
||||
None, map(self.PATCH_ADDED_FILE_RE.match, patch_content.splitlines())
|
||||
):
|
||||
create_file_if_not_exists(normalize_path(location, match.group("path")))
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
for match in filter(
|
||||
None, map(self.PATCH_ADDED_FILE_RE.match, patch_content.splitlines())
|
||||
):
|
||||
file_path = None
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
file_path = normalize_path(location, match.group("path"))
|
||||
create_file_if_not_exists(file_path)
|
||||
except Exception:
|
||||
if file_path:
|
||||
self.log.warning("failed creating file for git diff (%s)" % file_path)
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
return_code, errors = self.call_with_stdin(
|
||||
patch_content, *self.patch_base, cwd=location
|
||||
@@ -208,7 +219,7 @@ class VCS(object):
|
||||
)
|
||||
|
||||
@classmethod
|
||||
def resolve_ssh_url(cls, url):
|
||||
def replace_ssh_url(cls, url):
|
||||
# type: (Text) -> Text
|
||||
"""
|
||||
Replace SSH URL with HTTPS URL when applicable
|
||||
@@ -242,20 +253,58 @@ class VCS(object):
|
||||
).url
|
||||
return url
|
||||
|
||||
@classmethod
|
||||
def replace_http_url(cls, url, port=None):
|
||||
# type: (Text, Optional[int]) -> Text
|
||||
"""
|
||||
Replace HTTPS URL with SSH URL when applicable
|
||||
"""
|
||||
parsed_url = furl(url)
|
||||
if parsed_url.scheme == "https":
|
||||
parsed_url.scheme = "ssh"
|
||||
parsed_url.username = "git"
|
||||
parsed_url.password = None
|
||||
# make sure there is no port in the final url (safe_furl support)
|
||||
# the original port was an https port, and we do not know if there is a different ssh port,
|
||||
# so we have to clear the original port specified (https) and use the default ssh schema port.
|
||||
parsed_url.port = port or None
|
||||
url = parsed_url.url
|
||||
return url
|
||||
|
||||
def _set_ssh_url(self):
|
||||
"""
|
||||
Replace instance URL with SSH substitution result and report to log.
|
||||
According to ``man ssh-add``, ``SSH_AUTH_SOCK`` must be set in order for ``ssh-add`` to work.
|
||||
"""
|
||||
if self.session.config.get('agent.force_git_ssh_protocol', None) and self.url:
|
||||
parsed_url = furl(self.url)
|
||||
# only apply to a specific domain (if requested)
|
||||
config_domain = \
|
||||
ENV_AGENT_GIT_HOST.get() or self.session.config.get("agent.git_host", None)
|
||||
if config_domain and config_domain != parsed_url.host:
|
||||
return
|
||||
if parsed_url.scheme == "https":
|
||||
new_url = self.replace_http_url(
|
||||
self.url, port=self.session.config.get('agent.force_git_ssh_port', None))
|
||||
if new_url != self.url:
|
||||
print("Using SSH credentials - replacing https url '{}' with ssh url '{}'".format(
|
||||
self.url, new_url))
|
||||
self.url = new_url
|
||||
return
|
||||
|
||||
if not self.session.config.agent.translate_ssh:
|
||||
return
|
||||
|
||||
ssh_agent_variable = "SSH_AUTH_SOCK"
|
||||
if not getenv(ssh_agent_variable) and (
|
||||
(ENV_AGENT_GIT_USER.get() or self.session.config.get('agent.git_user', None)) and
|
||||
(ENV_AGENT_GIT_PASS.get() or self.session.config.get('agent.git_pass', None))
|
||||
):
|
||||
new_url = self.resolve_ssh_url(self.url)
|
||||
# if we have git_user / git_pass replace ssh credentials with https authentication
|
||||
if (ENV_AGENT_GIT_USER.get() or self.session.config.get('agent.git_user', None)) and \
|
||||
(ENV_AGENT_GIT_PASS.get() or self.session.config.get('agent.git_pass', None)):
|
||||
# only apply to a specific domain (if requested)
|
||||
config_domain = \
|
||||
ENV_AGENT_GIT_HOST.get() or self.session.config.get("git_host", None)
|
||||
if config_domain and config_domain != furl(self.url).host:
|
||||
return
|
||||
|
||||
new_url = self.replace_ssh_url(self.url)
|
||||
if new_url != self.url:
|
||||
print("Using user/pass credentials - replacing ssh url '{}' with https url '{}'".format(
|
||||
self.url, new_url))
|
||||
@@ -332,9 +381,10 @@ class VCS(object):
|
||||
"""
|
||||
Run command with `input_` as stdin
|
||||
"""
|
||||
input_ = input_.encode("latin1")
|
||||
if not input_.endswith(b"\n"):
|
||||
input_ += b"\n"
|
||||
input_ = input_.encode("utf-8")
|
||||
# always add extra empty line
|
||||
# (there is no downside, and it solves empty lines issue at end of patch cause corrupt message)
|
||||
input_ += b"\n"
|
||||
process = self._call_subprocess(
|
||||
subprocess.Popen,
|
||||
argv,
|
||||
@@ -396,15 +446,20 @@ class VCS(object):
|
||||
Add username and password to URL if missing from URL and present in config.
|
||||
Does not modify ssh URLs.
|
||||
"""
|
||||
parsed_url = furl(url)
|
||||
try:
|
||||
parsed_url = furl(url)
|
||||
except ValueError:
|
||||
return url
|
||||
if parsed_url.scheme in ["", "ssh"] or parsed_url.scheme.startswith("git"):
|
||||
return parsed_url.url
|
||||
config_user = ENV_AGENT_GIT_USER.get() or config.get("agent.{}_user".format(cls.executable_name), None)
|
||||
config_pass = ENV_AGENT_GIT_PASS.get() or config.get("agent.{}_pass".format(cls.executable_name), None)
|
||||
config_domain = ENV_AGENT_GIT_HOST.get() or config.get("agent.{}_host".format(cls.executable_name), None)
|
||||
if (
|
||||
(not (parsed_url.username and parsed_url.password))
|
||||
and config_user
|
||||
and config_pass
|
||||
and (not config_domain or config_domain.lower() == parsed_url.host)
|
||||
):
|
||||
parsed_url.set(username=config_user, password=config_pass)
|
||||
return parsed_url.url
|
||||
@@ -479,7 +534,7 @@ class Git(VCS):
|
||||
root=Argv(executable_name, "rev-parse", "--show-toplevel"),
|
||||
)
|
||||
|
||||
patch_base = ("apply",)
|
||||
patch_base = ("apply", "--unidiff-zero", )
|
||||
|
||||
|
||||
class Hg(VCS):
|
||||
|
||||
170
trains_agent/helper/runtime_verification.py
Normal file
170
trains_agent/helper/runtime_verification.py
Normal file
@@ -0,0 +1,170 @@
|
||||
import re
|
||||
from datetime import datetime, timedelta
|
||||
|
||||
from typing import List, Tuple, Optional
|
||||
|
||||
from trains_agent.backend_config.defs import UptimeConf
|
||||
|
||||
DAYS = ["SUN", "MON", "TUE", "WED", "THU", "FRI", "SAT"]
|
||||
PATTERN = re.compile(r"^(?P<hours>[^\s]+)\s(?P<days>[^\s]+)")
|
||||
|
||||
|
||||
def check_runtime(ranges_list, is_uptime=True):
|
||||
# type: (List[str], bool) -> bool
|
||||
for entry in ranges_list:
|
||||
|
||||
days_list = get_days_list(entry)
|
||||
if not check_day(days_list):
|
||||
continue
|
||||
|
||||
hours_list = get_hours_list(entry)
|
||||
if check_hour(hours_list):
|
||||
return is_uptime
|
||||
return not is_uptime
|
||||
|
||||
|
||||
def check_hour(hours):
|
||||
# type: (List[str]) -> bool
|
||||
return datetime.now().hour in hours
|
||||
|
||||
|
||||
def check_day(days):
|
||||
# type: (List[str]) -> bool
|
||||
return datetime.now().strftime("%a").upper() in days
|
||||
|
||||
|
||||
def get_days_list(entry):
|
||||
# type: (str) -> List[str]
|
||||
days_intervals = PATTERN.match(entry)["days"].split(",")
|
||||
days_total = []
|
||||
for days in days_intervals:
|
||||
start, end = days.split("-") if "-" in days else (days, days)
|
||||
try:
|
||||
days_total.extend(
|
||||
[*range(DAYS.index(start.upper()), DAYS.index(end.upper()) + 1)]
|
||||
)
|
||||
except ValueError:
|
||||
print(
|
||||
"Warning: days interval '{}' is invalid, use intervals of the format <start>-<end>."
|
||||
" make sure to use the abbreviated format SUN-SAT".format(days)
|
||||
)
|
||||
continue
|
||||
return [DAYS[day] for day in days_total]
|
||||
|
||||
|
||||
def get_hours_list(entry):
|
||||
# type: (str) -> List[str]
|
||||
hours_intervals = PATTERN.match(entry)["hours"].split(",")
|
||||
hours_total = []
|
||||
for hours in hours_intervals:
|
||||
start, end = get_start_end_hours(hours)
|
||||
if not (start and end):
|
||||
continue
|
||||
hours_total.extend([*range(start, end)])
|
||||
return hours_total
|
||||
|
||||
|
||||
def get_start_end_hours(hours):
|
||||
# type: (str) -> Tuple[int, int]
|
||||
try:
|
||||
start, end = (
|
||||
tuple(map(int, hours.split("-"))) if "-" in hours else (int(hours), 24)
|
||||
)
|
||||
except Exception as ex:
|
||||
print(
|
||||
"Warning: hours interval '{}' is invalid, use intervals of the format <start>-<end>".format(
|
||||
hours, ex
|
||||
)
|
||||
)
|
||||
start, end = (None, None)
|
||||
if end == 0:
|
||||
end = 24
|
||||
return start, end
|
||||
|
||||
|
||||
def print_uptime_properties(
|
||||
ranges_list, queues_info, runtime_properties, is_uptime=True
|
||||
):
|
||||
# type: (List[str], List[dict], List[dict], bool) -> None
|
||||
if ranges_list:
|
||||
uptime_string = ["Working hours {} configurations".format("uptime" if is_uptime else "downtime")]
|
||||
uptime_string.extend(get_uptime_string(entry) for entry in ranges_list)
|
||||
else:
|
||||
uptime_string = ["No uptime/downtime configurations found"]
|
||||
|
||||
is_server_forced, server_string = get_runtime_properties_string(runtime_properties)
|
||||
is_queue_forced, queues_string = get_queues_tags_string(queues_info)
|
||||
|
||||
res = list(
|
||||
filter(
|
||||
len,
|
||||
[
|
||||
"\n".join(uptime_string),
|
||||
"\nCurrently forced {}".format(is_queue_forced or is_server_forced)
|
||||
if is_queue_forced or is_server_forced
|
||||
else " ",
|
||||
server_string,
|
||||
queues_string,
|
||||
],
|
||||
)
|
||||
)
|
||||
print("\n".join(res))
|
||||
|
||||
|
||||
def get_uptime_string(entry):
|
||||
# type: (str) -> str
|
||||
res = []
|
||||
days_list = get_days_list(entry)
|
||||
hours_intervals = PATTERN.match(entry)["hours"].split(",")
|
||||
for hours in hours_intervals:
|
||||
start, end = get_start_end_hours(hours)
|
||||
if not (start and end):
|
||||
continue
|
||||
res.append(
|
||||
" - {}:00-{}:59 on {}".format(start, end - 1, ' and '.join(days_list))
|
||||
if not (start == end)
|
||||
else ""
|
||||
)
|
||||
return "\n".join(res)
|
||||
|
||||
|
||||
def get_runtime_properties_string(runtime_properties):
|
||||
# type: (List[dict]) -> Tuple[Optional[str], str]
|
||||
server_string = []
|
||||
force_flag = next(
|
||||
(prop for prop in runtime_properties if prop["key"] == UptimeConf.worker_key),
|
||||
None,
|
||||
)
|
||||
is_server_forced = None
|
||||
if force_flag:
|
||||
is_server_forced = force_flag["value"].upper()
|
||||
expiry_hour = (
|
||||
(datetime.now() + timedelta(seconds=force_flag["expiry"])).strftime("%H:%M")
|
||||
if force_flag["expiry"]
|
||||
else None
|
||||
)
|
||||
expires = " expires at {}".format(expiry_hour) if expiry_hour else ""
|
||||
server_string.append(
|
||||
" - Server runtime property '{}: {}'{}".format(force_flag['key'], force_flag['value'], expires)
|
||||
)
|
||||
return is_server_forced, "\n".join(server_string)
|
||||
|
||||
|
||||
def get_queues_tags_string(queues_info):
|
||||
# type: (List[dict]) -> Tuple[Optional[str], str]
|
||||
queues_string = []
|
||||
is_queue_forced = None
|
||||
for queue in queues_info:
|
||||
if "force_workers:off" in queue.get("tags", []):
|
||||
tag = "force_workers:off"
|
||||
is_queue_forced = is_queue_forced or "OFF"
|
||||
elif "force_workers:on" in queue.get("tags", []):
|
||||
tag = "force_workers:on"
|
||||
is_queue_forced = "ON"
|
||||
else:
|
||||
tag = None
|
||||
tagged = " (tagged '{}')'".format(tag) if tag else ""
|
||||
queues_string.append(
|
||||
" - Listening to queue '{}'{}".format(queue.get('name', ''), tagged)
|
||||
)
|
||||
return is_queue_forced, "\n".join(queues_string)
|
||||
@@ -4,6 +4,8 @@ from time import sleep
|
||||
from glob import glob
|
||||
from tempfile import gettempdir, NamedTemporaryFile
|
||||
|
||||
from typing import List, Tuple, Optional
|
||||
|
||||
from trains_agent.definitions import ENV_DOCKER_HOST_MOUNT
|
||||
from trains_agent.helper.base import warning
|
||||
|
||||
@@ -37,6 +39,10 @@ class Singleton(object):
|
||||
except:
|
||||
pass
|
||||
|
||||
@classmethod
|
||||
def get_lock_filename(cls):
|
||||
return os.path.join(cls._get_temp_folder(), cls._lock_file_name)
|
||||
|
||||
@classmethod
|
||||
def register_instance(cls, unique_worker_id=None, worker_name=None, api_client=None, allow_double=False):
|
||||
"""
|
||||
@@ -47,7 +53,7 @@ class Singleton(object):
|
||||
:return: (str worker_id, int slot_number) Return None value on instance already running
|
||||
"""
|
||||
# try to lock file
|
||||
lock_file = os.path.join(cls._get_temp_folder(), cls._lock_file_name)
|
||||
lock_file = cls.get_lock_filename()
|
||||
timeout = 0
|
||||
while os.path.exists(lock_file):
|
||||
if timeout > cls._lock_timeout:
|
||||
@@ -79,30 +85,42 @@ class Singleton(object):
|
||||
return ret
|
||||
|
||||
@classmethod
|
||||
def _register_instance(cls, unique_worker_id=None, worker_name=None, api_client=None, allow_double=False):
|
||||
if cls.worker_id:
|
||||
return cls.worker_id, cls.instance_slot
|
||||
# make sure we have a unique name
|
||||
instance_num = 0
|
||||
def get_running_pids(cls):
|
||||
# type: () -> List[Tuple[int, Optional[str], Optional[int], str]]
|
||||
temp_folder = cls._get_temp_folder()
|
||||
files = glob(os.path.join(temp_folder, cls.prefix + cls.sep + '*' + cls.ext))
|
||||
slots = {}
|
||||
pids = []
|
||||
for file in files:
|
||||
parts = file.split(cls.sep)
|
||||
parts = os.path.basename(file).split(cls.sep)
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
pid = int(parts[1])
|
||||
if not psutil.pid_exists(pid):
|
||||
pid = -1
|
||||
except Exception:
|
||||
# something is wrong, use non existing pid and delete the file
|
||||
pid = -1
|
||||
|
||||
uid, slot = None, None
|
||||
# noinspection PyBroadException
|
||||
try:
|
||||
with open(file, 'r') as f:
|
||||
uid, slot = str(f.read()).split('\n')
|
||||
slot = int(slot)
|
||||
except Exception:
|
||||
pass
|
||||
pids.append((pid, uid, slot, file))
|
||||
|
||||
return pids
|
||||
|
||||
@classmethod
|
||||
def _register_instance(cls, unique_worker_id=None, worker_name=None, api_client=None, allow_double=False):
|
||||
if cls.worker_id:
|
||||
return cls.worker_id, cls.instance_slot
|
||||
# make sure we have a unique name
|
||||
instance_num = 0
|
||||
slots = {}
|
||||
for pid, uid, slot, file in cls.get_running_pids():
|
||||
worker = None
|
||||
if api_client and ENV_DOCKER_HOST_MOUNT.get() and uid:
|
||||
try:
|
||||
@@ -111,7 +129,7 @@ class Singleton(object):
|
||||
worker = None
|
||||
|
||||
# count active instances and delete dead files
|
||||
if not worker and not psutil.pid_exists(pid):
|
||||
if not worker and pid < 0:
|
||||
# delete the file
|
||||
try:
|
||||
os.remove(os.path.join(file))
|
||||
@@ -165,3 +183,9 @@ class Singleton(object):
|
||||
@classmethod
|
||||
def get_slot(cls):
|
||||
return cls.instance_slot or 0
|
||||
|
||||
@classmethod
|
||||
def get_pid_file(cls):
|
||||
if not cls._pid_file:
|
||||
return None
|
||||
return cls._pid_file.name
|
||||
|
||||
@@ -68,6 +68,10 @@ DAEMON_ARGS = dict({
|
||||
'dest': 'queues',
|
||||
'type': foreign_object_id('queues'),
|
||||
},
|
||||
'--order-fairness': {
|
||||
'help': 'Pull from each queue in a round-robin order, instead of priority order.',
|
||||
'action': 'store_true',
|
||||
},
|
||||
'--standalone-mode': {
|
||||
'help': 'Do not use any network connects, assume everything is pre-installed',
|
||||
'action': 'store_true',
|
||||
@@ -85,7 +89,28 @@ DAEMON_ARGS = dict({
|
||||
'action': 'store_true',
|
||||
'aliases': ['-d'],
|
||||
},
|
||||
|
||||
'--stop': {
|
||||
'help': 'Stop the running agent (based on the same set of arguments)',
|
||||
'action': 'store_true',
|
||||
},
|
||||
'--uptime': {
|
||||
'help': 'Specify uptime for trains-agent in "<hours> <days>" format. for example, use "17-20 TUE" to set '
|
||||
'Tuesday\'s uptime to 17-20'
|
||||
'Note: Make sure to have only one of uptime/downtime configuration and not both.',
|
||||
'nargs': '*',
|
||||
'default': None,
|
||||
},
|
||||
'--downtime': {
|
||||
'help': 'Specify uptime for trains-agent in "<hours> <days>" format. for example, use "09-13 TUE" to set '
|
||||
'Tuesday\'s downtime to 09-13'
|
||||
'Note: Make sure to have only on of uptime/downtime configuration and not both.',
|
||||
'nargs': '*',
|
||||
'default': None,
|
||||
},
|
||||
'--status': {
|
||||
'help': 'Print the worker\'s schedule (uptime properties, server\'s runtime properties and listening queues)',
|
||||
'action': 'store_true',
|
||||
},
|
||||
}, **WORKER_ARGS)
|
||||
|
||||
COMMANDS = {
|
||||
|
||||
@@ -73,9 +73,11 @@ class Session(_Session):
|
||||
os.environ[LOCAL_CONFIG_FILE_OVERRIDE_VAR] = config_file
|
||||
if not Path(config_file).is_file():
|
||||
raise ValueError("Could not open configuration file: {}".format(config_file))
|
||||
|
||||
cpu_only = kwargs.get('cpu_only')
|
||||
if cpu_only:
|
||||
os.environ['CUDA_VISIBLE_DEVICES'] = os.environ['NVIDIA_VISIBLE_DEVICES'] = 'none'
|
||||
|
||||
if kwargs.get('gpus') and not os.environ.get('KUBERNETES_SERVICE_HOST') \
|
||||
and not os.environ.get('KUBERNETES_PORT'):
|
||||
# CUDA_VISIBLE_DEVICES does not support 'all'
|
||||
@@ -84,6 +86,7 @@ class Session(_Session):
|
||||
os.environ['NVIDIA_VISIBLE_DEVICES'] = kwargs.get('gpus')
|
||||
else:
|
||||
os.environ['CUDA_VISIBLE_DEVICES'] = os.environ['NVIDIA_VISIBLE_DEVICES'] = kwargs.get('gpus')
|
||||
|
||||
if kwargs.get('only_load_config'):
|
||||
from trains_agent.backend_api.config import load
|
||||
self.config = load()
|
||||
|
||||
@@ -1 +1 @@
|
||||
__version__ = '0.15.0'
|
||||
__version__ = '0.16.3'
|
||||
|
||||
Reference in New Issue
Block a user