Two had real security consequences: The bootstrap rejection ran on npm dotenv's parser while process.loadEnvFile applied the file with Node's own. Two independently maintained dialects meant the check and the thing it guards could disagree: a name Node accepts but the checker misses would reach process.env unchecked, and BASH_ENV there runs a file of the project's choosing on every `bash -c` the bash tool issues. Parse once with node:util's parseEnv — the same engine loadEnvFile uses — and assign the entries already checked, which also drops the dotenv dependency. llm-pi-ai still returned a literal profile.apiKey ahead of everything, and it registers a settings namespace, so the defect removed from llm-deepseek survived intact in its design twin. The field is gone from the profile schema, the resolution path, and the tests. The rest are consistency and documentation defects the review named: - verify-config-source-ownership did not scan the Python runtime's bundled cordis.yml, which still inlined apiKey and baseURL. Both are covered now, and the line-anchored INLINE_DENY documents that it is a tripwire, not a parser. - The deny list missed NODE_TLS_REJECT_UNAUTHORIZED, the askpass hooks, the GIT_CONFIG_* redirections, and PYTHONHOME — all implied by its own stated rule about what a variable does. - Snapshot lookups folded case on Windows, where environment names are case-insensitive and an exact-match Map could miss a higher-ranked layer. - The credentials note claimed a read-time permission check was "not taken" while this PR implemented it; the credentials-local README still described two layers, live process.env reads, dotenv-era limitations, and a renamed anchor; the llm-deepseek README still advertised the removed literal apiKey; and web.ts and base.cordis.yml kept personal-overlay wording. - The ownership note's literal-apiKey claim now names its scope: the web-search providers keep a literal field but register no settings namespace, so nothing can shadow a stored credential through them.
Packages
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Packages use the @deepseek-ai/dsh-* scope. Each is a Cordis Service subclass or function plugin; contributions use ctx.effect(), ctx.on(), or ctx.waterfall(). Authoring rules: package and root.
Hierarchy
Packages live at packages/<group>/<pkg>/; groups are containers, while names remain @deepseek-ai/dsh-<pkg>. Each group README is the canonical package/ctx-key map.
| Group | Role | Release expectation |
|---|---|---|
core/ |
Product API spine: sessions, prompts, tools, agent services, and the concrete loop | Product — stable surface |
typert/ |
Type graph generation, artifact loading, and runtime registry | Product — stable surface |
goal/ |
Persisted same-session goal state and lifecycle | Product — stable surface |
llm/ |
LLM capability family: the abstract service + provider adapters | Product — stable surface |
subprocess/ |
Subprocess capability family: spawn seam + local process-tree implementation | Product — stable surface |
bash/ |
Bash capability family: executor seam, local impl, model-facing tool | Product — stable surface |
pty/ |
Persistent PTY capability family: owner-scoped sessions, local implementation, and model-facing tools | Product — stable surface |
code-runtime/ |
Code-execution capability family: the runtime seam for model-written programs + a worker-thread backend | Product — stable surface |
sandbox/ |
Process-confinement seam; bwrap/Landlock/Seatbelt backends | Product — stable surface |
fs/ |
Filesystem capability family: seam, local impl, model-facing file tools, bash-backed discovery tools | Product — stable surface |
lsp/ |
LSP capability family: seam, generic stdio provider, and the lsp tool |
Product — stable surface |
skill/ |
Skill capability family: the provider registry, local provider, and model-facing catalog/loader | Product — stable surface |
compact/ |
Compaction capability family: the abstract seam + a basic backend (tool deferred) | Product — stable surface |
context/ |
Model-visible request context, including workspace instructions and time context | Product — stable surface |
subagent/ |
Subagent capability family: the provider-registry seam and the model-facing delegation tool | Product — stable surface |
tasks/ |
Generic background-task runtime and model-facing task_* control tools |
Product — stable surface |
workflow/ |
Workflow capability family: the script-engine seam, worker-thread engine, and model-facing workflow and fresh-agent ralph tools |
Product — stable surface |
web/ |
Web capability family: seam, search/fetch provider impls, and the model-facing web tools | Product — stable surface |
spill/ |
Spill capability family: storage seam, local impl, tool-result spill policy | Product — stable surface |
todo/ |
The model-facing todo_write tool |
Product — stable surface |
plan/ |
Plan collaboration state with a direct entry command and reviewed exit | Product — stable surface |
timeout/ |
Tool-call timeout policy: the tools/execute deadline enforcer |
Product — stable surface |
guard/ |
Loop-hygiene guards: advisory repeat-call reminders | Product — stable surface |
cordis/ |
Cordis runtime integration: self-inspection/model-written temporary Plugins and restricted repository Plugin loading | Product — stable surface |
hooks/ |
Hook bridges + the shared Claude Code / Codex wire-protocol library | Product — stable surface |
session-persistence/ |
Persistence seam + JSONL/SQLite backends | Product — stable surface |
session-projection/ |
Projection seam: domain fold units serve whole values | Product — stable surface |
session-query/ |
Session retrieval family: logical corpus, bounded reads, lineage, event relationships, semantic filtering, and SQLite full-text search | Product — stable surface |
session-title/ |
Log-backed session titles: fallback service and opt-in LLM providers | Product — stable surface |
settings/ |
User-settings seam + file-backed provider | Product — stable surface |
credentials/ |
Credential-reference seam + env-over-.env provider |
Product — stable surface |
telemetry/ |
Session reporting: capture/redact seam, OTel backend | Product — stable surface |
storage/ |
Non-session storage hub + backends + domain form | Product — stable surface |
workspace/ |
Workspace entity | Product — stable surface |
sdk/ |
Project SDK tooling | Product — stable surface |
acp/ |
Automation-only Agent Client Protocol server | Product — stable surface |
ui/ |
JSON-RPC integration, approval/interaction seams, ask-user tool | Product — stable surface |
host/ |
Web-GUI host half: API gateway + HTTP route server | Product — stable surface |
client/ |
Web-GUI browser half: shell, wire, object services, slots, ui-* plugins |
Product — stable surface |
experimental/ |
Prototypes and internal plugins | Unreleased |
examples/ |
Demo bundles (agent-spine + CLI/ACP/JSON-RPC bins) leaves load | Support — example infra |
support/ |
Support infrastructure (testkits, invariants, replay, Loader smokes) | Support — lower compatibility expectations |
util/ |
Low-level zero-dependency utilities shared across groups (Branded<B>, Harness home/path helpers, timeout, retention) |
Support — small, stable, harness-dep-free |
New packages join existing groups; new groups update their README and this table.
Dependencies
The dependency graph is generated: docs/module-graph.md (pnpm run gen-module-graph, freshness-gated in CI).
Extension plugins depend on interfaces, never the concrete loop. dsh-agent-loop is swappable; UI, hook, and tool plugins use dsh-agent. Composition bundles, including dsh-agent-spine-demo, may depend on spine plugins. Capabilities split into interface / implementation / consumer packages; see capability seams.
Package READMEs cover purpose, APIs, extension points, and Model Experience unless on the model-agnostic omission allowlist. They also carry ## Known Limitations and Deferred Work or use its allowlist.