$DSH_HOME/.env carried two incompatible jobs. As credentials-local's writable secret store it could not be hoisted into process.env — hoisting makes every stored key read as a read-only launch override and blocks rotation from the TUI and the web page. But its name and dotenv format promise an environment file, so a DEEPSEEK_BASE_URL sitting beside a working DEEPSEEK_API_KEY in the same file was silently ignored: only the credential provider read the document, and it addresses credential references alone. Split the two jobs into two files. .credentials.yaml is the provider-managed store: a strict YAML mapping of CredentialRef to non-empty string, no version field, no wrapper level. Because it holds credentials and nothing else, a non-mapping root, a non-identifier key, a non-string value, an empty string, a duplicate key, and malformed YAML are all rejections rather than skipped entries — loud at boot and at a write, warn-and-keep-last-good on a live reload. The dotenv physical-line editor gives way to a patch of the parsed document, so comments and untouched entries keep their formatting and any string value round-trips, multi-line included. Writer lock, read-modify-write, atomic 0600 write under a 0700 directory, watcher, self-write suppression, and quiescent disposal are unchanged. $DSH_HOME/.env becomes the user's ordinary environment layer. app-boot's new loadLayeredEnv loads the invoking directory's .env then the Harness home's, giving user < project < inherited; the home resolves from the inherited environment first, so a project .env cannot redirect it. Credential precedence is unchanged: the live environment still wins read-only over the file, and shadowed writes still reject. Whether a provider-managed store should instead win over the environment is a separate decision. No migration: a key already in $DSH_HOME/.env keeps resolving through the new environment layer, as a read-only env source that shadows the stored one.
Packages
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Packages use the @deepseek-ai/dsh-* scope. Each is a Cordis Service subclass or function plugin; contributions use ctx.effect(), ctx.on(), or ctx.waterfall(). Authoring rules: package and root.
Hierarchy
Packages live at packages/<group>/<pkg>/; groups are containers, while names remain @deepseek-ai/dsh-<pkg>. Each group README is the canonical package/ctx-key map.
| Group | Role | Release expectation |
|---|---|---|
core/ |
Product API spine: sessions, prompts, tools, agent services, and the concrete loop | Product — stable surface |
typert/ |
Type graph generation, artifact loading, and runtime registry | Product — stable surface |
goal/ |
Persisted same-session goal state and lifecycle | Product — stable surface |
llm/ |
LLM capability family: the abstract service + provider adapters | Product — stable surface |
subprocess/ |
Subprocess capability family: spawn seam + local process-tree implementation | Product — stable surface |
bash/ |
Bash capability family: executor seam, local impl, model-facing tool | Product — stable surface |
pty/ |
Persistent PTY capability family: owner-scoped sessions, local implementation, and model-facing tools | Product — stable surface |
code-runtime/ |
Code-execution capability family: the runtime seam for model-written programs + a worker-thread backend | Product — stable surface |
sandbox/ |
Process-confinement seam; bwrap/Landlock/Seatbelt backends | Product — stable surface |
fs/ |
Filesystem capability family: seam, local impl, model-facing file tools, bash-backed discovery tools | Product — stable surface |
lsp/ |
LSP capability family: seam, generic stdio provider, and the lsp tool |
Product — stable surface |
skill/ |
Skill capability family: the provider registry, local provider, and model-facing catalog/loader | Product — stable surface |
compact/ |
Compaction capability family: the abstract seam + a basic backend (tool deferred) | Product — stable surface |
context/ |
Model-visible request context, including workspace instructions and time context | Product — stable surface |
subagent/ |
Subagent capability family: the provider-registry seam and the model-facing delegation tool | Product — stable surface |
tasks/ |
Generic background-task runtime and model-facing task_* control tools |
Product — stable surface |
workflow/ |
Workflow capability family: the script-engine seam, worker-thread engine, and model-facing workflow and fresh-agent ralph tools |
Product — stable surface |
web/ |
Web capability family: seam, search/fetch provider impls, and the model-facing web tools | Product — stable surface |
spill/ |
Spill capability family: storage seam, local impl, tool-result spill policy | Product — stable surface |
todo/ |
The model-facing todo_write tool |
Product — stable surface |
plan/ |
Plan collaboration state with a direct entry command and reviewed exit | Product — stable surface |
timeout/ |
Tool-call timeout policy: the tools/execute deadline enforcer |
Product — stable surface |
guard/ |
Loop-hygiene guards: advisory repeat-call reminders | Product — stable surface |
cordis/ |
Cordis runtime integration: self-inspection/model-written temporary Plugins and restricted repository Plugin loading | Product — stable surface |
hooks/ |
Hook bridges + the shared Claude Code / Codex wire-protocol library | Product — stable surface |
session-persistence/ |
Persistence seam + JSONL/SQLite backends | Product — stable surface |
session-projection/ |
Projection seam: domain fold units serve whole values | Product — stable surface |
session-query/ |
Session retrieval family: logical corpus, bounded reads, lineage, event relationships, semantic filtering, and SQLite full-text search | Product — stable surface |
session-title/ |
Log-backed session titles: fallback service and opt-in LLM providers | Product — stable surface |
settings/ |
User-settings seam + file-backed provider | Product — stable surface |
credentials/ |
Credential-reference seam + env-over-.env provider |
Product — stable surface |
telemetry/ |
Session reporting: capture/redact seam, OTel backend | Product — stable surface |
storage/ |
Non-session storage hub + backends + domain form | Product — stable surface |
workspace/ |
Workspace entity | Product — stable surface |
sdk/ |
Project SDK tooling | Product — stable surface |
acp/ |
Automation-only Agent Client Protocol server | Product — stable surface |
ui/ |
TUI and JSON-RPC integrations, approval/interaction seams, ask-user tool | Product — stable surface |
host/ |
Web-GUI host half: API gateway + HTTP route server | Product — stable surface |
client/ |
Web-GUI browser half: shell, wire, object services, slots, ui-* plugins |
Product — stable surface |
experimental/ |
Prototypes and internal plugins | Unreleased |
examples/ |
Demo bundles (agent-spine + TUI/CLI/ACP/JSON-RPC bins) leaves load | Support — example infra |
support/ |
Support infrastructure (testkits, invariants, replay, Loader smokes) | Support — lower compatibility expectations |
util/ |
Low-level zero-dependency utilities shared across groups (Branded<B>, Harness home/path helpers, timeout, retention) |
Support — small, stable, harness-dep-free |
New packages join existing groups; new groups update their README and this table.
Dependencies
The dependency graph is generated: docs/module-graph.md (pnpm run gen-module-graph, freshness-gated in CI).
Extension plugins depend on interfaces, never the concrete loop. dsh-agent-loop is swappable; UI, hook, and tool plugins use dsh-agent. Composition bundles, including dsh-agent-spine-demo, may depend on spine plugins. Capabilities split into interface / implementation / consumer packages; see capability seams.
Package READMEs cover purpose, APIs, extension points, and Model Experience unless on the model-agnostic omission allowlist. They also carry ## Known Limitations and Deferred Work or use its allowlist.