clearml/examples/pipeline/step2_data_processing.py

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import pickle
from trains import Task, StorageManager
from sklearn.model_selection import train_test_split
# Connecting TRAINS
task = Task.init(project_name="examples", task_name="pipeline step 2 process dataset")
# program arguments
# Use either dataset_task_id to point to a tasks artifact or
# use a direct url with dataset_url
args = {
'dataset_task_id': '',
'dataset_url': '',
'random_state': 42,
'test_size': 0.2,
}
# store arguments, later we will be able to change them from outside the code
task.connect(args)
print('Arguments: {}'.format(args))
# only create the task, we will actually execute it later
task.execute_remotely()
# get dataset from task's artifact
if args['dataset_task_id']:
dataset_upload_task = Task.get_task(task_id=args['dataset_task_id'])
print('Input task id={} artifacts {}'.format(args['dataset_task_id'], list(dataset_upload_task.artifacts.keys())))
# download the artifact
iris_pickle = dataset_upload_task.artifacts['dataset'].get_local_copy()
# get the dataset from a direct url
elif args['dataset_url']:
iris_pickle = StorageManager.get_local_copy(remote_url=args['dataset_url'])
else:
raise ValueError("Missing dataset link")
# open the local copy
iris = pickle.load(open(iris_pickle, 'rb'))
# "process" data
X = iris.data
y = iris.target
X_train, X_test, y_train, y_test = train_test_split(
X, y, test_size=args['test_size'], random_state=args['random_state'])
# upload processed data
print('Uploading process dataset')
task.upload_artifact('X_train', X_train)
task.upload_artifact('X_test', X_test)
task.upload_artifact('y_train', y_train)
task.upload_artifact('y_test', y_test)
print('Notice, artifacts are uploaded in the background')
print('Done')