Compare commits

59 Commits

Author SHA1 Message Date
allegroai
da1182a405 Update docs with AWS AMI IDs for v0.13.0 2020-01-06 18:41:09 +02:00
allegroai
53e995ee8c Version bump to v0.13.0 2020-01-06 15:28:31 +02:00
allegroai
4732dc1a88 Remove deprecated env vars from docker compose files 2020-01-06 12:23:06 +02:00
allegroai
e325bcaf67 Hash ROI id to make sure it does not violate Elastic's 512 bytes id limitation 2020-01-05 09:20:38 +02:00
allegroai
a7c30453db Update documentation 2020-01-05 09:19:37 +02:00
allegroai
dedac3b2fe Allow using "$", "." and whitespaces in hyper-parameter keys 2020-01-02 15:28:50 +02:00
allegroai
7d10bbdf8e Update requirement 2020-01-02 15:27:04 +02:00
allegroai
72213dffa4 Update migration to convert user preferences to JSON 2020-01-02 15:26:45 +02:00
allegroai
f778837d4b Change the way user preferences are stored (JSON instead of plain dict) 2020-01-02 15:23:47 +02:00
allegroai
153ed6a7b7 Update documentation 2020-01-02 15:21:35 +02:00
allegroai
5d279c8c5a Add fixed user validation
Fix the way a fixed user id is generated
2020-01-02 15:20:55 +02:00
allegroai
ed910d5f6a Improve server threads shutdown on SIGTERM 2019-12-29 09:04:07 +02:00
allegroai
87d2b6fa15 Add some missing definitions 2019-12-29 09:03:19 +02:00
allegroai
94cfb17291 Add minor updates 2019-12-29 09:02:32 +02:00
allegroai
3f641d37b7 Optimize empty schema validator usage 2019-12-29 08:59:52 +02:00
allegroai
551be12f01 Move mongodb migrations inside the server's folder 2019-12-29 08:58:54 +02:00
allegroai
b536020058 Update documentation 2019-12-29 08:47:47 +02:00
Allegro AI
fb6fbc0a06 Update README.md 2019-12-25 14:21:16 +02:00
allegroai
5ae64fd791 Add support for tasks.clone 2019-12-24 18:01:48 +02:00
allegroai
f9776e4319 Allow two users to have the same full name 2019-12-24 17:58:59 +02:00
allegroai
75e736e7d5 Update readme files 2019-12-24 17:58:02 +02:00
allegroai
1e4756aa1d Add support for atomic add/update of task artifacts 2019-12-24 17:57:26 +02:00
allegroai
52529d3c55 Avoid updating experiment last iteration for metric events related to machine/gpu monitoring 2019-12-21 18:14:13 +02:00
allegroai
53296e8891 Use a single definitive way to obtain server version and build 2019-12-21 18:13:05 +02:00
allegroai
1c87ebc900 Use trains-specific environment variables for server configuration 2019-12-21 18:10:48 +02:00
allegroai
14d9924ea0 Update .gitignore 2019-12-21 18:09:04 +02:00
allegroai
69f9b424c7 Update readme and documentation 2019-12-19 18:27:16 +02:00
allegroai
1a6da301a8 Update internal version string 2019-12-19 18:26:19 +02:00
allegroai
2728b3ed14 Add labels to standalone models 2019-12-14 23:54:24 +02:00
allegroai
38284eef1f Add safe guards 2019-12-14 23:53:09 +02:00
allegroai
9debe1adcd Improve resource monitoring 2019-12-14 23:52:39 +02:00
allegroai
cc93c15f8a Optimize ELK 2019-12-14 23:50:26 +02:00
allegroai
2c3f0e4ba3 Update AWS images 0.12.1 2019-12-14 23:46:21 +02:00
allegroai
c48eb34d8d Add resource monitoring 2019-12-14 23:35:42 +02:00
allegroai
49515e06e1 Optimize thread processing 2019-12-14 23:35:18 +02:00
allegroai
4a1d97c02f typo 2019-12-14 23:34:00 +02:00
allegroai
6c6c1c3f41 Add server resource monitoring 2019-12-14 23:33:36 +02:00
allegroai
0ad687008c Improve server update checks 2019-12-14 23:33:04 +02:00
Allegro AI
fe3dbc92dc Update README.md 2019-11-19 00:14:45 +02:00
Allegro AI
dc53970ff0 Update README.md 2019-11-19 00:01:12 +02:00
Allegro AI
73592b991b Update README.md 2019-11-16 00:10:19 +02:00
Allegro AI
47b981a993 Update README.md 2019-11-16 00:08:36 +02:00
Allegro AI
b500bcab0b Update faq.md 2019-11-16 00:07:30 +02:00
allegroai
59e910db1a Add docker-compose Windows support 2019-11-16 00:04:04 +02:00
allegroai
2ecb430f02 Documentation 2019-11-10 00:23:45 +02:00
Allegro AI
a08722e394 Update README.md 2019-11-10 00:18:16 +02:00
Allegro AI
67c210d9d7 Update README.md 2019-11-10 00:14:30 +02:00
Allegro AI
101ba540f4 Update README.md 2019-11-10 00:08:52 +02:00
Allegro AI
82fc28d477 Update README.md 2019-11-10 00:06:12 +02:00
Allegro AI
7b73f699d2 Update README.md 2019-11-10 00:05:21 +02:00
allegroai
a7e5380f67 Add configuration example, experiments watchdog 2019-11-10 00:03:57 +02:00
allegroai
bcade31786 Add configuration example, limit user login 2019-11-09 23:59:08 +02:00
Allegro AI
6b902f85f4 Update README.md 2019-11-09 23:54:59 +02:00
allegroai
6d4c974045 Documentation 2019-11-09 23:45:12 +02:00
allegroai
2346c6f3f5 Documentation 2019-11-09 23:19:21 +02:00
Allegro AI
82e51b4d36 Update README.md 2019-11-09 23:07:43 +02:00
allegroai
e63599254e Documentation 2019-11-09 21:32:30 +02:00
allegroai
8e7e234161 Add finer control for mongo/elastic/redis host configuration 2019-11-09 21:29:23 +02:00
allegroai
17d94b26c3 Documentation 2019-11-06 12:25:39 +02:00
68 changed files with 2184 additions and 707 deletions

4
.gitignore vendored
View File

@@ -1,11 +1,10 @@
syntax: glob
.idea
apierrors/errors
static/build.json
static/dashboard/node_modules
static/webapp/node_modules
static/webapp/.git
scripts/
generators/
*.pyc
__pycache__
.ropeproject
@@ -20,3 +19,4 @@ build
dist
code.tar.gz
server/schema/services/_cache.json
server/apierrors/errors/*

315
README.md
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@@ -1,4 +1,4 @@
# TRAINS Server
# Trains Server
## Auto-Magical Experiment Manager & Version Control for AI
@@ -9,25 +9,20 @@
## Introduction
The **trains-server** is the backend service infrastructure for [TRAINS](https://github.com/allegroai/trains).
The **trains-server** is the backend service infrastructure for [Trains](https://github.com/allegroai/trains).
It allows multiple users to collaborate and manage their experiments.
By default, TRAINS is set up to work with the TRAINS demo server, which is open to anyone and resets periodically.
In order to host your own server, you will need to install **trains-server** and point TRAINS to it.
By default, **Trains** is set up to work with the **Trains** demo server, which is open to anyone and resets periodically.
In order to host your own server, you will need to launch **trains-server** and point **Trains** to it.
**trains-server** contains the following components:
* The TRAINS Web-App, a single-page UI for experiment management and browsing
* The **Trains** Web-App, a single-page UI for experiment management and browsing
* RESTful API for:
* Documenting and logging experiment information, statistics and results
* Querying experiments history, logs and results
* Locally-hosted file server for storing images and models making them easily accessible using the Web-App
You can quickly setup your **trains-server** using:
- [Docker Installation](#installation)
- Pre-built Amazon [AWS image](#aws)
- [Kubernetes Helm](https://github.com/allegroai/trains-server-helm#trains-server-for-kubernetes-clusters-using-helm)
or manual [Kubernetes installation](https://github.com/allegroai/trains-server-k8s#trains-server-for-kubernetes-clusters)
You can quickly [deploy](#launching-trains-server) your **trains-server** using Docker, AWS EC2 AMI, or Kubernetes.
## System design
@@ -44,155 +39,42 @@ You can quickly setup your **trains-server** using:
- Web application on sub-domain: app.\*.\*
- API service on sub-domain: api.\*.\*
- File storage service on sub-domain: files.\*.\*
## Launching trains-server
## Install / Upgrade - AWS <a name="aws"></a>
### Prerequisites
Use one of our pre-installed Amazon Machine Images for easy deployment in AWS.
The ports 8080/8081/8008 must be available for the **trains-server** services.
For example, to see if port `8080` is in use:
For details and instructions, see [TRAINS-server: AWS pre-installed images](docs/install_aws.md).
* Linux or macOS:
sudo lsof -Pn -i4 | grep :8080 | grep LISTEN
## Docker Installation - Linux, Mac OS X <a name="installation"></a>
* Windows:
Use our pre-built Docker image for easy deployment in Linux and Mac OS X.
For Windows, we recommend installing our pre-built Docker image on a Linux virtual machine.
Latest docker images can be found [here](https://hub.docker.com/r/allegroai/trains).
netstat -an |find /i "8080"
### Launching
Launch **trains-server** in any of the following formats:
1. Setup Docker ([docker-compose Ubuntu](docs/faq.md#ubuntu), [docker-compose OS X](docs/faq.md#mac-osx), [Setup Docker Service Manually](docs/docker_setup.md#setup-docker))
- Pre-built [AWS EC2 AMI](https://github.com/allegroai/trains-server/blob/master/docs/install_aws.md)
- Pre-built Docker Image
- [Linux](https://github.com/allegroai/trains-server/blob/master/docs/install_linux_mac.md)
- [macOS](https://github.com/allegroai/trains-server/blob/master/docs/install_linux_mac.md)
- [Windows 10](https://github.com/allegroai/trains-server/blob/master/docs/install_win.md)
- Kubernetes
- [Kubernetes Helm](https://github.com/allegroai/trains-server-helm#prerequisites)
- Manual [Kubernetes installation](https://github.com/allegroai/trains-server-k8s#prerequisites)
Make sure port 8080/8081/8008 are available for the `trains-server` services
## Connecting Trains to your trains-server
Increase vm.max_map_count for `ElasticSearch` docker
```bash
echo "vm.max_map_count=262144" > /tmp/99-trains.conf
sudo mv /tmp/99-trains.conf /etc/sysctl.d/99-trains.conf
sudo sysctl -w vm.max_map_count=262144
sudo service docker restart
```
1. Create local directories for the databases and storage.
```bash
sudo mkdir -p /opt/trains/data/elastic
sudo mkdir -p /opt/trains/data/mongo/db
sudo mkdir -p /opt/trains/data/mongo/configdb
sudo mkdir -p /opt/trains/data/redis
sudo mkdir -p /opt/trains/logs
sudo mkdir -p /opt/trains/data/fileserver
sudo mkdir -p /opt/trains/config
```
Linux
```bash
$ sudo chown -R 1000:1000 /opt/trains
```
Mac OS X
```bash
$ sudo chown -R $(whoami):staff /opt/trains
```
1. Clone the [trains-server](https://github.com/allegroai/trains-server) repository and change directories to the new **trains-server** directory.
```bash
$ git clone https://github.com/allegroai/trains-server.git
$ cd trains-server
```
1. Launch the Docker containers <a name="launch-docker"></a>
* Automatically with docker-compose (details: [Linux/Ubuntu](docs/faq.md#ubuntu), [OS X](docs/faq.md#mac-osx))
```bash
$ docker-compose up
```
* Manually, see [Launching Docker Containers Manually](docs/docker_setup.md#launch) for instructions.
1. Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
* Web server on port `8080`
* API server on port `8008`
* File server on port `8081`
## Optional Configuration
The **trains-server** default configuration can be easily overridden using external configuration files. By default, the server will look for these files in `/opt/trains/config`.
In order to apply the new configuration, you must restart the server (see [Restarting trains-server](#restart-server)).
### Adding Web Login Authentication
By default anyone can login to the **trains-server** Web-App.
You can configure the **trains-server** to allow only a specific set of users to access the system.
Enable this feature by placing `apiserver.conf` file under `/opt/trains/config`.
Sample fixed user configuration file `/opt/trains/config/apiserver.conf`:
auth {
# Fixed users login credetials
# No other user will be able to login
fixed_users {
enabled: true
users: [
{
username: "jane"
password: "12345678"
name: "Jane Doe"
},
{
username: "john"
password: "12345678"
name: "John Doe"
},
]
}
}
To apply the `apiserver.conf` changes, you must restart the *trains-apiserver* (docker) (see [Restarting trains-server](#restart-server)).
### Configuring the Non-Responsive Experiments Watchdog
The non-responsive experiment watchdog, monitors experiments that were not updated for a given period of time,
and marks them as `aborted`. The watchdog is always active with a default of 7200 seconds (2 hours) of inactivity threshold.
To change the watchdog's timeouts, place a `services.conf` file under `/opt/trains/config`.
Sample watchdog configuration file `/opt/trains/config/services.conf`:
tasks {
non_responsive_tasks_watchdog {
# In-progress tasks that haven't been updated for at least 'value' seconds will be stopped by the watchdog
threshold_sec: 7200
# Watchdog will sleep for this number of seconds after each cycle
watch_interval_sec: 900
}
}
To apply the `services.conf` changes, you must restart the *trains-apiserver* (docker) (see [Restarting trains-server](#restart-server)).
### Restarting trains-server <a name="restart-server"></a>
To restart the **trains-server**, you must first stop and remove the containers, and then restart.
1. Restarting docker-compose containers.
$ docker-compose down
$ docker-compose up
1. Manually restarting dockers [instructions](docs/docker_setup.md#launch).
## Configuring **TRAINS** client
Once you have installed the **trains-server**, make sure to configure **TRAINS** [client](https://github.com/allegroai/trains)
to use your locally installed server (and not the demo server).
- Run the `trains-init` command for an interactive setup
- Or manually edit `~/trains.conf` file, making sure the `api_server` value is configured correctly, for example:
By default, the **Trains** client is set up to work with the [**Trains** demo server](https://demoapp.trains.allegro.ai/).
To have the **Trains** client use your **trains-server** instead:
- Run the `trains-init` command for an interactive setup.
- Or manually edit `~/trains.conf` file, making sure the server settings (`api_server`, `web_server`, `file_server`) are configured correctly, for example:
api {
# API server on port 8008
@@ -205,93 +87,80 @@ to use your locally installed server (and not the demo server).
files_server: "http://localhost:8081"
}
* Notice that if you setup **trains-server** in a sub-domain configuration, there is no need to specify a port number,
**Note**: If you have set up **trains-server** in a sub-domain configuration, then there is no need to specify a port number,
it will be inferred from the http/s scheme.
See [Installing and Configuring TRAINS](https://github.com/allegroai/trains#configuration) for more details.
After launching the **trains-server** and configuring the **Trains** client to use the **trains-server**,
you can [use](https://github.com/allegroai/trains#using-trains) **Trains** in your experiments and view them in your **trains-server** web server,
for example http://localhost:8080.
For more information about the Trains client, see [**Trains**](https://github.com/allegroai/trains).
## What next?
## Advanced Functionality
Now that the **trains-server** is installed, and TRAINS is configured to use it,
you can [use](https://github.com/allegroai/trains#using-trains) TRAINS in your experiments and view them in the web server,
for example http://localhost:8080
**trains-server** provides a few additional useful features, which can be manually enabled:
* [Web login authentication](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#web-auth)
* [Non-responsive experiments watchdog](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#watchdog-the-non-responsive-task-watchdog-settings)
## Restarting trains-server
To restart the **trains-server**, you must first stop the containers, and then restart them.
```bash
docker-compose down
docker-compose -f docker-compose.yml up
```
## Upgrading <a name="upgrade"></a>
We are constantly updating, improving and adding to the **trains-server**.
New releases will include new pre-built Docker images.
When we release a new version and include a new pre-built Docker image for it, upgrade as follows:
**trains-server** releases are also reflected in the [docker compose configuration file](https://github.com/allegroai/trains-server/blob/master/docker-compose.yml).
We strongly encourage you to keep your **trains-server** up to date, by keeping up with the current release.
* Upgrading your docker-compose installation
**Note**: The following upgrade instructions use the Linux OS as an example.
* Shut down the docker containers
```bash
$ docker-compose down
```
* We highly recommend backing up your data directory before upgrading
(see **Step ii** in the Manual Docker upgrade)
To upgrade your existing **trains-server** deployment:
* Spin up the docker containers, it will automatically pull the latest trains-server build
```bash
$ docker-compose up
```
1. Shut down the docker containers
```bash
docker-compose down
```
* In case of a docker error: "... The container name "/trains-???" is already in use by ..."
Try removing deprecated images with:
```bash
$ docker rm -f $(docker ps -a -q)
```
1. We highly recommend backing up your data directory before upgrading.
* Manual Docker upgrade
1. Shut down and remove each of your Docker instances using the following commands:
```bash
$ sudo docker stop <docker-name>
$ sudo docker rm -v <docker-name>
```
The Docker names are (see [Launching Docker Containers](#launch-docker)):
* `trains-elastic`
* `trains-mongo`
* `trains-redis`
* `trains-fileserver`
* `trains-apiserver`
* `trains-webserver`
2. We highly recommend backing up your data directory!. A simple way to do that is using `tar`:
For example, if your data directory is `/opt/trains`, use the following command:
```bash
$ sudo tar czvf ~/trains_backup.tgz /opt/trains/data
```
This backups all data to an archive in your home directory.
To restore this example backup, use the following command:
```bash
$ sudo rm -R /opt/trains/data
$ sudo tar -xzf ~/trains_backup.tgz -C /opt/trains/data
```
3. Pull the new **trains-server** docker image using the following command:
```bash
$ sudo docker pull allegroai/trains:latest
```
If you wish to pull a different version, replace `latest` with the required version number, for example:
```bash
$ sudo docker pull allegroai/trains:0.11.0
```
4. Launch the newly released Docker image (see [Launching Docker Containers](#launch-docker)).
Assuming your data directory is `/opt/trains`, to archive all data into `~/trains_backup.tgz` execute:
```bash
sudo tar czvf ~/trains_backup.tgz /opt/trains/data
```
<details>
<summary>Restore instructions:</summary>
To restore this example backup, execute:
```bash
sudo rm -R /opt/trains/data
sudo tar -xzf ~/trains_backup.tgz -C /opt/trains/data
```
</details>
1. Download the latest `docker-compose.yml` file.
```bash
curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml -o docker-compose.yml
```
1. Spin up the docker containers, it will automatically pull the latest **trains-server** build
```bash
docker-compose -f docker-compose.yml pull
docker-compose -f docker-compose.yml up
```
**\* If something went wrong along the way, check our FAQ: [Common Docker Upgrade Errors](https://github.com/allegroai/trains-server/blob/master/docs/faq.md#common-docker-upgrade-errors).**
## Community & Support
If you have any questions, look to the TRAINS-server [FAQ](https://github.com/allegroai/trains-server/blob/master/docs/faq.md), or
If you have any questions, look to the Trains server [FAQ](https://github.com/allegroai/trains-server/blob/master/docs/faq.md), or
tag your questions on [stackoverflow](https://stackoverflow.com/questions/tagged/trains) with '**trains**' tag.
For feature requests or bug reports, please use [GitHub issues](https://github.com/allegroai/trains-server/issues).

View File

@@ -20,9 +20,12 @@ services:
- mongo
- elasticsearch
environment:
ELASTIC_SERVICE_HOST: elasticsearch
MONGODB_SERVICE_HOST: mongo
REDIS_SERVICE_HOST: redis
TRAINS_ELASTIC_SERVICE_HOST: elasticsearch
TRAINS_ELASTIC_SERVICE_PORT: 9200
TRAINS_MONGODB_SERVICE_HOST: mongo
TRAINS_MONGODB_SERVICE_PORT: 27017
TRAINS_REDIS_SERVICE_HOST: redis
TRAINS_REDIS_SERVICE_PORT: 6379
networks:
- backend
elasticsearch:

120
docker-compose-win10.yml Normal file
View File

@@ -0,0 +1,120 @@
version: "3.6"
services:
apiserver:
command:
- apiserver
container_name: trains-apiserver
image: allegroai/trains:latest
restart: unless-stopped
volumes:
- c:/opt/trains/logs:/var/log/trains
- c:/opt/trains/config:/opt/trains/config
depends_on:
- redis
- mongo
- elasticsearch
- fileserver
environment:
TRAINS_ELASTIC_SERVICE_HOST: elasticsearch
TRAINS_ELASTIC_SERVICE_PORT: 9200
TRAINS_MONGODB_SERVICE_HOST: mongo
TRAINS_MONGODB_SERVICE_PORT: 27017
TRAINS_REDIS_SERVICE_HOST: redis
TRAINS_REDIS_SERVICE_PORT: 6379
ports:
- "8008:8008"
networks:
- backend
elasticsearch:
networks:
- backend
container_name: trains-elastic
environment:
ES_JAVA_OPTS: -Xms2g -Xmx2g
bootstrap.memory_lock: "true"
cluster.name: trains
cluster.routing.allocation.node_initial_primaries_recoveries: "500"
discovery.zen.minimum_master_nodes: "1"
http.compression_level: "7"
node.ingest: "true"
node.name: trains
reindex.remote.whitelist: '*.*'
script.inline: "true"
script.painless.regex.enabled: "true"
script.update: "true"
thread_pool.bulk.queue_size: "2000"
thread_pool.search.queue_size: "10000"
xpack.monitoring.enabled: "false"
xpack.security.enabled: "false"
ulimits:
memlock:
soft: -1
hard: -1
nofile:
soft: 65536
hard: 65536
image: docker.elastic.co/elasticsearch/elasticsearch:5.6.16
restart: unless-stopped
volumes:
- c:/opt/trains/data/elastic:/usr/share/elasticsearch/data
ports:
- "9200:9200"
fileserver:
networks:
- backend
command:
- fileserver
container_name: trains-fileserver
image: allegroai/trains:latest
restart: unless-stopped
volumes:
- c:/opt/trains/logs:/var/log/trains
- c:/opt/trains/data/fileserver:/mnt/fileserver
ports:
- "8081:8081"
mongo:
networks:
- backend
container_name: trains-mongo
image: mongo:3.6.5
restart: unless-stopped
command: --setParameter internalQueryExecMaxBlockingSortBytes=196100200
volumes:
- mongodata:/data
ports:
- "27017:27017"
redis:
networks:
- backend
container_name: trains-redis
image: redis:5.0
restart: unless-stopped
volumes:
- c:/opt/trains/data/redis:/data
ports:
- "6379:6379"
webserver:
command:
- webserver
container_name: trains-webserver
image: allegroai/trains:latest
restart: unless-stopped
volumes:
- c:/trains/logs:/var/log/trains
depends_on:
- apiserver
ports:
- "8080:80"
networks:
backend:
driver: bridge
volumes:
mongodata:

View File

@@ -16,9 +16,12 @@ services:
- elasticsearch
- fileserver
environment:
ELASTIC_SERVICE_HOST: elasticsearch
MONGODB_SERVICE_HOST: mongo
REDIS_SERVICE_HOST: redis
TRAINS_ELASTIC_SERVICE_HOST: elasticsearch
TRAINS_ELASTIC_SERVICE_PORT: 9200
TRAINS_MONGODB_SERVICE_HOST: mongo
TRAINS_MONGODB_SERVICE_PORT: 27017
TRAINS_REDIS_SERVICE_HOST: redis
TRAINS_REDIS_SERVICE_PORT: 6379
ports:
- "8008:8008"
networks:

19
docs/apiserver.conf Normal file
View File

@@ -0,0 +1,19 @@
auth {
# Fixed users login credentials
# No other user will be able to login
fixed_users {
enabled: true
users: [
{
username: "jane"
password: "12345678"
name: "Jane Doe"
},
{
username: "john"
password: "12345678"
name: "John Doe"
},
]
}
}

View File

@@ -1,106 +0,0 @@
# TRAINS-server: Using Docker Pre-Built Images
The pre-built Docker image for the **trains-server** is the quickest way to get started with your own **TRAINS** server.
You can also build the entire **trains-server** architecture using the code available in the [trains-server](https://github.com/allegroai/trains-server) repository.
**Note**: We tested this pre-built Docker image with Linux, only. For Windows users, we recommend installing the pre-built image on a Linux virtual machine.
## Prerequisites
* You must be logged in as a user with sudo privileges
* Use `bash` for all command-line instructions in this installation
## Setup Docker
### Step 1: Install Docker CE
You must first install Docker. For instructions about installing Docker, see [Supported platforms](https://docs.docker.com/install//#support) in the Docker documentation.
For example, to [install in Ubuntu](https://docs.docker.com/install/linux/docker-ce/ubuntu/) / Mint (x86_64/amd64):
```bash
sudo apt-get install -y apt-transport-https ca-certificates curl software-properties-common
curl -fsSL https://download.docker.com/linux/ubuntu/gpg | sudo apt-key add -
. /etc/os-release
sudo add-apt-repository "deb [arch=amd64] https://download.docker.com/linux/ubuntu $UBUNTU_CODENAME stable"
sudo apt-get update
sudo apt-get install -y docker-ce
```
### Step 2: Set the Maximum Number of Memory Map Areas
Elastic requires that the `vm.max_map_count` kernel setting, which is the maximum number of memory map areas a process can use, is set to at least 262144.
For CentOS 7, Ubuntu 16.04, Mint 18.3, Ubuntu 18.04 and Mint 19.x, we tested the following commands to set `vm.max_map_count`:
```bash
echo "vm.max_map_count=262144" > /tmp/99-trains.conf
sudo mv /tmp/99-trains.conf /etc/sysctl.d/99-trains.conf
sudo sysctl -w vm.max_map_count=262144
```
For information about setting this parameter on other systems, see the [elastic](https://www.elastic.co/guide/en/elasticsearch/reference/current/docker.html#docker-cli-run-prod-mode) documentation.
### Step 3: Restart the Docker daemon
Restart the Docker daemon.
```bash
sudo service docker restart
```
### Step 4: Choose a Data Directory
Choose a directory on your system in which all data maintained by the **trains-server** is stored.
Create this directory, and set its owner and group to `uid` 1000. The data stored in this directory includes the database, uploaded files and logs.
For example, if your data directory is `/opt/trains`, then use the following command:
```bash
sudo mkdir -p /opt/trains/data/elastic
sudo mkdir -p /opt/trains/data/mongo/db
sudo mkdir -p /opt/trains/data/mongo/configdb
sudo mkdir -p /opt/trains/data/redis
sudo mkdir -p /opt/trains/logs
sudo mkdir -p /opt/trains/data/fileserver
sudo mkdir -p /opt/trains/config
sudo chown -R 1000:1000 /opt/trains
```
## TRAINS-server: Manually Launching Docker Containers <a name="launch"></a>
You can manually launch the Docker containers using the following commands.
If your data directory is not `/opt/trains`, then in the five `docker run` commands below, you must replace all occurrences of `/opt/trains` with your data directory path.
1. Launch the **trains-elastic** Docker container.
sudo docker run -d --restart="always" --name="trains-elastic" -e "bootstrap.memory_lock=true" --ulimit memlock=-1:-1 -e "ES_JAVA_OPTS=-Xms2g -Xmx2g" -e "bootstrap.memory_lock=true" -e "cluster.name=trains" -e "discovery.zen.minimum_master_nodes=1" -e "node.name=trains" -e "script.inline=true" -e "script.update=true" -e "thread_pool.bulk.queue_size=2000" -e "thread_pool.search.queue_size=10000" -e "xpack.security.enabled=false" -e "xpack.monitoring.enabled=false" -e "cluster.routing.allocation.node_initial_primaries_recoveries=500" -e "node.ingest=true" -e "http.compression_level=7" -e "reindex.remote.whitelist=*.*" -e "script.painless.regex.enabled=true" --network="host" -v /opt/trains/data/elastic:/usr/share/elasticsearch/data docker.elastic.co/elasticsearch/elasticsearch:5.6.16
1. Launch the **trains-mongo** Docker container.
sudo docker run -d --restart="always" --name="trains-mongo" -v /opt/trains/data/mongo/db:/data/db -v /opt/trains/data/mongo/configdb:/data/configdb --network="host" mongo:3.6.5
1. Launch the **trains-redis** Docker container.
sudo docker run -d --restart="always" --name="trains-redis" -v /opt/trains/data/redis:/data --network="host" redis:5.0
1. Launch the **trains-fileserver** Docker container.
sudo docker run -d --restart="always" --name="trains-fileserver" --network="host" -v /opt/trains/logs:/var/log/trains -v /opt/trains/data/fileserver:/mnt/fileserver allegroai/trains:latest fileserver
1. Launch the **trains-apiserver** Docker container.
sudo docker run -d --restart="always" --name="trains-apiserver" --network="host" -v /opt/trains/logs:/var/log/trains -v /opt/trains/config:/opt/trains/config allegroai/trains:latest apiserver
1. Launch the **trains-webserver** Docker container.
sudo docker run -d --restart="always" --name="trains-webserver" -p 8080:80 allegroai/trains:latest webserver
1. Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
* API server on port `8008`
* Web server on port `8080`
* File server on port `8081`

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@@ -1,66 +1,42 @@
# TRAINS-server FAQ
# trains-server FAQ
* [Deploying trains-server on Kubernetes clusters](#kubernetes)
Launching **trains-server**
* [Creating a Helm Chart for trains-server Kubernetes deployment](#helm)
* How do I launch **trains-server** on:
* [Running trains-server on Mac OS X](#mac-osx)
* [Stand alone Linux Ubuntu systems?](#ubuntu)
* [macOS?](#mac-osx)
* [Windows 10?](#docker_compose_win10)
* [Installing trains-server on stand alone Linux Ubuntu systems ](#ubuntu)
* [How do I restart trains-server?](#restart)
* [Resolving port conflicts preventing fixed users mode authentication and login](#port-conflict)
Kubernetes
* [Configuring trains-server for sub-domains and load balancers](#sub-domains)
* [Can I deploy trains-server on Kubernetes clusters?](#kubernetes)
### Deploying trains-server on Kubernetes clusters <a name="kubernetes"></a>
* [Can I create a Helm Chart for trains-server Kubernetes deployment?](#helm)
**trains-server** supports Kubernetes. See [trains-server-k8s](https://github.com/allegroai/trains-server-k8s)
which contains the YAML files describing the required services and detailed instructions for deploying
**trains-server** to a Kubernetes clusters.
Configuration
### Creating a Helm Chart for trains-server Kubernetes deployment <a name="helm"></a>
* [How do I configure trains-server for sub-domains and load balancers?](#sub-domains)
**trains-server** supports creating a Helm chart for Kubernetes deployment. See [trains-server-helm](https://github.com/allegroai/trains-server-helm)
which you can use to create a Helm chart for **trains-server** and contains detailed instructions for deploying
**trains-server** to a Kubernetes clusters using Helm.
* [Can I add web login authentication to trains-server?](#web-auth)
### Running trains-server on Mac OS X <a name="mac-osx"></a>
* [Can I modify the non-responsive experiment watchdog settings?](#watchdog)
To install and configure **trains-server** on Mac OS X, follow the steps below.
Troubleshooting
1. Install [docker for OS X](https://docs.docker.com/docker-for-mac/install/).
* [How do I fix Docker upgrade errors?](#common-docker-upgrade-errors)
1. Configure [Docker](https://www.elastic.co/guide/en/elasticsearch/reference/current/docker.html#docker-cli-run-prod-mode).
* [Why is web login authentication not working?](#port-conflict)
$ screen ~/Library/Containers/com.docker.docker/Data/vms/0/tty
sysctl -w vm.max_map_count=262144
## Launching **trains-server**
1. Create local directories for the databases and storage.
### How do I launch trains-server on stand alone Linux Ubuntu systems? <a name="ubuntu"></a>
$ sudo mkdir -p /opt/trains/data/elastic
$ sudo mkdir -p /opt/trains/data/mongo/db
$ sudo mkdir -p /opt/trains/data/mongo/configdb
$ sudo mkdir -p /opt/trains/logs
$ sudo mkdir -p /opt/trains/config
$ sudo mkdir -p /opt/trains/data/fileserver
$ sudo chown -R $(whoami):staff /opt/trains
1. Open the Docker app, select **Preferences**, and then on the **File Sharing** tab, add `/opt/trains`.
1. Clone the [trains-server](https://github.com/allegroai/trains-server) repository and change directories to the new **trains-server** directory.
$ git clone https://github.com/allegroai/trains-server.git
$ cd trains-server
1. Run `docker-compose` with the unified docker image.
$ docker-compose -f docker-compose-unified.yml up
Your server is now running on [http://localhost:8080](http://localhost:8080)
### Installing trains-server on stand alone Linux Ubuntu systems <a name="ubuntu"></a>
To install **trains-server** on a stand alone Linux Ubuntu, follow the steps belows.
To launch **trains-server** on a stand alone Linux Ubuntu:
1. Install [docker for Ubuntu](https://docs.docker.com/install/linux/docker-ce/ubuntu/).
@@ -71,81 +47,127 @@ To install **trains-server** on a stand alone Linux Ubuntu, follow the steps bel
1. Remove the previous installation of **trains-server**.
**WARNING**: This clears all existing **TRAINS** databases.
**WARNING**: This clears all existing **Trains** databases.
$ sudo rm -R /opt/trains/
sudo rm -R /opt/trains/
1. Create local directories for the databases and storage.
$ sudo mkdir -p /opt/trains/data/elastic
$ sudo mkdir -p /opt/trains/data/mongo/db
$ sudo mkdir -p /opt/trains/data/mongo/configdb
$ sudo mkdir -p /opt/trains/logs
$ sudo mkdir -p /opt/trains/config
$ sudo mkdir -p /opt/trains/data/fileserver
$ sudo chown -R 1000:1000 /opt/trains
sudo mkdir -p /opt/trains/data/elastic
sudo mkdir -p /opt/trains/data/mongo/db
sudo mkdir -p /opt/trains/data/mongo/configdb
sudo mkdir -p /opt/trains/logs
sudo mkdir -p /opt/trains/config
sudo mkdir -p /opt/trains/data/fileserver
sudo chown -R 1000:1000 /opt/trains
1. Clone the [trains-server](https://github.com/allegroai/trains-server) repository and change directories to the new **trains-server** directory.
$ git clone https://github.com/allegroai/trains-server.git
$ cd trains-server
git clone https://github.com/allegroai/trains-server.git
cd trains-server
1. Run `docker-compose`
$ /usr/local/bin/docker-compose -f docker-compose.yml up
/usr/local/bin/docker-compose -f docker-compose.yml up
Your server is now running on [http://localhost:8080](http://localhost:8080)
### How do I launch trains-server on macOS? <a name="mac-osx"></a>
To launch **trains-server** on macOS:
1. Install [docker for macOS](https://docs.docker.com/docker-for-mac/install/).
1. Configure [Docker](https://www.elastic.co/guide/en/elasticsearch/reference/current/docker.html#docker-cli-run-prod-mode).
screen ~/Library/Containers/com.docker.docker/Data/vms/0/tty
sysctl -w vm.max_map_count=262144
1. Create local directories for the databases and storage.
sudo mkdir -p /opt/trains/data/elastic
sudo mkdir -p /opt/trains/data/mongo/db
sudo mkdir -p /opt/trains/data/mongo/configdb
sudo mkdir -p /opt/trains/data/redis
sudo mkdir -p /opt/trains/logs
sudo mkdir -p /opt/trains/config
sudo mkdir -p /opt/trains/data/fileserver
sudo chown -R $(whoami):staff /opt/trains
1. Open the Docker app, select **Preferences**, and then on the **File Sharing** tab, add `/opt/trains`.
1. Clone the [trains-server](https://github.com/allegroai/trains-server) repository and change directories to the new **trains-server** directory.
git clone https://github.com/allegroai/trains-server.git
cd trains-server
1. Run `docker-compose` with the docker compose file.
docker-compose -f docker-compose.yml up
Your server is now running on [http://localhost:8080](http://localhost:8080)
### Resolving port conflicts preventing fixed users mode authentication and login <a name="port-conflict"></a>
### How do I launch trains-server on Windows 10? <a name="docker_compose_win10"></a>
A port conflict may occur between the **trains-server** MongoDB and Elastic instances and other
instances running on your system. **trains-server** uses the following default ports which may be in conflict with other instances:
You can run **trains-server** on Windows 10 using Docker Desktop for Windows (see the Docker [System Requirements](https://docs.docker.com/docker-for-windows/install/#system-requirements)).
* MongoDB port `27017`
* Elastic port `9200`
To launch **trains-server** on Windows 10:
You can check for port conflicts in the logs in `/opt/trains/log`.
1. Install the Docker Desktop for Windows application by either:
If a port conflict occurs, first change the port in your **trains-server** `/opt/trains/server/config/default/hosts.conf` file to the new port and then
run the `docker run` command with the `port` option specifying the new port to restart the **trains-server** instance.
* following the [Install Docker Desktop on Windows](https://docs.docker.com/docker-for-windows/install/) instructions.
* running the Docker installation [wizard](https://hub.docker.com/?overlay=onboarding).
For example, to resolve a MongoDB port conflict change port `27017` to `27018`:
1. Increase the memory allocation in Docker Desktop to `4GB`.
1. Modify `/opt/trains/server/config/default/hosts.conf` changing the ports in the `mongo` section:
1. In your Windows notification area (system tray), right click the Docker icon.
1. Click *Settings*, *Advanced*, and then set the memory to at least `4096`.
1. Click *Apply*.
elastic {
events {
hosts: [{host: "127.0.0.1", port: 9200}]
args {
timeout: 60
dead_timeout: 10
max_retries: 5
retry_on_timeout: true
}
index_version: "1"
}
}
1. Create local directories for data and logs. Open PowerShell and execute the following commands:
mongo {
backend {
host: "mongodb://127.0.0.1:27018/backend"
}
auth {
host: "mongodb://127.0.0.1:27018/auth"
}
}
cd c:
mkdir c:\opt\trains\data
mkdir c:\opt\trains\logs
2. Start the **trains-server** MongoDB container using `--port 27018`.
1. Download the **trains-server** docker-compose YAML file [docker-compose-win10.yml](https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose-win10.yml) as `c:\opt\trains\docker-compose.yml`.
sudo docker run -d --restart="always" --name="trains-mongo" -v /opt/trains/data/mongo/db:/data/db -v /opt/trains/data/mongo/configdb:/data/configdb --network="host" mongo:3.6.5 mongod --port 27018
1. Run `docker-compose`. In PowerShell, execute the following commands:
In a future version of **trains-server**, to start the API server, environment variables will be available to use instead of modifying the configuration file (instead of Step 1 above).
The environment variables will be available to set different ports for both MongoDB and Elastic instances:
docker-compose -f up docker-compose-win10.yml
* `MONGODB_SERVICE_PORT` (e.g., `MONGODB_SERVICE_PORT=27018`)
* `ELASTIC_SERVICE_POST` (e.g., `ELASTIC_SERVICE_POST=9201`)
Your server is now running on [http://localhost:8080](http://localhost:8080)
### Configuring trains-server for sub-domains and load balancers <a name="sub-domains"></a>
### How do I restart trains-server? <a name="restart"></a>
Restart *trains-server* by first stopping the Docker containers and then restarting them.
```bash
docker-compose down
docker-compose up -f docker-compose.yml
```
**Note**: If you are using a different docker-compose YAML file, specify that file.
## Kubernetes
### Can I deploy trains-server on Kubernetes clusters? <a name="kubernetes"></a>
**trains-server** supports Kubernetes. See [trains-server-k8s](https://github.com/allegroai/trains-server-k8s)
which contains the YAML files describing the required services and detailed instructions for deploying
**trains-server** to a Kubernetes clusters.
### Can I create a Helm Chart for trains-server Kubernetes deployment? <a name="helm"></a>
**trains-server** supports creating a Helm chart for Kubernetes deployment. See [trains-server-helm](https://github.com/allegroai/trains-server-helm)
which you can use to create a Helm chart for **trains-server** and contains detailed instructions for deploying
**trains-server** to a Kubernetes clusters using Helm.
## Configuration
### How do I configure trains-server for sub-domains and load balancers? <a name="sub-domains"></a>
You can configure **trains-server** for sub-domains and a load balancer.
@@ -181,3 +203,126 @@ For example, if your domain is `trains.mydomain.com` and your sub-domains are `a
1. Run the Docker containers with our updated `docker run` commands (see [Launching Docker Containers](#https://github.com/allegroai/trains-server#launching-docker-containers)).
### Can I add web login authentication to trains-server? <a name="web-auth"></a>
By default, anyone can login to the **trains-server** Web-App.
You can configure the **trains-server** to allow only a specific set of users to access the system.
To add web login authentication to **trains-server**:
1. If you are not using the current **trains-server** version, then [upgrade](https://github.com/allegroai/trains-server#upgrade).
1. In `/opt/trains/config/apiserver.conf`, add the `auth` section and in it specify the users, for example:
**Note**: A sample `apiserver.conf` configuration file is also available [here](https://github.com/allegroai/trains-server/blob/master/docs/apiserver.conf).
auth {
# Fixed users login credentials
# No other user will be able to login
fixed_users {
enabled: true
users: [
{
username: "jane"
password: "12345678"
name: "Jane Doe"
},
{
username: "john"
password: "12345678"
name: "John Doe"
},
]
}
}
1. Restart **trains-server** (see the [Restarting trains-server](#restart) FAQ).
### Can I modify the experiment watchdog settings? <a name="watchdog"></a>
The non-responsive experiment watchdog monitors experiments that were not updated for a specified period of time
and marks them as `aborted`. The watchdog is always active.
You can modify the following settings for the watchdog:
* the time threshold (in seconds) of experiment inactivity (default value is 7200 seconds (2 hours))
* the time interval (in seconds) between watchdog cycles
To change the watchdog's settings:
1. In `/opt/trains/config`, add the `services.conf` file and in it specify the watchdog settings, for example:
**Note**: A sample watchdog `services.conf` configuration file is also available [here](https://github.com/allegroai/trains-server/blob/master/docs/services.conf).
tasks {
non_responsive_tasks_watchdog {
# In-progress tasks that haven't been updated for at least 'value' seconds will be stopped by the watchdog
threshold_sec: 7200
# Watchdog will sleep for this number of seconds after each cycle
watch_interval_sec: 900
}
}
1. Restart **trains-server** (see the [Restarting trains-server](#restart) FAQ).
## Troubleshooting
### How do I fix Docker upgrade errors? <a name="common-docker-upgrade-errors"></a>
To resolve the Docker error "... The container name "/trains-???" is already in use by ...", try removing deprecated images:
docker rm -f $(docker ps -a -q)
### Why is web login authentication not working?
A port conflict between the **trains-server** MongoDB and / or Elastic instances, and other
instances running on your system may prevent web login authentication
from working correctly.
**trains-server** uses the following default ports which may be in conflict with other instances:
* MongoDB port `27017`
* Elastic port `9200`
You can check for port conflicts in the logs in `/opt/trains/log`.
If a port conflict occurs, change the MongoDB and / or Elastic ports in the `docker-compose.yml`,
and then run the Docker compose commands to restart the **trains-server** instance.
To change the MongoDB and / or Elastic ports for **trains-server**:
1. Edit the `docker-compose.yml` file.
1. In the `services/trainsserver/environment` section, add the following environment variable(s):
* For MongoDB:
MONGODB_SERVICE_PORT: <new-mongodb-port>
* For Elastic:
ELASTIC_SERVICE_PORT: <new-elasticsearch-port>
For example:
MONGODB_SERVICE_PORT: 27018
ELASTIC_SERVICE_PORT: 9201
1. For MongoDB, in the `services/mongo/ports` section, expose the new MongoDB port:
<new-mongodb-port>:27017
For example:
20718:27017
1. For Elastic, in the `services/elasticsearch/ports` section, expose the new Elastic port:
<new-elsticsearch-port>:9200
For example:
9201:9200
2. Restart **trains-server** (see the [Restarting trains-server](#restart) FAQ).

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@@ -1,32 +1,36 @@
# **TRAINS-server**: AWS pre-installed images
# Deploying **trains-server** on AWS
In order to easily deploy **trains-server** on AWS, we created the following Amazon Machine Images (AMIs).
To easily deploy **trains-server** on AWS, use one of our pre-built Amazon Machine Images (AMIs).
We provide AMIs per region for each released version of **trains-server**, see [Released versions](#released-versions) below.
Service port numbers on these AMIs are:
- Web: 8080
- API: 8008
- File Server: 8081
Once the AMI is up and running, [configure the Trains client](https://github.com/allegroai/trains/blob/master/README.md#configuration) to use your **trains-server**.
The service port numbers on our **trains-server** AMIs:
Persistent storage configuration:
- MongoDB: /opt/trains/data/mongo/
- ElasticSearch: /opt/trains/data/elastic/
- File Server: /mnt/fileserver/
- Web application: `8080`
- API Server: `8008`
- File Server: `8081`
Instructions on launching a custom AMI from the EC2 console can be found [here](https://aws.amazon.com/premiumsupport/knowledge-center/launch-instance-custom-ami/)
and a detailed version [here](https://docs.aws.amazon.com/AWSEC2/latest/UserGuide/launching-instance.html).
The persistent storage configuration:
The minimum recommended instance type is **t3a.large**
- MongoDB: `/opt/trains/data/mongo/`
- ElasticSearch: `/opt/trains/data/elastic/`
- File Server: `/mnt/fileserver/`
For examples and use cases, check the [Trains usage examples](https://github.com/allegroai/trains/blob/master/docs/trains_examples.md).
For instructions on launching a custom AMI from the EC2 console, see the [AWS Knowledge Center](https://aws.amazon.com/premiumsupport/knowledge-center/launch-instance-custom-ami/) or detailed instructions in the [AWS Documentation](https://docs.aws.amazon.com/AWSEC2/latest/UserGuide/launching-instance.html).
The minimum recommended amount of RAM is 8GB. For example, **t3.large** or **t3a.large** would have the minimum recommended amount of resources.
## Upgrading
In order to upgrade **trains-server** on an existing EC2 instance based on one of these AMIs, SSH into the instance and follow the [upgrade instructions](../README.md#upgrade) for **trains-server**.
To upgrade **trains-server** on an existing EC2 instance based on one of these AMIs, SSH into the instance and follow the [upgrade instructions](../README.md#upgrade) for **trains-server**.
### Upgrading AMI's to v0.12
**Including the automatically updated AMI**
### Upgrading AMIs to v0.12
Version 0.12 introduced an additional REDIS docker to the trains-server setup.
This upgrade includes the automatically updated AMI in Version 0.12. It also includes an additional REDIS docker to the **trains-server** setup.
AMI upgrading instructions:
To upgrade the AMI:
1. SSH to the EC2 machine running one of the `Latest Version AMI's`
2. Execute the following bash commands
@@ -44,47 +48,86 @@ AMI upgrading instructions:
## Released versions
The following sections provide a list containing AMI Image ID per region for each released **trains-server** version.
The following sections contain lists of AMI Image IDs, per region, for each released **trains-server** version.
### Latest Version AMI <a name="autoupdate"></a>
**For easier upgrades: The following AMI automatically update to the latest release every reboot**
### Latest version AMI - v0.13.0 (auto update)<a name="autoupdate"></a>
* **eu-north-1** : ami-072aef14041e70651
* **ap-south-1** : ami-08032d881daca4de1
* **eu-west-3** : ami-0b39c123d4343d408
* **eu-west-2** : ami-0e0fe6fd14b2e9029
* **eu-west-1** : ami-087c81e06d722e938
* **ap-northeast-2** : ami-0caf74f03322b994c
* **ap-northeast-1** : ami-0f723b3d49c0f2749
* **sa-east-1** : ami-0ac5595ad0e106502
* **ca-central-1** : ami-053049b463869469a
* **ap-southeast-1** : ami-0b440ec389d6ff541
* **ap-southeast-2** : ami-02af978ddc2c15b71
* **eu-central-1** : ami-09ef364aa8df29760
* **us-east-2** : ami-02e33f8ab77071509
* **us-west-1** : ami-0ff33f256907fd460
* **us-west-2** : ami-0387728fb09c8cda7
* **us-east-1** : ami-02c47c5233eed7f88
For easier upgrades, the following AMIs automatically update to the latest release every reboot:
### v0.12.0
* **eu-north-1** : ami-0ebb4bb8637d0da65
* **ap-south-1** : ami-0fb3c89eb8a8fc294
* **eu-west-3** : ami-0b55ea4a6698d5875
* **eu-west-2** : ami-02979b6d77856b842
* **eu-west-1** : ami-07f4c17a636489574
* **ap-northeast-2** : ami-06071092427dd5ab4
* **ap-northeast-1** : ami-0fbacddfc0e8d2651
* **sa-east-1** : ami-073590d3b3e6f4cfd
* **ca-central-1** : ami-0839610fc0101e41c
* **ap-southeast-1** : ami-0ff0adeef7f9fa879
* **ap-southeast-2** : ami-03ed15d31bfc2844c
* **eu-central-1** : ami-0813c06d8b2462c39
* **us-east-2** : ami-07c593425f988b054
* **us-west-1** : ami-0eb0e13b1f06c03c0
* **us-west-2** : ami-000568ca142798412
* **us-east-1** : ami-062d9da44f96c8a87
* **eu-north-1** : ami-003024b7b575d3f2a
* **ap-south-1** : ami-0d784c7ac2ab4cc72
* **eu-west-3** : ami-091d745be445b69db
* **eu-west-2** : ami-0a4ebf5d45c672411
* **eu-west-1** : ami-021e3421c50d1482c
* **ap-northeast-2** : ami-0d0a25ec610d6d122
* **ap-northeast-1** : ami-01d896f9ae5d87890
* **sa-east-1** : ami-09bcb93835428a412
* **ca-central-1** : ami-077fa58c9f73690c7
* **ap-southeast-1** : ami-046fe4832b077b517
* **ap-southeast-2** : ami-0ab9acb41f8abbba7
* **eu-central-1** : ami-079be664aae12db00
* **us-east-2** : ami-0d48555f80cb7993a
* **us-west-1** : ami-0ed85ab91a7bb5a8a
* **us-west-2** : ami-0b4fe4ca18e9b1227
* **us-east-1** : ami-043b95dd034e581e6
### v0.13.0 (static update)
* **eu-north-1** : ami-0e26c3af1663428dc
* **ap-south-1** : ami-07451eb44f51380a8
* **eu-west-3** : ami-0108e506c6e0be8d8
* **eu-west-2** : ami-0fc1fdbc7699f0dde
* **eu-west-1** : ami-0efbf8d2f580a9cee
* **ap-northeast-2** : ami-08f0bbd7e08d0603e
* **ap-northeast-1** : ami-024522bea34dbe3ce
* **sa-east-1** : ami-0fe5b6e0ddc1553d9
* **ca-central-1** : ami-0037c26178a584ade
* **ap-southeast-1** : ami-049dbcc0f0a6dba20
* **ap-southeast-2** : ami-02d1ce8d31c27f187
* **eu-central-1** : ami-0550b14b40371182a
* **us-east-2** : ami-040a1f16ceda8f255
* **us-west-1** : ami-003b5673c08d68cdb
* **us-west-2** : ami-0fec951d8043da62d
* **us-east-1** : ami-049694de0137fdea4
### v0.12.1 (static update)
* **eu-north-1** : ami-003118a8103286d84
* **ap-south-1** : ami-02dfe86baa48e096f
* **eu-west-3** : ami-0cc1f01267d2a780d
* **eu-west-2** : ami-0e4c8332e5ce09585
* **eu-west-1** : ami-03459a2f0b0a3b1ab
* **ap-northeast-2** : ami-08f6c2aed3a53f24c
* **ap-northeast-1** : ami-0b798eab95a7c5435
* **sa-east-1** : ami-0d3ee166c09f0d1b2
* **ca-central-1** : ami-00a758c56bd63acd5
* **ap-southeast-1** : ami-0be64d4988cd03fbb
* **ap-southeast-2** : ami-02087310d43a63f31
* **eu-central-1** : ami-097bbefeac0c74225
* **us-east-2** : ami-07eda256712b90f4d
* **us-west-1** : ami-02ef2b55cbd01c7df
* **us-west-2** : ami-037c6176ef4735360
* **us-east-1** : ami-08715c20c0e3f1c15
### v0.12.0 (static update)
* **eu-north-1** : ami-03ff8ab48cd43e77e
* **ap-south-1** : ami-079c1a41ff836487c
* **eu-west-3** : ami-0121ef0398ae87ab0
* **eu-west-2** : ami-09f0f97654d8c79de
* **eu-west-1** : ami-0b7ba303f757bfcd9
* **ap-northeast-2** : ami-053f416517b5f40a6
* **ap-northeast-1** : ami-056dff06c698c2d9d
* **sa-east-1** : ami-017ab655119258639
* **ca-central-1** : ami-03bf5fa1d86ac97f6
* **ap-southeast-1** : ami-0e667958002b0360c
* **ap-southeast-2** : ami-091f1b69cb43b1933
* **eu-central-1** : ami-068ec2f0e98c26541
* **us-east-2** : ami-0524bbdc1b64ff83f
* **us-west-1** : ami-0b4facd7534e393c9
* **us-west-2** : ami-0018d5a7e58966848
* **us-east-1** : ami-08f24178fc14a84d2
### v0.11.0 (static update)
### v0.11.0
* **eu-north-1** : ami-0cbe338f058018c97
* **ap-south-1** : ami-06d72ff894f7a5e5d
* **eu-west-3** : ami-00f2a45d67df2d2f3
@@ -102,7 +145,8 @@ The following sections provide a list containing AMI Image ID per region for eac
* **us-west-2** : ami-0e384b6f78bf96ebe
* **us-east-1** : ami-0a7b46f907d5d9c4a
### v0.10.1
### v0.10.1 (static update)
* **eu-north-1** : ami-09937ec4d18350c32
* **ap-south-1** : ami-089d6ba7541ec4c7f
* **eu-west-3** : ami-0accb1a94bdd5c5c1
@@ -120,7 +164,8 @@ The following sections provide a list containing AMI Image ID per region for eac
* **us-west-2** : ami-0d1cb8ba7de246ff0
* **us-east-1** : ami-049ccba6abdb40cba
### v0.10.0
### v0.10.0 (static update)
* **eu-north-1** : ami-05ba33c763877e54e
* **ap-south-1** : ami-0529eec569161cae5
* **eu-west-3** : ami-03cb9396f63e26ff6
@@ -139,7 +184,7 @@ The following sections provide a list containing AMI Image ID per region for eac
* **us-west-2** : ami-04a522ecb2250fb44
* **us-east-1** : ami-0a66ddbd50959f91e
### v0.9.0
### v0.9.0 (static update)
* **us-east-1** : ami-0991ad536ecbacdac
* **eu-north-1** : ami-07cbcdff501b14afe
@@ -157,3 +202,4 @@ The following sections provide a list containing AMI Image ID per region for eac
* **us-east-2** : ami-03b01914b07428488
* **us-west-1** : ami-0cf4768e9d47ed076
* **us-west-2** : ami-0b145f37da31eb9fb

97
docs/install_linux_mac.md Normal file
View File

@@ -0,0 +1,97 @@
# Launching the **trains-server** Docker in Linux or macOS
For Linux or macOS, use our pre-built Docker image for easy deployment. The latest Docker images can be found [here](https://hub.docker.com/r/allegroai/trains).
For Linux users:
* You must be logged in as a user with sudo privileges.
* Use `bash` for all command-line instructions in this installation.
To launch **trains-server** on Linux or macOS:
1. Install Docker.
* Linux - see [Docker for Ubuntu](https://docs.docker.com/install/linux/docker-ce/ubuntu/).
* macOS - see [Docker for macOS](https://docs.docker.com/docker-for-mac/install/).
1. Verify the Docker CE installation. Execute the command:
sudo docker run hello-world
The expected is output is:
Hello from Docker!
This message shows that your installation appears to be working correctly.
To generate this message, Docker took the following steps:
1. The Docker client contacted the Docker daemon.
2. The Docker daemon pulled the "hello-world" image from the Docker Hub. (amd64)
3. The Docker daemon created a new container from that image which runs the executable that produces the output you are currently reading.
4. The Docker daemon streamed that output to the Docker client, which sent it to your terminal.
1. For Linux only, install `docker-compose`. Execute the following commands (for more information, see [Install Docker Compose](https://docs.docker.com/compose/install/) in the Docker documentation):
sudo curl -L "https://github.com/docker/compose/releases/download/1.24.1/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose
sudo chmod +x /usr/local/bin/docker-compose
1. Increase `vm.max_map_count` for ElasticSearch docker.
Linux:
echo "vm.max_map_count=262144" > /tmp/99-trains.conf
sudo mv /tmp/99-trains.conf /etc/sysctl.d/99-trains.conf
sudo sysctl -w vm.max_map_count=262144
sudo service docker restart
macOS:
screen ~/Library/Containers/com.docker.docker/Data/vms/0/tty
sysctl -w vm.max_map_count=262144
1. Remove any previous installation of **trains-server**.
**WARNING**: This clears all existing **Trains** databases.
sudo rm -R /opt/trains/
1. Create local directories for the databases and storage.
sudo mkdir -p /opt/trains/data/elastic
sudo mkdir -p /opt/trains/data/mongo/db
sudo mkdir -p /opt/trains/data/mongo/configdb
sudo mkdir -p /opt/trains/data/redis
sudo mkdir -p /opt/trains/logs
sudo mkdir -p /opt/trains/config
sudo mkdir -p /opt/trains/data/fileserver
1. For macOS only, open the Docker app, select **Preferences**, and then on the **File Sharing** tab, add `/opt/trains`.
1. Grant access to the Dockers.
Linux:
sudo chown -R 1000:1000 /opt/trains
macOS:
sudo chown -R $(whoami):staff /opt/trains
1. Download the **trains-server** docker-compose YAML file.
cd /opt/trains
curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose.yml -o docker-compose.yml
1. Run `docker-compose` with the downloaded configuration file.
sudo docker-compose -f docker-compose.yml up
Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
* Web server on port `8080`
* API server on port `8008`
* File server on port `8081`
## Next Step
Configure the [Trains client for trains-server](https://github.com/allegroai/trains/blob/master/README.md#configuration).

50
docs/install_win.md Normal file
View File

@@ -0,0 +1,50 @@
# Launching the **trains-server** Docker in Windows 10
For Windows, we recommend launching our pre-built Docker image on a Linux virtual machine.
However, you can launch **trains-server** on Windows 10 using Docker Desktop for Windows (see the Docker [System Requirements](https://docs.docker.com/docker-for-windows/install/#system-requirements)).
To launch **trains-server** on Windows 10:
1. Install the Docker Desktop for Windows application by either:
* Following the [Install Docker Desktop on Windows](https://docs.docker.com/docker-for-windows/install/) instructions.
* Running the Docker installation [wizard](https://hub.docker.com/?overlay=onboarding).
1. Increase the memory allocation in Docker Desktop to `4GB`.
1. In your Windows notification area (system tray), right click the Docker icon.
1. Click *Settings*, *Advanced*, and then set the memory to at least `4096`.
1. Click *Apply*.
1. Remove any previous installation of **trains-server**.
**WARNING**: This clears all existing **Trains** databases.
rmdir c:\opt\trains /s
1. Create local directories for data and logs. Open PowerShell and execute the following commands:
cd c:
mkdir c:\opt\trains\data
mkdir c:\opt\trains\logs
1. Save the **trains-server** docker-compose YAML file.
cd c:\opt\trains
curl https://raw.githubusercontent.com/allegroai/trains-server/master/docker-compose-win10.yml -o docker-compose-win10.yml
1. Run `docker-compose`. In PowerShell, execute the following commands:
docker-compose -f docker-compose-win10.yml up
Your server is now running on [http://localhost:8080](http://localhost:8080) and the following ports are available:
* Web server on port `8080`
* API server on port `8008`
* File server on port `8081`
## Next Step
Configure the [Trains client for trains-server](https://github.com/allegroai/trains/blob/master/README.md#configuration).

9
docs/services.conf Normal file
View File

@@ -0,0 +1,9 @@
tasks {
non_responsive_tasks_watchdog {
# In-progress tasks that haven't been updated for at least 'value' seconds will be stopped by the watchdog
threshold_sec: 7200
# Watchdog will sleep for this number of seconds after each cycle
watch_interval_sec: 900
}
}

View File

@@ -105,7 +105,6 @@ _error_codes = {
(403, 'forbidden'): {
10: ('routing_error', 'forbidden (routing error)'),
11: ('missing_routing_header', 'forbidden (missing routing header)'),
12: ('blocked_internal_endpoint', 'forbidden (blocked internal endpoint)'),
20: ('role_not_allowed', 'forbidden (not allowed for role)'),
21: ('no_write_permission', 'forbidden (modification not allowed)'),
@@ -121,6 +120,7 @@ _error_codes = {
100: ('data_error', 'general data error'),
101: ('inconsistent_data', 'inconsistent data encountered in document'),
102: ('database_unavailable', 'database is temporarily unavailable'),
110: ('update_failed', 'update failed'),
# Index-related issues
201: ('missing_index', 'missing internal index'),

View File

@@ -5,12 +5,12 @@ from typing import Union, Type, Iterable
import jsonmodels.errors
import six
import validators
from jsonmodels import fields
from jsonmodels.fields import _LazyType, NotSet
from jsonmodels.models import Base as ModelBase
from jsonmodels.validators import Enum as EnumValidator
from luqum.parser import parser, ParseError
from validators import email as email_validator, domain as domain_validator
from apierrors import errors
@@ -66,9 +66,7 @@ class DictField(fields.BaseField):
value_types = tuple()
return tuple(
_LazyType(type_)
if isinstance(type_, six.string_types)
else type_
_LazyType(type_) if isinstance(type_, six.string_types) else type_
for type_ in value_types
)
@@ -78,6 +76,9 @@ class DictField(fields.BaseField):
if not self.value_types:
return
if not value:
return
for item in value.values():
self.validate_single_value(item)
@@ -104,7 +105,7 @@ class IntField(fields.IntField):
def validate_lucene_query(value):
if value == '':
if value == "":
return
try:
parser.parse(value)
@@ -122,6 +123,7 @@ class LuceneQueryField(fields.StringField):
class NullableEnumValidator(EnumValidator):
"""Validator for enums that allows a None value."""
def validate(self, value):
if value is not None:
super(NullableEnumValidator, self).validate(value)
@@ -150,10 +152,6 @@ class EnumField(fields.StringField):
class ActualEnumField(fields.StringField):
@property
def types(self):
return (self.__enum,)
def __init__(
self,
enum_class: Type[Enum],
@@ -164,6 +162,7 @@ class ActualEnumField(fields.StringField):
**kwargs
):
self.__enum = enum_class
self.types = (enum_class,)
# noinspection PyTypeChecker
choices = list(enum_class)
validator_cls = EnumValidator if required else NullableEnumValidator
@@ -194,7 +193,7 @@ class EmailField(fields.StringField):
super().validate(value)
if value is None:
return
if validators.email(value) is not True:
if email_validator(value) is not True:
raise errors.bad_request.InvalidEmailAddress()
@@ -203,7 +202,7 @@ class DomainField(fields.StringField):
super().validate(value)
if value is None:
return
if validators.domain(value) is not True:
if domain_validator(value) is not True:
raise errors.bad_request.InvalidDomainName()

View File

@@ -58,3 +58,7 @@ class UpdateResponse(models.Base):
class PagedRequest(models.Base):
page = fields.IntField()
page_size = fields.IntField()
class IdResponse(models.Base):
id = fields.StringField(required=True)

View File

@@ -9,7 +9,7 @@ from apimodels.tasks import PublishResponse as TaskPublishResponse
class CreateModelRequest(models.Base):
name = fields.StringField(required=True)
uri = fields.StringField(required=True)
labels = DictField(value_types=string_types+(int,), required=True)
labels = DictField(value_types=string_types+(int,))
tags = ListField(items_types=string_types)
system_tags = ListField(items_types=string_types)
comment = fields.StringField()

View File

@@ -0,0 +1,15 @@
from jsonmodels.fields import BoolField, DateTimeField, StringField
from jsonmodels.models import Base
class ReportStatsOptionRequest(Base):
enabled = BoolField(default=None, nullable=True)
class ReportStatsOptionResponse(Base):
supported = BoolField(default=True)
enabled = BoolField()
enabled_time = DateTimeField(nullable=True)
enabled_version = StringField(nullable=True)
enabled_user = StringField(nullable=True)
current_version = StringField()

View File

@@ -1,6 +1,6 @@
import six
from jsonmodels import models
from jsonmodels.fields import StringField, BoolField, IntField
from jsonmodels.fields import StringField, BoolField, IntField, EmbeddedField
from jsonmodels.validators import Enum
from apimodels import DictField, ListField
@@ -9,6 +9,24 @@ from database.model.task.task import TaskType
from database.utils import get_options
class ArtifactTypeData(models.Base):
preview = StringField()
content_type = StringField()
data_hash = StringField()
class Artifact(models.Base):
key = StringField(required=True)
type = StringField(required=True)
mode = StringField(validators=Enum("input", "output"), default="output")
uri = StringField()
hash = StringField()
content_size = IntField()
timestamp = IntField()
type_data = EmbeddedField(ArtifactTypeData)
display_data = ListField([list])
class StartedResponse(UpdateResponse):
started = IntField()
@@ -72,3 +90,22 @@ class CreateRequest(TaskData):
class PingRequest(TaskRequest):
pass
class CloneRequest(TaskRequest):
new_task_name = StringField()
new_task_comment = StringField()
new_task_tags = ListField([str])
new_task_system_tags = ListField([str])
new_task_parent = StringField()
new_task_project = StringField()
execution_overrides = DictField()
class AddOrUpdateArtifactsRequest(TaskRequest):
artifacts = ListField([Artifact], required=True)
class AddOrUpdateArtifactsResponse(models.Base):
added = ListField([str])
updated = ListField([str])

View File

@@ -1,3 +1,4 @@
import hashlib
from collections import defaultdict
from contextlib import closing
from datetime import datetime
@@ -16,6 +17,7 @@ import es_factory
from apierrors import errors
from bll.event.event_metrics import EventMetrics
from bll.task import TaskBLL
from config import config
from database.errors import translate_errors_context
from database.model.task.task import Task, TaskStatus
from timing_context import TimingContext
@@ -45,11 +47,12 @@ class TaskEventsResult(object):
class EventBLL(object):
id_fields = ["task", "iter", "metric", "variant", "key"]
id_fields = ("task", "iter", "metric", "variant", "key")
def __init__(self, events_es=None):
self.es = events_es or es_factory.connect("events")
self._metrics = EventMetrics(self.es)
self._skip_iteration_for_metric = set(config.get("services.events.ignore_iteration.metrics", []))
@property
def metrics(self) -> EventMetrics:
@@ -121,7 +124,7 @@ class EventBLL(object):
if task_id is not None:
es_action["_routing"] = task_id
task_ids.add(task_id)
if iter is not None:
if iter is not None and event.get("metric") not in self._skip_iteration_for_metric:
task_iteration[task_id] = max(iter, task_iteration[task_id])
if event_type == EventType.metrics_scalar.value:
@@ -245,7 +248,7 @@ class EventBLL(object):
def _get_event_id(self, event):
id_values = (str(event[field]) for field in self.id_fields if field in event)
return "-".join(id_values)
return hashlib.md5("-".join(id_values).encode()).hexdigest()
def scroll_task_events(
self,

View File

@@ -161,7 +161,7 @@ class QueueMetrics:
In case no queue ids are specified the avg across all the
company queues is calculated for each metric
"""
# self._log_current_metrics(company_id, queue_ids=queue_ids)
# self._log_current_metrics(company, queue_ids=queue_ids)
if from_date >= to_date:
raise bad_request.FieldsValueError("from_date must be less than to_date")

View File

@@ -0,0 +1,90 @@
from datetime import datetime
import operator
from threading import Thread, Lock
from time import sleep
import attr
import psutil
from utilities.threads_manager import ThreadsManager
class ResourceMonitor(Thread):
@attr.s(auto_attribs=True)
class Sample:
cpu_usage: float = 0.0
mem_used_gb: float = 0
mem_free_gb: float = 0
@classmethod
def _apply(cls, op, *samples):
return cls(
**{
field: op(*(getattr(sample, field) for sample in samples))
for field in attr.fields_dict(cls)
}
)
def min(self, sample):
return self._apply(min, self, sample)
def max(self, sample):
return self._apply(max, self, sample)
def avg(self, sample, count):
res = self._apply(lambda x: x * count, self)
res = self._apply(operator.add, res, sample)
res = self._apply(lambda x: x / (count + 1), res)
return res
def __init__(self, sample_interval_sec=5):
super(ResourceMonitor, self).__init__(daemon=True)
self.sample_interval_sec = sample_interval_sec
self._lock = Lock()
self._clear()
def _clear(self):
sample = self._get_sample()
self._avg = sample
self._min = sample
self._max = sample
self._clear_time = datetime.utcnow()
self._count = 1
@classmethod
def _get_sample(cls) -> Sample:
return cls.Sample(
cpu_usage=psutil.cpu_percent(),
mem_used_gb=psutil.virtual_memory().used / (1024 ** 3),
mem_free_gb=psutil.virtual_memory().free / (1024 ** 3),
)
def run(self):
while not ThreadsManager.terminating:
sleep(self.sample_interval_sec)
sample = self._get_sample()
with self._lock:
self._min = self._min.min(sample)
self._max = self._max.max(sample)
self._avg = self._avg.avg(sample, self._count)
self._count += 1
def get_stats(self) -> dict:
""" Returns current resource statistics and clears internal resource statistics """
with self._lock:
min_ = attr.asdict(self._min)
max_ = attr.asdict(self._max)
avg = attr.asdict(self._avg)
interval = datetime.utcnow() - self._clear_time
self._clear()
return {
"interval_sec": interval.total_seconds(),
"num_cores": psutil.cpu_count(),
**{
k: {"min": v, "max": max_[k], "avg": avg[k]}
for k, v in min_.items()
}
}

View File

@@ -0,0 +1,305 @@
import logging
import queue
import random
import time
from datetime import timedelta, datetime
from time import sleep
from typing import Sequence, Optional
import dpath
import requests
from requests.adapters import HTTPAdapter
from requests.packages.urllib3.util.retry import Retry
from bll.query import Builder as QueryBuilder
from bll.util import get_server_uuid
from bll.workers import WorkerStats, WorkerBLL
from config import config
from config.info import get_deployment_type
from database.model import Company, User
from database.model.queue import Queue
from database.model.task.task import Task
from utilities import safe_get
from utilities.json import dumps
from utilities.threads_manager import ThreadsManager
from version import __version__ as current_version
from .resource_monitor import ResourceMonitor
log = config.logger(__file__)
worker_bll = WorkerBLL()
class StatisticsReporter:
threads = ThreadsManager("Statistics", resource_monitor=ResourceMonitor)
send_queue = queue.Queue()
supported = config.get("apiserver.statistics.supported", True)
@classmethod
def start(cls):
cls.start_sender()
cls.start_reporter()
@classmethod
@threads.register("reporter", daemon=True)
def start_reporter(cls):
"""
Periodically send statistics reports for companies who have opted in.
Note: in trains we usually have only a single company
"""
if not cls.supported:
return
report_interval = timedelta(
hours=config.get("apiserver.statistics.report_interval_hours", 24)
)
sleep(report_interval.total_seconds())
while not ThreadsManager.terminating:
try:
for company in Company.objects(
defaults__stats_option__enabled=True
).only("id"):
stats = cls.get_statistics(company.id)
cls.send_queue.put(stats)
except Exception as ex:
log.exception(f"Failed collecting stats: {str(ex)}")
sleep(report_interval.total_seconds())
@classmethod
@threads.register("sender", daemon=True)
def start_sender(cls):
if not cls.supported:
return
url = config.get("apiserver.statistics.url")
retries = config.get("apiserver.statistics.max_retries", 5)
max_backoff = config.get("apiserver.statistics.max_backoff_sec", 5)
session = requests.Session()
adapter = HTTPAdapter(max_retries=Retry(retries))
session.mount("http://", adapter)
session.mount("https://", adapter)
session.headers["Content-type"] = "application/json"
WarningFilter.attach()
while not ThreadsManager.terminating:
try:
report = cls.send_queue.get()
# Set a random backoff factor each time we send a report
adapter.max_retries.backoff_factor = random.random() * max_backoff
session.post(url, data=dumps(report))
except Exception as ex:
pass
@classmethod
def get_statistics(cls, company_id: str) -> dict:
"""
Returns a statistics report per company
"""
return {
"time": datetime.utcnow(),
"company_id": company_id,
"server": {
"version": current_version,
"deployment": get_deployment_type(),
"uuid": get_server_uuid(),
"queues": {"count": Queue.objects(company=company_id).count()},
"users": {"count": User.objects(company=company_id).count()},
"resources": cls.threads.resource_monitor.get_stats(),
"experiments": next(
iter(cls._get_experiments_stats(company_id).values()), {}
),
},
"agents": cls._get_agents_statistics(company_id),
}
@classmethod
def _get_agents_statistics(cls, company_id: str) -> Sequence[dict]:
result = cls._get_resource_stats_per_agent(company_id, key="resources")
dpath.merge(
result, cls._get_experiments_stats_per_agent(company_id, key="experiments")
)
return [{"uuid": agent_id, **data} for agent_id, data in result.items()]
@classmethod
def _get_resource_stats_per_agent(cls, company_id: str, key: str) -> dict:
agent_resource_threshold_sec = timedelta(
hours=config.get("apiserver.statistics.report_interval_hours", 24)
).total_seconds()
to_timestamp = int(time.time())
from_timestamp = to_timestamp - int(agent_resource_threshold_sec)
es_req = {
"size": 0,
"query": QueryBuilder.dates_range(from_timestamp, to_timestamp),
"aggs": {
"workers": {
"terms": {"field": "worker"},
"aggs": {
"categories": {
"terms": {"field": "category"},
"aggs": {"count": {"cardinality": {"field": "variant"}}},
},
"metrics": {
"terms": {"field": "metric"},
"aggs": {
"min": {"min": {"field": "value"}},
"max": {"max": {"field": "value"}},
"avg": {"avg": {"field": "value"}},
},
},
},
}
},
}
res = cls._run_worker_stats_query(company_id, es_req)
def _get_cardinality_fields(categories: Sequence[dict]) -> dict:
names = {"cpu": "num_cores"}
return {
names[c["key"]]: safe_get(c, "count/value")
for c in categories
if c["key"] in names
}
def _get_metric_fields(metrics: Sequence[dict]) -> dict:
names = {
"cpu_usage": "cpu_usage",
"memory_used": "mem_used_gb",
"memory_free": "mem_free_gb",
}
return {
names[m["key"]]: {
"min": safe_get(m, "min/value"),
"max": safe_get(m, "max/value"),
"avg": safe_get(m, "avg/value"),
}
for m in metrics
if m["key"] in names
}
buckets = safe_get(res, "aggregations/workers/buckets", default=[])
return {
b["key"]: {
key: {
"interval_sec": agent_resource_threshold_sec,
**_get_cardinality_fields(safe_get(b, "categories/buckets", [])),
**_get_metric_fields(safe_get(b, "metrics/buckets", [])),
}
}
for b in buckets
}
@classmethod
def _get_experiments_stats_per_agent(cls, company_id: str, key: str) -> dict:
agent_relevant_threshold = timedelta(
days=config.get("apiserver.statistics.agent_relevant_threshold_days", 30)
)
to_timestamp = int(time.time())
from_timestamp = to_timestamp - int(agent_relevant_threshold.total_seconds())
workers = cls._get_active_workers(company_id, from_timestamp, to_timestamp)
if not workers:
return {}
stats = cls._get_experiments_stats(company_id, list(workers.keys()))
return {
worker_id: {key: {**workers[worker_id], **stat}}
for worker_id, stat in stats.items()
}
@classmethod
def _get_active_workers(
cls, company_id, from_timestamp: int, to_timestamp: int
) -> dict:
es_req = {
"size": 0,
"query": QueryBuilder.dates_range(from_timestamp, to_timestamp),
"aggs": {
"workers": {
"terms": {"field": "worker"},
"aggs": {"last_activity_time": {"max": {"field": "timestamp"}}},
}
},
}
res = cls._run_worker_stats_query(company_id, es_req)
buckets = safe_get(res, "aggregations/workers/buckets", default=[])
return {
b["key"]: {"last_activity_time": b["last_activity_time"]["value"]}
for b in buckets
}
@classmethod
def _run_worker_stats_query(cls, company_id, es_req) -> dict:
return worker_bll.es_client.search(
index=f"{WorkerStats.worker_stats_prefix_for_company(company_id)}*",
doc_type="stat",
body=es_req,
)
@classmethod
def _get_experiments_stats(
cls, company_id, workers: Optional[Sequence] = None
) -> dict:
pipeline = [
{
"$match": {
"company": company_id,
"started": {"$exists": True, "$ne": None},
"last_update": {"$exists": True, "$ne": None},
"status": {"$nin": ["created", "queued"]},
**({"last_worker": {"$in": workers}} if workers else {}),
}
},
{
"$group": {
"_id": "$last_worker" if workers else None,
"count": {"$sum": 1},
"avg_run_time_sec": {
"$avg": {
"$divide": [
{"$subtract": ["$last_update", "$started"]},
1000,
]
}
},
"avg_iterations": {"$avg": "$last_iteration"},
}
},
{
"$project": {
"count": 1,
"avg_run_time_sec": {"$trunc": "$avg_run_time_sec"},
"avg_iterations": {"$trunc": "$avg_iterations"},
}
},
]
return {
group["_id"]: {k: v for k, v in group.items() if k != "_id"}
for group in Task.aggregate(*pipeline)
}
class WarningFilter(logging.Filter):
@classmethod
def attach(cls):
from urllib3.connectionpool import (
ConnectionPool,
) # required to make sure the logger is created
assert ConnectionPool # make sure import is not optimized out
logging.getLogger("urllib3.connectionpool").addFilter(cls())
def filter(self, record):
if (
record.levelno == logging.WARNING
and len(record.args) > 2
and record.args[2] == "/stats"
):
return False
return True

View File

@@ -4,4 +4,5 @@ from .utils import (
update_project_time,
validate_status_change,
split_by,
ParameterKeyEscaper,
)

View File

@@ -1,15 +1,18 @@
import re
from collections import OrderedDict
from datetime import datetime, timedelta
from operator import attrgetter
from random import random
from time import sleep
from typing import Collection, Sequence, Tuple, Any
from typing import Collection, Sequence, Tuple, Any, Optional, List
import pymongo.results
import six
from mongoengine import Q
from six import string_types
import es_factory
from apierrors import errors
from apimodels.tasks import Artifact as ApiArtifact
from config import config
from database.errors import translate_errors_context
from database.model.model import Model
@@ -20,16 +23,21 @@ from database.model.task.task import (
TaskStatus,
TaskStatusMessage,
TaskSystemTags,
ArtifactModes,
Artifact,
)
from database.utils import get_company_or_none_constraint, id as create_id
from service_repo import APICall
from timing_context import TimingContext
from utilities.dicts import deep_merge
from utilities.threads_manager import ThreadsManager
from .utils import ChangeStatusRequest, validate_status_change
from .utils import ChangeStatusRequest, validate_status_change, ParameterKeyEscaper
log = config.logger(__file__)
class TaskBLL(object):
threads = ThreadsManager()
threads = ThreadsManager("TaskBLL")
def __init__(self, events_es=None):
self.events_es = (
@@ -144,6 +152,59 @@ class TaskBLL(object):
return model
@classmethod
def clone_task(
cls,
company_id,
user_id,
task_id,
name: Optional[str] = None,
comment: Optional[str] = None,
parent: Optional[str] = None,
project: Optional[str] = None,
tags: Optional[Sequence[str]] = None,
system_tags: Optional[Sequence[str]] = None,
execution_overrides: Optional[dict] = None,
) -> Task:
task = cls.get_by_id(company_id=company_id, task_id=task_id)
execution_dict = task.execution.to_proper_dict() if task.execution else {}
if execution_overrides:
parameters = execution_overrides.get("parameters")
if parameters is not None:
execution_overrides["parameters"] = {
ParameterKeyEscaper.escape(k): v for k, v in parameters.items()
}
execution_dict = deep_merge(execution_dict, execution_overrides)
artifacts = execution_dict.get("artifacts")
if artifacts:
execution_dict["artifacts"] = [
a for a in artifacts if a.get("mode") != ArtifactModes.output
]
now = datetime.utcnow()
with translate_errors_context():
new_task = Task(
id=create_id(),
user=user_id,
company=company_id,
created=now,
last_update=now,
name=name or task.name,
comment=comment or task.comment,
parent=parent or task.parent,
project=project or task.project,
tags=tags or task.tags,
system_tags=system_tags or [],
type=task.type,
script=task.script,
output=Output(destination=task.output.destination) if task.output else None,
execution=execution_dict,
)
cls.validate(new_task)
new_task.save()
return new_task
@classmethod
def validate(cls, task: Task):
assert isinstance(task, Task)
@@ -153,23 +214,13 @@ class TaskBLL(object):
):
raise errors.bad_request.InvalidTaskId("invalid parent", parent=task.parent)
if task.project:
Project.get_for_writing(company=task.company, id=task.project)
if task.project and not Project.get_for_writing(
company=task.company, id=task.project
):
raise errors.bad_request.InvalidProjectId(id=task.project)
cls.validate_execution_model(task)
if task.execution:
if task.execution.parameters:
cls._validate_execution_parameters(task.execution.parameters)
@staticmethod
def _validate_execution_parameters(parameters):
invalid_keys = [k for k in parameters if re.search(r"\s", k)]
if invalid_keys:
raise errors.bad_request.ValidationError(
"execution.parameters keys contain whitespace", keys=invalid_keys
)
@staticmethod
def get_unique_metric_variants(company_id, project_ids=None):
pipeline = [
@@ -373,7 +424,7 @@ class TaskBLL(object):
:return: updated task fields
"""
task = TaskBLL.get_task_with_access(
task = cls.get_task_with_access(
task_id,
company_id=company_id,
only=(
@@ -411,6 +462,97 @@ class TaskBLL(object):
force=force,
).execute()
@classmethod
def add_or_update_artifacts(
cls, task_id: str, company_id: str, artifacts: List[ApiArtifact]
) -> Tuple[List[str], List[str]]:
key = attrgetter("key", "mode")
if not artifacts:
return [], []
with translate_errors_context(), TimingContext("mongo", "update_artifacts"):
artifacts: List[Artifact] = [
Artifact(**artifact.to_struct()) for artifact in artifacts
]
attempts = int(config.get("services.tasks.artifacts.update_attempts", 10))
for retry in range(attempts):
task = cls.get_task_with_access(
task_id, company_id=company_id, requires_write_access=True
)
current = list(map(key, task.execution.artifacts))
updated = [a for a in artifacts if key(a) in current]
added = [a for a in artifacts if a not in updated]
filter = {"_id": task_id, "company": company_id}
update = {}
array_filters = None
if current:
filter["execution.artifacts"] = {
"$size": len(current),
"$all": [
*(
{"$elemMatch": {"key": key, "mode": mode}}
for key, mode in current
)
],
}
else:
filter["$or"] = [
{"execution.artifacts": {"$exists": False}},
{"execution.artifacts": {"$size": 0}},
]
if added:
update["$push"] = {
"execution.artifacts": {"$each": [a.to_mongo() for a in added]}
}
if updated:
update["$set"] = {
f"execution.artifacts.$[artifact{index}]": artifact.to_mongo()
for index, artifact in enumerate(updated)
}
array_filters = [
{
f"artifact{index}.key": artifact.key,
f"artifact{index}.mode": artifact.mode,
}
for index, artifact in enumerate(updated)
]
if not update:
return [], []
result: pymongo.results.UpdateResult = Task._get_collection().update_one(
filter=filter,
update=update,
array_filters=array_filters,
upsert=False,
)
if result.matched_count >= 1:
break
wait_msec = random() * int(
config.get("services.tasks.artifacts.update_retry_msec", 500)
)
log.warning(
f"Failed to update artifacts for task {task_id} (updated by another party),"
f" retrying {retry+1}/{attempts} in {wait_msec}ms"
)
sleep(wait_msec / 1000)
else:
raise errors.server_error.UpdateFailed(
"task artifacts updated by another party"
)
return [a.key for a in added], [a.key for a in updated]
@classmethod
@threads.register("non_responsive_tasks_watchdog", daemon=True)
def start_non_responsive_tasks_watchdog(cls):
@@ -421,13 +563,11 @@ class TaskBLL(object):
"services.tasks.non_responsive_tasks_watchdog.threshold_sec", 7200
)
)
while True:
sleep(
config.get(
"services.tasks.non_responsive_tasks_watchdog.watch_interval_sec",
900,
)
)
watch_interval = config.get(
"services.tasks.non_responsive_tasks_watchdog.watch_interval_sec", 900
)
sleep(watch_interval)
while not ThreadsManager.terminating:
try:
ref_time = datetime.utcnow() - threshold
@@ -463,6 +603,8 @@ class TaskBLL(object):
except Exception as ex:
log.exception(f"Failed stopping tasks: {str(ex)}")
sleep(watch_interval)
@staticmethod
def get_aggregated_project_execution_parameters(
company_id,
@@ -502,10 +644,7 @@ class TaskBLL(object):
]
with translate_errors_context():
result = next(
Task.aggregate(*pipeline),
None,
)
result = next(Task.aggregate(*pipeline), None)
total = 0
remaining = 0
@@ -513,7 +652,10 @@ class TaskBLL(object):
if result:
total = int(result.get("total", -1))
results = [r["_id"] for r in result.get("results", [])]
results = [
ParameterKeyEscaper.unescape(r["_id"])
for r in result.get("results", [])
]
remaining = max(0, total - (len(results) + page * page_size))
return total, remaining, results

View File

@@ -3,6 +3,7 @@ from typing import TypeVar, Callable, Tuple, Sequence
import attr
import six
from boltons.dictutils import OneToOne
from apierrors import errors
from database.errors import translate_errors_context
@@ -171,3 +172,26 @@ def split_by(
[item for cond, item in applied if cond],
[item for cond, item in applied if not cond],
)
class ParameterKeyEscaper:
_mapping = OneToOne({".": "%2E", "$": "%24"})
@classmethod
def escape(cls, value):
""" Quote a parameter key """
value = value.strip().replace("%", "%%")
for c, r in cls._mapping.items():
value = value.replace(c, r)
return value
@classmethod
def _unescape(cls, value):
for c, r in cls._mapping.inv.items():
value = value.replace(c, r)
return value
@classmethod
def unescape(cls, value):
""" Unquote a quoted parameter key """
return "%".join(map(cls._unescape, value.split("%%")))

View File

@@ -1,7 +1,9 @@
import functools
from operator import itemgetter
from typing import Sequence, Optional, Callable, Tuple, Dict, Any, Set
from database.model import AttributedDocument
from database.model.settings import Settings
def extract_properties_to_lists(
@@ -64,3 +66,8 @@ class SetFieldsResolver:
in the format suitable for projection (dot separated)
"""
return set(name.replace("__", ".") for name in self.fields.values())
@functools.lru_cache()
def get_server_uuid() -> Optional[str]:
return Settings.get_by_key("server.uuid")

View File

@@ -4,6 +4,7 @@ from typing import Sequence, Set, Optional
import attr
import elasticsearch.helpers
import es_factory
from apierrors import APIError
from apierrors.errors import bad_request, server_error
@@ -22,10 +23,9 @@ from database.model.auth import User
from database.model.company import Company
from database.model.queue import Queue
from database.model.task.task import Task
from service_repo.redis_manager import redman
from redis_manager import redman
from timing_context import TimingContext
from tools import safe_get
from .stats import WorkerStats
log = config.logger(__file__)
@@ -33,9 +33,9 @@ log = config.logger(__file__)
class WorkerBLL:
def __init__(self, es=None, redis=None):
self.es = es if es is not None else es_factory.connect("workers")
self.es_client = es if es is not None else es_factory.connect("workers")
self.redis = redis if redis is not None else redman.connection("workers")
self._stats = WorkerStats(self.es)
self._stats = WorkerStats(self.es_client)
@property
def stats(self) -> WorkerStats:
@@ -396,7 +396,7 @@ class WorkerBLL:
for i, val in enumerate(value)
)
es_res = elasticsearch.helpers.bulk(self.es, actions)
es_res = elasticsearch.helpers.bulk(self.es_client, actions)
added, errors = es_res[:2]
return (added == len(actions)) and not errors

View File

@@ -101,4 +101,18 @@
# GET request timeout
request_timeout_sec: 3.0
}
statistics {
# Note: statistics are sent ONLY if the user has actively opted-in
supported: true
url: "https://updates.trains.allegro.ai/stats"
report_interval_hours: 24
agent_relevant_threshold_days: 30
max_retries: 5
max_backoff_sec: 5
}
}

View File

@@ -1,3 +1,5 @@
{
es_index_prefix:"events"
es_index_prefix: "events"
ignore_iteration {
metrics: [":monitor:machine", ":monitor:gpu"]
}

View File

@@ -5,3 +5,8 @@ non_responsive_tasks_watchdog {
# Watchdog will sleep for this number of seconds after each cycle
watch_interval_sec: 900
}
artifacts {
update_attempts: 10
update_retry_msec: 500
}

View File

@@ -1,28 +1,43 @@
from functools import lru_cache
from os import getenv
from pathlib import Path
from version import __version__
from config import config
root = Path(__file__).parent.parent
def _get(prop_name, env_suffix=None, default=""):
value = getenv(f"TRAINS_SERVER_{env_suffix or prop_name}")
if value:
return value
try:
return (root / prop_name).read_text().strip()
except FileNotFoundError:
return default
@lru_cache()
def get_build_number():
try:
return (root / "BUILD").read_text().strip()
except FileNotFoundError:
return ""
return _get("BUILD")
@lru_cache()
def get_version():
try:
return (root / "VERSION").read_text().strip()
except FileNotFoundError:
return ""
return _get("VERSION", default=__version__)
@lru_cache()
def get_commit_number():
try:
return (root / "COMMIT").read_text().strip()
except FileNotFoundError:
return ""
return _get("COMMIT")
@lru_cache()
def get_deployment_type() -> str:
return _get("DEPLOY", env_suffix="DEPLOYMENT_TYPE", default="manual")
def get_default_company():
return config.get("apiserver.default_company")

View File

@@ -1,5 +1,6 @@
from os import getenv
from boltons.iterutils import first
from furl import furl
from jsonmodels import models
from jsonmodels.errors import ValidationError
@@ -11,14 +12,16 @@ from config import config
from .defs import Database
from .utils import get_items
from boltons.iterutils import first
log = config.logger("database")
strict = config.get("apiserver.mongo.strict", True)
OVERRIDE_HOST_ENV_KEY = ("MONGODB_SERVICE_HOST", "MONGODB_SERVICE_SERVICE_HOST")
OVERRIDE_PORT_ENV_KEY = "MONGODB_SERVICE_PORT"
OVERRIDE_HOST_ENV_KEY = (
"TRAINS_MONGODB_SERVICE_HOST",
"MONGODB_SERVICE_HOST",
"MONGODB_SERVICE_SERVICE_HOST",
)
OVERRIDE_PORT_ENV_KEY = ("TRAINS_MONGODB_SERVICE_PORT", "MONGODB_SERVICE_PORT")
_entries = []
@@ -41,7 +44,7 @@ def initialize():
if override_hostname:
log.info(f"Using override mongodb host {override_hostname}")
override_port = getenv(OVERRIDE_PORT_ENV_KEY)
override_port = first(map(getenv, OVERRIDE_PORT_ENV_KEY), None)
if override_port:
log.info(f"Using override mongodb port {override_port}")

View File

@@ -52,7 +52,7 @@ class User(DbModelMixin, AuthDocument):
meta = {"db_alias": Database.auth, "strict": strict}
id = StringField(primary_key=True)
name = StringField(unique_with="company")
name = StringField()
created = DateTimeField()
""" User auth entry creation time """

View File

@@ -1,7 +1,7 @@
import re
from collections import namedtuple
from functools import reduce
from typing import Collection, Sequence, Union
from typing import Collection, Sequence, Union, Optional
from boltons.iterutils import first
from dateutil.parser import parse as parse_datetime
@@ -60,7 +60,7 @@ class ProperDictMixin(object):
class GetMixin(PropsMixin):
_text_score = "$text_score"
_projection_key = "projection"
_ordering_key = "order_by"
_search_text_key = "search_text"
@@ -270,11 +270,26 @@ class GetMixin(PropsMixin):
return override_projection
if not parameters:
return []
return parameters.get("projection") or parameters.get("only_fields", [])
return parameters.get(cls._projection_key) or parameters.get("only_fields", [])
@classmethod
def set_default_ordering(cls, parameters, value):
parameters[cls._ordering_key] = parameters.get(cls._ordering_key) or value
def set_projection(cls, parameters: dict, value: Sequence[str]) -> Sequence[str]:
parameters.pop("only_fields", None)
parameters[cls._projection_key] = value
return value
@classmethod
def get_ordering(cls, parameters: dict) -> Optional[Sequence[str]]:
return parameters.get(cls._ordering_key)
@classmethod
def set_ordering(cls, parameters: dict, value: Sequence[str]) -> Sequence[str]:
parameters[cls._ordering_key] = value
return value
@classmethod
def set_default_ordering(cls, parameters: dict, value: Sequence[str]) -> None:
cls.set_ordering(parameters, cls.get_ordering(parameters) or value)
@classmethod
def get_many_with_join(

View File

@@ -1,23 +1,36 @@
from mongoengine import Document, EmbeddedDocument, EmbeddedDocumentField, StringField, Q
from mongoengine import (
Document,
EmbeddedDocument,
EmbeddedDocumentField,
StringField,
Q,
BooleanField,
DateTimeField,
)
from database import Database, strict
from database.fields import StrippedStringField
from database.model import DbModelMixin
class ReportStatsOption(EmbeddedDocument):
enabled = BooleanField(default=False) # opt-in for statistics reporting
enabled_version = StringField() # server version when enabled
enabled_time = DateTimeField() # time when enabled
enabled_user = StringField() # ID of user who enabled
class CompanyDefaults(EmbeddedDocument):
cluster = StringField()
stats_option = EmbeddedDocumentField(ReportStatsOption, default=ReportStatsOption)
class Company(DbModelMixin, Document):
meta = {
'db_alias': Database.backend,
'strict': strict,
}
meta = {"db_alias": Database.backend, "strict": strict}
id = StringField(primary_key=True)
name = StrippedStringField(unique=True, min_length=3)
defaults = EmbeddedDocumentField(CompanyDefaults)
defaults = EmbeddedDocumentField(CompanyDefaults, default=CompanyDefaults)
@classmethod
def _prepare_perm_query(cls, company, allow_public=False):

View File

@@ -0,0 +1,53 @@
from typing import Any, Optional, Sequence, Tuple
from mongoengine import Document, StringField, DynamicField, Q
from mongoengine.errors import NotUniqueError
from database import Database, strict
from database.model import DbModelMixin
class Settings(DbModelMixin, Document):
meta = {
"db_alias": Database.backend,
"strict": strict,
}
key = StringField(primary_key=True)
value = DynamicField()
@classmethod
def get_by_key(cls, key: str, default: Optional[Any] = None, sep: str = ".") -> Any:
key = key.strip(sep)
res = Settings.objects(key=key).first()
if not res:
return default
return res.value
@classmethod
def get_by_prefix(
cls, key_prefix: str, default: Optional[Any] = None, sep: str = "."
) -> Sequence[Tuple[str, Any]]:
key_prefix = key_prefix.strip(sep)
query = Q(key=key_prefix) | Q(key__startswith=key_prefix + sep)
res = Settings.objects(query)
if not res:
return default
return [(x.key, x.value) for x in res]
@classmethod
def set_or_add_value(cls, key: str, value: Any, sep: str = ".") -> bool:
""" Sets a new value or adds a new key/value setting (if key does not exist) """
key = key.strip(sep)
res = Settings.objects(key=key).update(key=key, value=value, upsert=True)
return bool(res)
@classmethod
def add_value(cls, key: str, value: Any, sep: str = ".") -> bool:
""" Adds a new key/value settings. Fails if key already exists. """
key = key.strip(sep)
try:
res = Settings(key=key, value=value).save(force_insert=True)
return bool(res)
except NotUniqueError:
return False

View File

@@ -18,6 +18,7 @@ from database.fields import (
SafeSortedListField,
)
from database.model import AttributedDocument
from database.model.base import ProperDictMixin
from database.model.model_labels import ModelLabels
from database.model.project import Project
from database.utils import get_options
@@ -66,10 +67,15 @@ class ArtifactTypeData(EmbeddedDocument):
data_hash = StringField()
class ArtifactModes:
input = "input"
output = "output"
class Artifact(EmbeddedDocument):
key = StringField(required=True)
type = StringField(required=True)
mode = StringField(choices=("input", "output"), default="output")
mode = StringField(choices=get_options(ArtifactModes), default=ArtifactModes.output)
uri = StringField()
hash = StringField()
content_size = LongField()
@@ -78,7 +84,7 @@ class Artifact(EmbeddedDocument):
display_data = SafeSortedListField(ListField(UnionField((int, float, str))))
class Execution(EmbeddedDocument):
class Execution(EmbeddedDocument, ProperDictMixin):
test_split = IntField(default=0)
parameters = SafeDictField(default=dict)
model = StringField(reference_field="Model")

View File

@@ -1,7 +1,6 @@
from mongoengine import Document, StringField
from mongoengine import Document, StringField, DynamicField
from database import Database, strict
from database.fields import SafeDictField
from database.model import DbModelMixin
from database.model.company import Company
@@ -18,4 +17,4 @@ class User(DbModelMixin, Document):
family_name = StringField(user_set_allowed=True)
given_name = StringField(user_set_allowed=True)
avatar = StringField()
preferences = SafeDictField(default=dict, exclude_by_default=True)
preferences = DynamicField(default="", exclude_by_default=True)

View File

@@ -10,7 +10,11 @@ from pathlib import Path
from requests.adapters import HTTPAdapter
from requests.packages.urllib3.util.retry import Retry
HERE = Path(__file__).parent
HERE = Path(__file__).resolve().parent
session = requests.Session()
adapter = HTTPAdapter(max_retries=Retry(5, backoff_factor=0.5))
session.mount('http://', adapter)
def apply_mappings_to_host(host: str):
@@ -20,10 +24,6 @@ def apply_mappings_to_host(host: str):
es_server = host
url = f"{es_server}/_template/{f.stem}"
session = requests.Session()
adapter = HTTPAdapter(max_retries=Retry(5, backoff_factor=0.5))
session.mount('http://', adapter)
session.delete(url)
r = session.post(
url,

View File

@@ -1,7 +1,7 @@
{
"template": "events-*",
"settings": {
"number_of_shards": 5
"number_of_shards": 1
},
"mappings": {
"_default_": {

View File

@@ -1,20 +1,25 @@
from datetime import datetime
from os import getenv
from boltons.iterutils import first
from elasticsearch import Elasticsearch, Transport
from config import config
log = config.logger(__file__)
OVERRIDE_HOST_ENV_KEY = ("ELASTIC_SERVICE_HOST", "ELASTIC_SERVICE_SERVICE_HOST")
OVERRIDE_PORT_ENV_KEY = "ELASTIC_SERVICE_PORT"
OVERRIDE_HOST_ENV_KEY = (
"TRAINS_ELASTIC_SERVICE_HOST",
"ELASTIC_SERVICE_HOST",
"ELASTIC_SERVICE_SERVICE_HOST",
)
OVERRIDE_PORT_ENV_KEY = ("TRAINS_ELASTIC_SERVICE_PORT", "ELASTIC_SERVICE_PORT")
OVERRIDE_HOST = next(filter(None, map(getenv, OVERRIDE_HOST_ENV_KEY)), None)
OVERRIDE_HOST = first(filter(None, map(getenv, OVERRIDE_HOST_ENV_KEY)))
if OVERRIDE_HOST:
log.info(f"Using override elastic host {OVERRIDE_HOST}")
OVERRIDE_PORT = getenv(OVERRIDE_PORT_ENV_KEY)
OVERRIDE_PORT = first(filter(None, map(getenv, OVERRIDE_PORT_ENV_KEY)))
if OVERRIDE_PORT:
log.info(f"Using override elastic port {OVERRIDE_PORT}")
@@ -25,6 +30,7 @@ class MissingClusterConfiguration(Exception):
"""
Exception when cluster configuration is not found in config files
"""
pass
@@ -32,6 +38,7 @@ class InvalidClusterConfiguration(Exception):
"""
Exception when cluster configuration does not contain required properties
"""
pass
@@ -46,12 +53,14 @@ def connect(cluster_name):
"""
if cluster_name not in _instances:
cluster_config = get_cluster_config(cluster_name)
hosts = cluster_config.get('hosts', None)
hosts = cluster_config.get("hosts", None)
if not hosts:
raise InvalidClusterConfiguration(cluster_name)
args = cluster_config.get('args', {})
_instances[cluster_name] = Elasticsearch(hosts=hosts, transport_class=Transport, **args)
args = cluster_config.get("args", {})
_instances[cluster_name] = Elasticsearch(
hosts=hosts, transport_class=Transport, **args
)
return _instances[cluster_name]
@@ -63,13 +72,13 @@ def get_cluster_config(cluster_name):
:return: config section for the cluster
:raises MissingClusterConfiguration: in case no config section is found for the cluster
"""
cluster_key = '.'.join(('hosts.elastic', cluster_name))
cluster_key = ".".join(("hosts.elastic", cluster_name))
cluster_config = config.get(cluster_key, None)
if not cluster_config:
raise MissingClusterConfiguration(cluster_name)
def set_host_prop(key, value):
for host in cluster_config.get('hosts', []):
for host in cluster_config.get("hosts", []):
host[key] = value
if OVERRIDE_HOST:

View File

@@ -1,6 +1,7 @@
import importlib.util
from datetime import datetime
from pathlib import Path
from uuid import uuid4
import attr
from furl import furl
@@ -10,11 +11,13 @@ from semantic_version import Version
import database.utils
from bll.queue import QueueBLL
from config import config
from config.info import get_default_company
from database import Database
from database.model.auth import Role
from database.model.auth import User as AuthUser, Credentials
from database.model.company import Company
from database.model.queue import Queue
from database.model.settings import Settings
from database.model.user import User
from database.model.version import Version as DatabaseVersion
from elastic.apply_mappings import apply_mappings_to_host
@@ -23,7 +26,7 @@ from service_repo.auth.fixed_user import FixedUser
log = config.logger(__file__)
migration_dir = (Path(__file__) / "../../migration/mongodb").resolve()
migration_dir = Path(__file__).resolve().parent / "mongo" / "migrations"
class MissingElasticConfiguration(Exception):
@@ -47,7 +50,7 @@ def init_es_data():
def _ensure_company():
company_id = config.get("apiserver.default_company")
company_id = get_default_company()
company = Company.objects(id=company_id).only("id").first()
if company:
return company_id
@@ -109,10 +112,7 @@ def _ensure_user(user: FixedUser, company_id: str):
data["email"] = f"{user.user_id}@example.com"
data["role"] = Role.user
_ensure_auth_user(
user_data=data,
company_id=company_id,
)
_ensure_auth_user(user_data=data, company_id=company_id)
given_name, _, family_name = user.name.partition(" ")
@@ -142,9 +142,7 @@ def _apply_migrations():
try:
new_scripts = {
ver: path
for ver, path in (
(Version(f.stem), f) for f in migration_dir.glob("*.py")
)
for ver, path in ((Version(f.stem), f) for f in migration_dir.glob("*.py"))
if ver > last_version
}
except ValueError as ex:
@@ -179,16 +177,30 @@ def _apply_migrations():
).save()
def _ensure_uuid():
Settings.add_value("server.uuid", str(uuid4()))
def init_mongo_data():
try:
_apply_migrations()
_ensure_uuid()
company_id = _ensure_company()
_ensure_default_queue(company_id)
users = [
{"name": "apiserver", "role": Role.system, "email": "apiserver@example.com"},
{"name": "webserver", "role": Role.system, "email": "webserver@example.com"},
{
"name": "apiserver",
"role": Role.system,
"email": "apiserver@example.com",
},
{
"name": "webserver",
"role": Role.system,
"email": "webserver@example.com",
},
{"name": "tests", "role": Role.user, "email": "tests@example.com"},
]
@@ -200,10 +212,11 @@ def init_mongo_data():
if FixedUser.enabled():
log.info("Fixed users mode is enabled")
FixedUser.validate()
for user in FixedUser.from_config():
try:
_ensure_user(user, company_id)
except Exception as ex:
log.error(f"Failed creating fixed user {user['name']}: {ex}")
log.error(f"Failed creating fixed user {user.name}: {ex}")
except Exception as ex:
log.exception("Failed initializing mongodb")

View File

@@ -0,0 +1,20 @@
import json
from pymongo.database import Database, Collection
def migrate_auth(db: Database):
collection: Collection = db["user"]
if "name_1_company_1" in [doc["name"] for doc in collection.list_indexes()]:
collection.drop_index("name_1_company_1")
def migrate_backend(db: Database):
collection: Collection = db["user"]
users = collection.find(
{"preferences": {"$exists": True, "$ne": None, "$type": "object"}}
)
for doc in users:
collection.update_one(
{"_id": doc["_id"]}, {"$set": {"preferences": json.dumps(doc["preferences"])}}
)

View File

@@ -2,21 +2,23 @@ import threading
from os import getenv
from time import sleep
from apierrors.errors.server_error import ConfigError, GeneralError
from config import config
from boltons.iterutils import first
from redis import StrictRedis
from redis.sentinel import Sentinel, SentinelConnectionPool
from apierrors.errors.server_error import ConfigError, GeneralError
from config import config
log = config.logger(__file__)
OVERRIDE_HOST_ENV_KEY = "REDIS_SERVICE_HOST"
OVERRIDE_PORT_ENV_KEY = "REDIS_SERVICE_PORT"
OVERRIDE_HOST_ENV_KEY = ("TRAINS_REDIS_SERVICE_HOST", "REDIS_SERVICE_HOST")
OVERRIDE_PORT_ENV_KEY = ("TRAINS_REDIS_SERVICE_PORT", "REDIS_SERVICE_PORT")
OVERRIDE_HOST = getenv(OVERRIDE_HOST_ENV_KEY)
OVERRIDE_HOST = first(filter(None, map(getenv, OVERRIDE_HOST_ENV_KEY)))
if OVERRIDE_HOST:
log.info(f"Using override redis host {OVERRIDE_HOST}")
OVERRIDE_PORT = getenv(OVERRIDE_PORT_ENV_KEY)
OVERRIDE_PORT = first(filter(None, map(getenv, OVERRIDE_PORT_ENV_KEY)))
if OVERRIDE_PORT:
log.info(f"Using override redis port {OVERRIDE_PORT}")

View File

@@ -3,7 +3,6 @@ Flask>=0.12.2
elasticsearch>=5.0.0,<6.0.0
pyhocon>=0.3.35
requests>=2.13.0
arrow>=0.10.0
pymongo==3.6.1 # 3.7 has a bug multiple users logged in
Flask-Cors>=3.0.5
Flask-Compress>=1.4.0
@@ -17,7 +16,6 @@ jsonschema>=2.6.0
dpath>=1.4.2
funcsigs==1.0.2
luqum>=0.7.2
typing>=3.6.4
attrs>=19.1.0
nested_dict>=1.61
related>=0.7.2
@@ -28,3 +26,4 @@ semantic_version>=2.6.0,<3
furl>=2.0.0
redis>=2.10.5
humanfriendly==4.18
psutil>=5.6.5

View File

@@ -455,7 +455,7 @@
}
batch_size {
type: integer
description: "Number of events to return each time"
description: "Number of events to return each time (default 500)"
}
event_type {
type: string

View File

@@ -324,7 +324,6 @@
required: [
uri
name
labels
]
properties {
uri {

View File

@@ -3,6 +3,25 @@ _default {
internal: true
allow_roles: ["root", "system"]
}
get_stats {
"2.1" {
description: "Get the server collected statistics."
request {
type: object
properties {
interval {
description: "The period for statistics collection in seconds."
type: long
}
}
}
response {
type: object
properties: {
}
}
}
}
config {
"2.1" {
description: "Get server configuration. Secure section is not returned."
@@ -66,3 +85,44 @@ endpoints {
}
}
}
report_stats_option {
allow_roles = [ "*" ]
"2.4" {
description: "Get or set the report statistics option per-company"
request {
type: object
properties {
enabled {
description: "If provided, sets the report statistics option (true/false)"
type: boolean
}
}
}
response {
type: object
properties {
enabled {
description: "Returns the current report stats option value"
type: boolean
}
enabled_time {
description: "If enabled, returns the time at which option was enabled"
type: string
format: date-time
}
enabled_version {
description: "If enabled, returns the server version at the time option was enabled"
type: string
}
enabled_user {
description: "If enabled, returns Id of the user who enabled the option"
type: string
}
current_version {
description: "Returns the current server version"
type: string
}
}
}
}
}

View File

@@ -550,6 +550,60 @@ get_all {
}
}
}
clone {
"2.5" {
description: "Clone an existing task"
request {
type: object
required: [ task ]
properties {
task {
description: "ID of the task"
type: string
}
new_task_name {
description: "The name of the cloned task. If not provided then taken from the original task"
type: string
}
new_task_comment {
description: "The comment of the cloned task. If not provided then taken from the original task"
type: string
}
new_task_tags {
description: "The user-defined tags of the cloned task. If not provided then taken from the original task"
type: array
items { type: string }
}
new_task_system_tags {
description: "The system tags of the cloned task. If not provided then empty"
type: array
items { type: string }
}
new_task_parent {
description: "The parent of the cloned task. If not provided then taken from the original task"
type: string
}
new_task_project {
description: "The project of the cloned task. If not provided then taken from the original task"
type: string
}
execution_overrides {
description: "The execution params for the cloned task. The params not specified are taken from the original task"
"$ref": "#/definitions/execution"
}
}
}
response {
type: object
properties {
id {
description: "ID of the new task"
type: string
}
}
}
}
}
create {
"2.1" {
description: "Create a new task"
@@ -1304,4 +1358,40 @@ ping {
additionalProperties: false
}
}
}
add_or_update_artifacts {
"2.6" {
description: """ Update an existing artifact (search by key/mode) or add a new one """
request {
type: object
required: [ task, artifacts ]
properties {
task {
description: "Task ID"
type: string
}
artifacts {
description: "Artifacts to add or update"
type: array
items { "$ref": "#/definitions/artifact" }
}
}
}
response {
type: object
properties {
added {
description: "Keys of artifacts added"
type: array
items { type: string }
}
updated {
description: "Keys of artifacts updated"
type: array
items { type: string }
}
}
}
}
}

View File

@@ -1,3 +1,4 @@
import atexit
from argparse import ArgumentParser
from flask import Flask, request, Response
@@ -7,15 +8,16 @@ from werkzeug.exceptions import BadRequest
import database
from apierrors.base import BaseError
from bll.statistics.stats_reporter import StatisticsReporter
from config import config
from init_data import init_es_data, init_mongo_data
from service_repo import ServiceRepo, APICall
from service_repo.auth import AuthType
from service_repo.errors import PathParsingError
from timing_context import TimingContext
from utilities import json
from init_data import init_es_data, init_mongo_data
from updates import check_updates_thread
from utilities import json
from utilities.threads_manager import ThreadsManager
app = Flask(__name__, static_url_path="/static")
CORS(app, **config.get("apiserver.cors"))
@@ -38,6 +40,14 @@ log.info(f"Exposed Services: {' '.join(ServiceRepo.endpoint_names())}")
check_updates_thread.start()
StatisticsReporter.start()
def graceful_shutdown():
ThreadsManager.terminating = True
atexit.register(graceful_shutdown)
@app.before_first_request
@@ -57,7 +67,9 @@ def before_request():
content, content_type = ServiceRepo.handle_call(call)
headers = {}
if call.result.filename:
headers["Content-Disposition"] = f"attachment; filename={call.result.filename}"
headers[
"Content-Disposition"
] = f"attachment; filename={call.result.filename}"
if call.result.headers:
headers.update(call.result.headers)
@@ -71,7 +83,9 @@ def before_request():
if value is None:
response.set_cookie(key, "", expires=0)
else:
response.set_cookie(key, value, **config.get("apiserver.auth.cookies"))
response.set_cookie(
key, value, **config.get("apiserver.auth.cookies")
)
return response
except Exception as ex:

View File

@@ -21,6 +21,8 @@ JSON_CONTENT_TYPE = "application/json"
class DataContainer(object):
""" Data container that supports raw data (dict or a list of batched dicts) and a data model """
null_schema_validator: SchemaValidator = SchemaValidator(None)
def __init__(self, data=None, batched_data=None):
if data and batched_data:
raise ValueError("data and batched data are not supported simultaneously")
@@ -28,7 +30,7 @@ class DataContainer(object):
self._data = None
self._data_model = None
self._data_model_cls = None
self._schema_validator: SchemaValidator = SchemaValidator(None)
self._schema_validator: SchemaValidator = self.null_schema_validator
# use setter to properly initialize data
self.data = data
self.batched_data = batched_data
@@ -255,6 +257,7 @@ class MissingIdentity(Exception):
class APICall(DataContainer):
HEADER_AUTHORIZATION = "Authorization"
HEADER_REAL_IP = "X-Real-IP"
HEADER_FORWARDED_FOR = "X-Forwarded-For"
""" Standard headers """
_transaction_headers = ("X-Trains-Trx",)
@@ -382,8 +385,13 @@ class APICall(DataContainer):
@property
def real_ip(self):
real_ip = self.get_header(self.HEADER_REAL_IP)
return real_ip or self._remote_addr or "untrackable"
""" Obtain visitor's IP address """
return (
self.get_header(self.HEADER_FORWARDED_FOR)
or self.get_header(self.HEADER_REAL_IP)
or self._remote_addr
or "untrackable"
)
@property
def failed(self):

View File

@@ -5,27 +5,45 @@ from typing import Sequence, TypeVar
import attr
from config import config
from config.info import get_default_company
T = TypeVar("T", bound="FixedUser")
class FixedUsersError(Exception):
pass
@attr.s(auto_attribs=True)
class FixedUser:
username: str
password: str
name: str
company: str = get_default_company()
def __attrs_post_init__(self):
self.user_id = hashlib.md5(f"{self.username}:{self.password}".encode()).hexdigest()
self.user_id = hashlib.md5(f"{self.company}:{self.username}".encode()).hexdigest()
@classmethod
def enabled(cls):
return config.get("apiserver.auth.fixed_users.enabled", False)
@classmethod
def validate(cls):
if not cls.enabled():
return
users = cls.from_config()
if len({user.username for user in users}) < len(users):
raise FixedUsersError(
"Duplicate user names found in fixed users configuration"
)
@classmethod
@lru_cache()
def from_config(cls) -> Sequence[T]:
return [cls(**user) for user in config.get("apiserver.auth.fixed_users.users", [])]
return [
cls(**user) for user in config.get("apiserver.auth.fixed_users.users", [])
]
@classmethod
@lru_cache()

View File

@@ -1,5 +1,6 @@
from enum import Enum
from typing import Callable, Sequence, Text
from boltons.iterutils import remap
from jsonmodels import models
from jsonmodels.errors import FieldNotSupported
@@ -87,7 +88,14 @@ class Endpoint(object):
Provided data_model schema if available
"""
try:
return data_model.to_json_schema()
res = data_model.to_json_schema()
def visit(path, key, value):
if isinstance(value, Enum):
value = str(value)
return key, value
return remap(res, visit=visit)
except (FieldNotSupported, TypeError):
return str(data_model.__name__)

View File

@@ -34,7 +34,7 @@ class ServiceRepo(object):
"""If the check is set, parsing will fail for endpoint request with the version that is grater than the current
maximum """
_max_version = PartialVersion("2.4")
_max_version = PartialVersion("2.6")
""" Maximum version number (the highest min_version value across all endpoints) """
_endpoint_exp = (

View File

@@ -211,7 +211,7 @@ def vector_metrics_iter_histogram(call, company_id, req_model):
@endpoint("events.get_task_events", required_fields=["task"])
def get_task_events(call, company_id, _):
task_id = call.data["task"]
batch_size = call.data.get("batch_size")
batch_size = call.data.get("batch_size", 500)
event_type = call.data.get("event_type")
scroll_id = call.data.get("scroll_id")
order = call.data.get("order") or "asc"
@@ -394,7 +394,7 @@ def get_task_plots_v1_7(call, company_id, req_model):
task_bll.assert_exists(call.identity.company, task_id, allow_public=True)
# events, next_scroll_id, total_events = event_bll.get_task_events(
# company_id, task_id,
# company, task_id,
# event_type="plot",
# sort=[{"iter": {"order": "desc"}}],
# last_iter_count=iters,
@@ -453,7 +453,7 @@ def get_debug_images_v1_7(call, company_id, req_model):
task_bll.assert_exists(call.identity.company, task_id, allow_public=True)
# events, next_scroll_id, total_events = event_bll.get_task_events(
# company_id, task_id,
# company, task_id,
# event_type="training_debug_image",
# sort=[{"iter": {"order": "desc"}}],
# last_iter_count=iters,

View File

@@ -1,10 +1,25 @@
from datetime import datetime
from pyhocon.config_tree import NoneValue
from apierrors import errors
from apimodels.server import ReportStatsOptionRequest, ReportStatsOptionResponse
from bll.statistics.stats_reporter import StatisticsReporter
from config import config
from config.info import get_version, get_build_number, get_commit_number
from database.errors import translate_errors_context
from database.model import Company
from database.model.company import ReportStatsOption
from service_repo import ServiceRepo, APICall, endpoint
@endpoint("server.get_stats")
def get_stats(call: APICall):
call.result.data = StatisticsReporter.get_statistics(
company_id=call.identity.company
)
@endpoint("server.config")
def get_config(call: APICall):
path = call.data.get("path")
@@ -43,3 +58,36 @@ def info(call: APICall):
"build": get_build_number(),
"commit": get_commit_number(),
}
@endpoint(
"server.report_stats_option",
request_data_model=ReportStatsOptionRequest,
response_data_model=ReportStatsOptionResponse,
)
def report_stats(call: APICall, company: str, request: ReportStatsOptionRequest):
if not StatisticsReporter.supported:
result = ReportStatsOptionResponse(supported=False)
else:
enabled = request.enabled
with translate_errors_context():
query = Company.objects(id=company)
if enabled is None:
stats_option = query.first().defaults.stats_option
else:
stats_option = ReportStatsOption(
enabled=enabled,
enabled_time=datetime.utcnow(),
enabled_version=get_version(),
enabled_user=call.identity.user,
)
updated = query.update(defaults__stats_option=stats_option)
if not updated:
raise errors.server_error.InternalError(
f"Failed setting report_stats to {enabled}"
)
data = stats_option.to_mongo()
data["current_version"] = get_version()
result = ReportStatsOptionResponse(**data)
call.result.data_model = result

View File

@@ -1,18 +1,17 @@
from copy import deepcopy
from datetime import datetime
from operator import attrgetter
from typing import Sequence, Callable, Type, TypeVar
from typing import Sequence, Callable, Type, TypeVar, Union
import attr
import dpath
import mongoengine
import six
from mongoengine import EmbeddedDocument, Q
from mongoengine.queryset.transform import COMPARISON_OPERATORS
from pymongo import UpdateOne
from apierrors import errors, APIError
from apimodels.base import UpdateResponse
from apimodels.base import UpdateResponse, IdResponse
from apimodels.tasks import (
StartedResponse,
ResetResponse,
@@ -27,10 +26,19 @@ from apimodels.tasks import (
EnqueueRequest,
EnqueueResponse,
DequeueResponse,
CloneRequest,
AddOrUpdateArtifactsRequest,
AddOrUpdateArtifactsResponse,
)
from bll.event import EventBLL
from bll.queue import QueueBLL
from bll.task import TaskBLL, ChangeStatusRequest, update_project_time, split_by
from bll.task import (
TaskBLL,
ChangeStatusRequest,
update_project_time,
split_by,
ParameterKeyEscaper,
)
from bll.util import SetFieldsResolver
from database.errors import translate_errors_context
from database.model.model import Model
@@ -94,13 +102,37 @@ def get_by_id(call: APICall, company_id, req_model: TaskRequest):
req_model.task, company_id=company_id, allow_public=True
)
task_dict = task.to_proper_dict()
conform_output_tags(call, task_dict)
unprepare_from_saved(call, task_dict)
call.result.data = {"task": task_dict}
def escape_execution_parameters(call: APICall):
default_prefix = "execution.parameters."
def escape_paths(paths, prefix=default_prefix):
return [
prefix + ParameterKeyEscaper.escape(path[len(prefix) :])
if path.startswith(prefix)
else path
for path in paths
]
projection = Task.get_projection(call.data)
if projection:
Task.set_projection(call.data, escape_paths(projection))
ordering = Task.get_ordering(call.data)
if ordering:
ordering = Task.set_ordering(call.data, escape_paths(ordering, default_prefix))
Task.set_ordering(call.data, escape_paths(ordering, "-" + default_prefix))
@endpoint("tasks.get_all_ex", required_fields=[])
def get_all_ex(call: APICall):
conform_tag_fields(call, call.data)
escape_execution_parameters(call)
with translate_errors_context():
with TimingContext("mongo", "task_get_all_ex"):
tasks = Task.get_many_with_join(
@@ -109,13 +141,16 @@ def get_all_ex(call: APICall):
query_options=get_all_query_options,
allow_public=True, # required in case projection is requested for public dataset/versions
)
conform_output_tags(call, tasks)
unprepare_from_saved(call, tasks)
call.result.data = {"tasks": tasks}
@endpoint("tasks.get_all", required_fields=[])
def get_all(call: APICall):
conform_tag_fields(call, call.data)
escape_execution_parameters(call)
with translate_errors_context():
with TimingContext("mongo", "task_get_all"):
tasks = Task.get_many(
@@ -125,7 +160,7 @@ def get_all(call: APICall):
query_options=get_all_query_options,
allow_public=True, # required in case projection is requested for public dataset/versions
)
conform_output_tags(call, tasks)
unprepare_from_saved(call, tasks)
call.result.data = {"tasks": tasks}
@@ -220,6 +255,45 @@ create_fields = {
}
def prepare_for_save(call: APICall, fields: dict):
conform_tag_fields(call, fields)
# Strip all script fields (remove leading and trailing whitespace chars) to avoid unusable names and paths
for field in task_script_fields:
try:
path = f"script/{field}"
value = dpath.get(fields, path)
if isinstance(value, str):
value = value.strip()
dpath.set(fields, path, value)
except KeyError:
pass
parameters = safe_get(fields, "execution/parameters")
if parameters is not None:
# Escape keys to make them mongo-safe
parameters = {ParameterKeyEscaper.escape(k): v for k, v in parameters.items()}
dpath.set(fields, "execution/parameters", parameters)
return fields
def unprepare_from_saved(call: APICall, tasks_data: Union[Sequence[dict], dict]):
if isinstance(tasks_data, dict):
tasks_data = [tasks_data]
conform_output_tags(call, tasks_data)
for task_data in tasks_data:
parameters = safe_get(task_data, "execution/parameters")
if parameters is not None:
# Escape keys to make them mongo-safe
parameters = {
ParameterKeyEscaper.unescape(k): v for k, v in parameters.items()
}
dpath.set(task_data, "execution/parameters", parameters)
def prepare_create_fields(
call: APICall, valid_fields=None, output=None, previous_task: Task = None
):
@@ -239,25 +313,7 @@ def prepare_create_fields(
output = Output(destination=output_dest)
fields["output"] = output
conform_tag_fields(call, fields)
# Strip all script fields (remove leading and trailing whitespace chars) to avoid unusable names and paths
for field in task_script_fields:
try:
path = "script/%s" % field
value = dpath.get(fields, path)
if isinstance(value, six.string_types):
value = value.strip()
dpath.set(fields, path, value)
except KeyError:
pass
parameters = safe_get(fields, "execution/parameters")
if parameters is not None:
parameters = {k.strip(): v for k, v in parameters.items()}
dpath.set(fields, "execution/parameters", parameters)
return fields
return prepare_for_save(call, fields)
def _validate_and_get_task_from_call(call: APICall, **kwargs):
@@ -278,7 +334,9 @@ def validate(call: APICall, company_id, req_model: CreateRequest):
_validate_and_get_task_from_call(call)
@endpoint("tasks.create", request_data_model=CreateRequest)
@endpoint(
"tasks.create", request_data_model=CreateRequest, response_data_model=IdResponse
)
def create(call: APICall, company_id, req_model: CreateRequest):
task = _validate_and_get_task_from_call(call)
@@ -286,7 +344,26 @@ def create(call: APICall, company_id, req_model: CreateRequest):
task.save()
update_project_time(task.project)
call.result.data = {"id": task.id}
call.result.data_model = IdResponse(id=task.id)
@endpoint(
"tasks.clone", request_data_model=CloneRequest, response_data_model=IdResponse
)
def clone_task(call: APICall, company_id, request: CloneRequest):
task = task_bll.clone_task(
company_id=company_id,
user_id=call.identity.user,
task_id=request.task,
name=request.new_task_name,
comment=request.new_task_comment,
parent=request.new_task_parent,
project=request.new_task_project,
tags=request.new_task_tags,
system_tags=request.new_task_system_tags,
execution_overrides=request.execution_overrides,
)
call.result.data_model = IdResponse(id=task.id)
def prepare_update_fields(call: APICall, task, call_data):
@@ -296,8 +373,7 @@ def prepare_update_fields(call: APICall, task, call_data):
t_fields = task_fields
t_fields.add("output__error")
fields = parse_from_call(call_data, update_fields, t_fields)
conform_tag_fields(call, fields)
return fields, valid_fields
return prepare_for_save(call, fields), valid_fields
@endpoint(
@@ -324,7 +400,7 @@ def update(call: APICall, company_id, req_model: UpdateRequest):
)
update_project_time(updated_fields.get("project"))
conform_output_tags(call, updated_fields)
unprepare_from_saved(call, updated_fields)
return UpdateResponse(updated=updated_count, fields=updated_fields)
@@ -449,7 +525,7 @@ def edit(call: APICall, company_id, req_model: UpdateRequest):
fixed_fields.update(last_update=now)
updated = task.update(upsert=False, **fixed_fields)
update_project_time(fields.get("project"))
conform_output_tags(call, fields)
unprepare_from_saved(call, fields)
call.result.data_model = UpdateResponse(updated=updated, fields=fields)
else:
call.result.data_model = UpdateResponse(updated=0)
@@ -702,7 +778,7 @@ def cleanup_task(task, force=False):
else:
updated_models = 0
event_bll.delete_task_events(task.company, task.id)
event_bll.delete_task_events(task.company, task.id, allow_locked=force)
return CleanupResult(
deleted_models=deleted_models,
@@ -837,3 +913,18 @@ def ping(_, company_id, request: PingRequest):
TaskBLL.set_last_update(
task_ids=[request.task], company_id=company_id, last_update=datetime.utcnow()
)
@endpoint(
"tasks.add_or_update_artifacts",
min_version="2.6",
request_data_model=AddOrUpdateArtifactsRequest,
response_data_model=AddOrUpdateArtifactsResponse,
)
def add_or_update_artifacts(
call: APICall, company_id, request: AddOrUpdateArtifactsRequest
):
added, updated = TaskBLL.add_or_update_artifacts(
task_id=request.task, company_id=company_id, artifacts=request.artifacts
)
call.result.data_model = AddOrUpdateArtifactsResponse(added=added, updated=updated)

View File

@@ -7,10 +7,7 @@ from mongoengine import Q
from apierrors import errors
from apimodels.base import UpdateResponse
from apimodels.users import (
CreateRequest,
SetPreferencesRequest,
)
from apimodels.users import CreateRequest, SetPreferencesRequest
from bll.user import UserBLL
from config import config
from database.errors import translate_errors_context
@@ -19,6 +16,7 @@ from database.model.company import Company
from database.model.user import User
from database.utils import parse_from_call
from service_repo import APICall, endpoint
from utilities.json import loads, dumps
log = config.logger(__file__)
get_all_query_options = User.QueryParameterOptions(list_fields=("id",))
@@ -160,7 +158,10 @@ def update(call, company_id, _):
def get_user_preferences(call):
user_id = call.identity.user
return get_user(call, user_id, ["preferences"]).get("preferences", {})
preferences = get_user(call, user_id, ["preferences"]).get("preferences")
if preferences and isinstance(preferences, str):
preferences = loads(preferences)
return preferences or {}
@endpoint("users.get_preferences")
@@ -169,9 +170,7 @@ def get_preferences(call):
return {"preferences": get_user_preferences(call)}
@endpoint(
"users.set_preferences", request_data_model=SetPreferencesRequest
)
@endpoint("users.set_preferences", request_data_model=SetPreferencesRequest)
def set_preferences(call, company_id, req_model):
# type: (APICall, str, SetPreferencesRequest) -> Dict
assert isinstance(call, APICall)
@@ -205,9 +204,11 @@ def set_preferences(call, company_id, req_model):
updated, fields = 0, {}
else:
with translate_errors_context("updating user preferences"):
fields = dict(preferences=new_preferences)
updated = User.objects(id=call.identity.user, company=company_id).update(
upsert=False, **fields
upsert=False, preferences=dumps(new_preferences)
)
return {"updated": updated, "fields": fields if updated else {}}
return {
"updated": updated,
"fields": {"preferences": new_preferences} if updated else {},
}

View File

@@ -52,7 +52,7 @@ class TestEntityOrdering(TestService):
def _get_page_tasks(self, order_by, page: int, page_size: int) -> Sequence:
return self.api.tasks.get_all_ex(
only_fields=self.only_fields,
order_by=order_by,
order_by=[order_by] if order_by else None,
comment=self.test_comment,
page=page,
page_size=page_size,
@@ -79,7 +79,7 @@ class TestEntityOrdering(TestService):
def _assertGetTasksWithOrdering(self, order_by: str = None, **kwargs):
tasks = self.api.tasks.get_all_ex(
only_fields=self.only_fields,
order_by=order_by,
order_by=[order_by] if order_by else None,
comment=self.test_comment,
**kwargs,
).tasks

View File

@@ -6,6 +6,9 @@ log = config.logger(__file__)
class TestTasksEdit(TestService):
def setUp(self, **kwargs):
super().setUp(version=2.5)
def new_task(self, **kwargs):
return self.create_temp(
"tasks", type="testing", name="test", input=dict(view=dict()), **kwargs
@@ -34,3 +37,39 @@ class TestTasksEdit(TestService):
self.api.models.edit(model=not_ready_model, ready=False)
self.assertFalse(self.api.models.get_by_id(model=not_ready_model).model.ready)
self.api.tasks.edit(task=task, execution=dict(model=not_ready_model))
def test_clone_task(self):
script = dict(
binary="python",
requirements=dict(pip=["six"]),
repository="https://example.come/foo/bar",
entry_point="test.py",
diff="foo",
)
execution = dict(parameters=dict(test="Test"))
tags = ["hello"]
system_tags = ["development", "test"]
task = self.new_task(
script=script, execution=execution, tags=tags, system_tags=system_tags
)
new_name = "new test"
new_tags = ["by"]
execution_overrides = dict(framework="Caffe")
new_task_id = self.api.tasks.clone(
task=task,
new_task_name=new_name,
new_task_tags=new_tags,
execution_overrides=execution_overrides,
new_task_parent=task,
).id
new_task = self.api.tasks.get_by_id(task=new_task_id).task
self.assertEqual(new_task.name, new_name)
self.assertEqual(new_task.type, "testing")
self.assertEqual(new_task.tags, new_tags)
self.assertEqual(new_task.status, "created")
self.assertEqual(new_task.script, script)
self.assertEqual(new_task.parent, task)
self.assertEqual(new_task.execution.parameters, execution["parameters"])
self.assertEqual(new_task.execution.framework, execution_overrides["framework"])
self.assertEqual(new_task.system_tags, [])

View File

@@ -183,12 +183,13 @@ class TestWorkersService(TestService):
# run on an empty es db since we have no way
# to pass non existing workers to this api
# res = self.api.workers.get_activity_report(
# from_date=from_date.timestamp(),
# to_date=to_date.timestamp(),
# from_timestamp=from_timestamp.timestamp(),
# to_timestamp=to_timestamp.timestamp(),
# interval=20,
# )
self._simulate_workers()
to_date = utc_now_tz_aware()
from_date = to_date - timedelta(minutes=10)

View File

@@ -1 +1,2 @@
numpy>=1.12.1
nose==1.3.7
parameterized>=0.7.1

View File

@@ -8,7 +8,9 @@ import requests
from semantic_version import Version
from config import config
from version import __version__ as current_version
from config.info import get_version
from database.model.settings import Settings
from utilities.threads_manager import ThreadsManager
log = config.logger(__name__)
@@ -39,12 +41,15 @@ class CheckUpdatesThread(Thread):
def _check_new_version_available(self) -> Optional[_VersionResponse]:
url = config.get(
"apiserver.check_for_updates.url", "https://updates.trains.allegro.ai/updates"
"apiserver.check_for_updates.url",
"https://updates.trains.allegro.ai/updates",
)
uid = Settings.get_by_key("server.uuid")
response = requests.get(
url,
json={"versions": {self.component_name: str(current_version)}},
json={"versions": {self.component_name: str(get_version())}, "uid": uid},
timeout=float(
config.get("apiserver.check_for_updates.request_timeout_sec", 3.0)
),
@@ -61,7 +66,7 @@ class CheckUpdatesThread(Thread):
if not latest_version:
return
cur_version = Version(current_version)
cur_version = Version(get_version())
latest_version = Version(latest_version)
if cur_version >= latest_version:
return
@@ -76,7 +81,16 @@ class CheckUpdatesThread(Thread):
)
def _check_updates(self):
while True:
update_interval_sec = max(
float(
config.get(
"apiserver.check_for_updates.check_interval_sec",
60 * 60 * 24,
)
),
60 * 5,
)
while not ThreadsManager.terminating:
# noinspection PyBroadException
try:
response = self._check_new_version_available()
@@ -94,17 +108,7 @@ class CheckUpdatesThread(Thread):
except Exception:
log.exception("Failed obtaining updates")
sleep(
max(
float(
config.get(
"apiserver.check_for_updates.check_interval_sec",
60 * 60 * 24,
)
),
60 * 5,
)
)
sleep(update_interval_sec)
check_updates_thread = CheckUpdatesThread()

View File

@@ -12,6 +12,24 @@ def flatten_nested_items(
for key, value in dictionary.items():
path = prefix + (key,)
if isinstance(value, dict) and nesting != 0:
yield from flatten_nested_items(value, next_nesting, include_leaves, prefix=path)
yield from flatten_nested_items(
value, next_nesting, include_leaves, prefix=path
)
elif include_leaves is None or key in include_leaves:
yield path, value
def deep_merge(source: dict, override: dict) -> dict:
"""
Merge the override dict into the source in-place
Contrary to the dpath.merge the sequences are not expanded
If override contains the sequence with the same name as source
then the whole sequence in the source is overridden
"""
for key, value in override.items():
if key in source and isinstance(source[key], dict) and isinstance(value, dict):
deep_merge(source[key], value)
else:
source[key] = value
return source

View File

@@ -1,13 +1,30 @@
from functools import wraps
from threading import Lock, Thread
import attr
from typing import ClassVar
@attr.s(auto_attribs=True)
class ThreadsManager:
objects = {}
lock = Lock()
terminating: ClassVar[bool] = False
def __init__(self, name=None, **threads):
super(ThreadsManager, self).__init__()
self.name = name or self.__class__.name
self.objects = {}
self.lock = Lock()
for thread_name, thread in threads.items():
if issubclass(thread, Thread):
thread = thread()
thread.start()
elif isinstance(thread, Thread):
if not thread.is_alive():
thread.start()
else:
raise Exception(f"Expected thread or thread class ({thread_name}): {thread}")
self.objects[thread_name] = thread
def register(self, thread_name, daemon=True):
def decorator(f):
@@ -17,7 +34,7 @@ class ThreadsManager:
thread = self.objects.get(thread_name)
if not thread:
thread = Thread(
target=f, name=thread_name, args=args, kwargs=kwargs
target=f, name=f"{self.name}_{thread_name}", args=args, kwargs=kwargs
)
thread.daemon = daemon
thread.start()
@@ -27,3 +44,13 @@ class ThreadsManager:
return wrapper
return decorator
def __getattr__(self, item):
if item in self.objects:
return self.objects[item]
return self.__getattribute__(item)
def __getitem__(self, item):
if item in self.objects:
return self.objects[item]
raise KeyError(item)

View File

@@ -1 +1 @@
__version__ = "0.12.0"
__version__ = "0.13.0"

View File

@@ -2,13 +2,13 @@
## Introduction
The webserver is the **trains-server**'s component responsible for serving the TRAINS webapp.
The webserver is the **trains-server**'s component responsible for serving the Trains webapp.
For this purpose, we use an [NGINX](https://www.nginx.com/) server.
## Configuration
In order to serve the TRAINS webapp, the following is required:
* The pre-built TRAINS webapp should be copied to the NGINX html directory (usually `/usr/share/nginx/html`)
In order to serve the Trains webapp, the following is required:
* The pre-built Trains webapp should be copied to the NGINX html directory (usually `/usr/share/nginx/html`)
* The default NGINX port (usually `80`) should be changed to match the **trains-server** configuration (usually `8080`)
NOTE: This configuration may vary in different systems, depending on the NGINX version and distribution used.