The profile rework left references to the old entry modes behind. Renames
the user patch-layer API and its spec file (watchPersonalPatches ->
watchUserPatches, personal-config.spec.ts -> user-patches.spec.ts) and
retargets the prose that still named `config.yaml`, `--config`, raw-config
mode, and surface overlays: repository-plugin and mcp-memory READMEs, the
credentials-local anchor into app-boot, vendor manifest items 12-13, the
vendored include/hmr comments, and install.sh.
Restores the boot-failure guard the rework dropped with raw mode: the
built-bin case now boots `--profile web --patch <invalid>` and asserts the
settled diagnostic and exit 1, so the HMR initial-scan deadlock stays
covered; its orphaned raw fixture is renamed and the unused one deleted.
The superseded personal-config Agent Note and its superseding profile note
are now cross-linked.
dsh --profile <name> replaces the fixed entry modes: --config and -p are
removed, --patch adds overlays over the composed profile, a positional task
selects one-shot mode (requires the headless-runner row), and dsh web stays as
the alias for --profile web carrying the Web flag family as patches. dsh
plugin --profile <name> forwards verbatim to pnpm in the profile directory,
initializes on first use, and reconciles the dsh.plugins layer list after
add/remove (patch-less packages warn and stay plain dependencies). Config
dumps and the keyless web e2e scaffold compose the same bundle layers over the
same empty root as the boot.
