Merge remote-tracking branch 'origin/master' into codex/project-instruction-files

# Conflicts:
#	AGENTS.md
#	docs/config-catalog.md
#	docs/cordis-catalog/events.md
#	docs/cordis-catalog/services.md
#	docs/core-data-structures/core.md
#	docs/event-producer-consumer.md
#	docs/persistence-catalog.md
#	docs/rfc/implemented/architecture/2026-07-05-reconstructable-requests.md
#	docs/rfc/implemented/feature/2026-06-15-code-mode.md
#	docs/rfc/implemented/feature/2026-06-30-hook-bridges.md
#	docs/rfc/implemented/feature/2026-06-30-interception-seams.md
#	docs/rfc/implemented/feature/2026-07-08-repeat-tool-guard.md
#	docs/rfc/proposed/simplification/2026-07-04-prune-dead-core-spine-surface.md
#	examples/AGENTS.md
#	examples/acp-agent/cordis.yml
#	examples/acp-agent/tests/acp.snapshot.ts
#	examples/echo-agent/cordis.yml
#	examples/sandbox-acp-agent/cordis.yml
#	packages/cordis/tool-cordis/src/api-catalog.ts
#	packages/core/agent-core/README.md
#	packages/core/agent-core/src/index.ts
#	packages/core/agent-loop/README.md
#	packages/core/agent-loop/src/loop.ts
#	packages/core/agent-loop/tests/interception.spec.ts
#	packages/core/agent/src/types.ts
#	packages/core/tools/README.md
#	packages/core/tools/src/code-mode.ts
#	packages/core/tools/src/index.ts
#	packages/fs/fs-local/src/index.ts
#	packages/fs/fs/README.md
#	packages/fs/fs/src/index.ts
#	packages/guard/repeat-tool-guard/README.md
#	packages/guard/repeat-tool-guard/src/index.ts
#	packages/hooks/hooks-claude/src/index.ts
#	packages/hooks/hooks-codex/src/index.ts
#	packages/ui/acp-agent/src/index.ts

python/sdk-runtime/src/deepseek_harness_runtime/runtime/cordis.yml

@@ -0,0 +1,44 @@
+# Bundled default config. The runtime still requires an explicit
+# $DSH_CORDIS_CONFIG or argv path; the SDK injects this path for bundled
+# zero-config launches. SDK-set session-root and cwd variables have manual-run fallbacks.
+
+# Stdio JSON-RPC serving surface; without it the agent has no SDK client.
+- id: jsonrpc
+  name: '@deepseek-ai/dsh-jsonrpc'
+
+# Agent spine; the SDK server creates agents per sessionId.
+- id: agent-core
+  name: '@deepseek-ai/dsh-agent-core'
+  config:
+    workspaceContext:
+      maxBytes: 65536
+
+# Stock DeepSeek adapters. Loading requires an API key; initialize and shutdown
+# may use a dummy key because they do not call the model.
+- id: llm-deepseek
+  name: '@deepseek-ai/dsh-llm-deepseek'
+  config:
+    apiKey: !!js process.env.DEEPSEEK_API_KEY
+    baseURL: !!js process.env.DEEPSEEK_BASE_URL
+    models:
+      - deepseek-v4-flash
+      - deepseek-v4-pro
+
+# JSONL persistence; $DSH_SESSION_ROOT wins over ./.sessions in the process cwd.
+- id: sessions
+  name: '@deepseek-ai/dsh-session-persistence-jsonl'
+  config:
+    root: !!js process.env.DSH_SESSION_ROOT ?? './.sessions'
+
+# Local bash executor; $DSH_CWD wins over the process cwd.
+- id: bash
+  name: '@deepseek-ai/dsh-bash-local'
+  config:
+    cwd: !!js process.env.DSH_CWD ?? process.cwd()
+
+# Local filesystem provider for workspace instruction loading. This does not
+# expose model-facing file tools by itself.
+- id: fs-local
+  name: '@deepseek-ai/dsh-fs-local'
+  config:
+    cwd: !!js process.env.DSH_CWD ?? process.cwd()