Merge remote-tracking branch 'origin/master' into codex/project-instruction-files

# Conflicts:
#	docs/config-catalog.md
#	docs/cordis-catalog/services.md
#	docs/event-producer-consumer.md
#	docs/module-graph.md
#	packages/README.md
#	packages/cordis/tool-cordis/src/api-catalog.ts
#	packages/core/tools/README.md
#	packages/core/tools/src/index.ts
#	packages/ui/stdio-agent/tests/built-bin.e2e.ts

packages/core/agent-loop/src/loop.ts

@@ -583,7 +583,8 @@ async function runStep(
     })
     session.append('tool/result', {
       turn, step,
-      // Preserve transcript pairing even if a post-execute listener returns another id.
+      // Correlation comes from the immutable execution input; the result does
+      // not duplicate this authoritative transcript identity.
       callId: call.id,
       content: result.content,
       isError: result.isError,