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https://github.com/deepseek-ai/deepseek-harness
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Merge remote-tracking branch 'origin/master' into codex/agent-session-jsonl-location
# Conflicts: # docs/config-catalog.md # docs/cordis-catalog/services.md # docs/core-data-structures/bash.md # docs/module-graph.md # docs/rfc/INDEX.md # docs/rfc/implemented/architecture/2026-06-30-bash-stdin-env-trusted-plugin-surface.md # docs/rfc/implemented/feature/2026-06-30-hook-bridges.md # examples/acp-agent/tests/snapshots/advanced-toolchain/session.1.jsonl # examples/acp-agent/tests/snapshots/advanced-toolchain/session.2.jsonl # examples/acp-agent/tests/snapshots/advanced-toolchain/session.jsonl # examples/acp-agent/tests/snapshots/advanced-toolchain/system-prompt.golden.md # examples/acp-agent/tests/snapshots/both-mode-turn/session.jsonl # examples/acp-agent/tests/snapshots/both-mode-turn/system-prompt.golden.md # examples/acp-agent/tests/snapshots/code-mode-turn/system-prompt.golden.md # examples/acp-agent/tests/snapshots/skill-load/session.jsonl # examples/acp-agent/tests/snapshots/text-turn/session.jsonl # examples/sandbox-acp-agent/tests/snapshots/mode-switching/session.jsonl # packages/bash/bash-local/README.md # packages/bash/bash-local/src/run.ts # packages/bash/bash-local/tests/run.spec.ts # packages/bash/bash/README.md # packages/bash/tool-bash/README.md # packages/bash/tool-bash/src/index.ts # packages/bash/tool-bash/tests/tools.spec.ts # packages/cordis/tool-cordis/src/api-catalog.ts # packages/core/agent-core/src/index.ts # packages/session-persistence/session-persistence-jsonl/src/index.ts # packages/session-persistence/session-persistence-sqlite/src/index.ts # packages/session-persistence/session-persistence/README.md # packages/session-persistence/session-persistence/src/index.ts # packages/ui/acp-agent/README.md # packages/ui/stdio-agent/README.md
This commit is contained in:
Yichen Jiang
@@ -83,6 +83,9 @@ flowchart TD
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pkg_session_persistence_jsonl["session-persistence-jsonl"]
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pkg_session_persistence_sqlite["session-persistence-sqlite"]
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end
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subgraph group_session_query["packages/session-query"]
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pkg_session_query["session-query"]
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end
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subgraph group_support["packages/support"]
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pkg_acp_snapshot["acp-snapshot"]
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pkg_invariants["invariants"]
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@@ -95,6 +98,7 @@ flowchart TD
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pkg_app_boot["app-boot"]
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pkg_jsonrpc["jsonrpc"]
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pkg_jsonrpc_agent["jsonrpc-agent"]
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pkg_permission["permission"]
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pkg_stdio_agent["stdio-agent"]
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pkg_tool_ask_user["tool-ask-user"]
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pkg_user_approval["user-approval"]
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@@ -166,6 +170,9 @@ flowchart TD
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pkg_session_persistence_jsonl --> pkg_session_persistence
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pkg_session_persistence_sqlite --> pkg_session
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pkg_session_persistence_sqlite --> pkg_session_persistence
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pkg_session_query --> pkg_llm
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pkg_session_query --> pkg_session
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pkg_session_query --> pkg_session_persistence
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pkg_invariants --> pkg_agent
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pkg_invariants --> pkg_llm
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pkg_invariants --> pkg_scope
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@@ -191,6 +198,10 @@ flowchart TD
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pkg_bash_sandbox --> pkg_bash
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pkg_bash_sandbox --> pkg_bash_local
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pkg_bash_sandbox --> pkg_sandbox
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pkg_permission --> pkg_bash
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pkg_permission --> pkg_sandbox
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pkg_permission --> pkg_session
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pkg_permission --> pkg_user_approval
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pkg_agent_loop --> pkg_agent
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pkg_agent_loop --> pkg_llm
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pkg_agent_loop --> pkg_scope
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@@ -241,6 +252,7 @@ flowchart TD
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pkg_acp --> pkg_agent
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pkg_acp --> pkg_bash
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pkg_acp --> pkg_llm
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pkg_acp --> pkg_permission
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pkg_acp --> pkg_sandbox
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pkg_acp --> pkg_session
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pkg_acp --> pkg_session_persistence
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@@ -367,12 +379,14 @@ flowchart TD
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| [`hook-protocol`](../packages/hooks/hook-protocol) | `hooks` | [`bash`](../packages/bash/bash), [`session`](../packages/core/session) |
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| [`session-persistence-jsonl`](../packages/session-persistence/session-persistence-jsonl) | `session-persistence` | [`session`](../packages/core/session), [`session-persistence`](../packages/session-persistence/session-persistence) |
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| [`session-persistence-sqlite`](../packages/session-persistence/session-persistence-sqlite) | `session-persistence` | [`session`](../packages/core/session), [`session-persistence`](../packages/session-persistence/session-persistence) |
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| [`session-query`](../packages/session-query/session-query) | `session-query` | [`llm`](../packages/llm/llm), [`session`](../packages/core/session), [`session-persistence`](../packages/session-persistence/session-persistence) |
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| [`invariants`](../packages/support/invariants) | `support` | [`agent`](../packages/core/agent), [`llm`](../packages/llm/llm), [`scope`](../packages/core/scope), [`session`](../packages/core/session) |
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| [`user-approval`](../packages/ui/user-approval) | `ui` | [`agent`](../packages/core/agent), [`brand`](../packages/util/brand), [`llm`](../packages/llm/llm), [`scope`](../packages/core/scope), [`session`](../packages/core/session), [`system-prompt`](../packages/core/system-prompt) |
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| [`user-interaction`](../packages/ui/user-interaction) | `ui` | [`agent`](../packages/core/agent), [`llm`](../packages/llm/llm) |
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| [`workflow`](../packages/workflow/workflow) | `workflow` | [`agent`](../packages/core/agent), [`brand`](../packages/util/brand), [`llm`](../packages/llm/llm) |
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| [`tools`](../packages/core/tools) | `core` | [`agent`](../packages/core/agent), [`code-runtime`](../packages/code-runtime/code-runtime), [`llm`](../packages/llm/llm), [`scope`](../packages/core/scope), [`session`](../packages/core/session), [`system-prompt`](../packages/core/system-prompt), [`user-approval`](../packages/ui/user-approval) |
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| [`bash-sandbox`](../packages/bash/bash-sandbox) | `bash` | [`bash`](../packages/bash/bash), [`bash-local`](../packages/bash/bash-local), [`sandbox`](../packages/sandbox/sandbox) |
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| [`permission`](../packages/ui/permission) | `ui` | [`bash`](../packages/bash/bash), [`sandbox`](../packages/sandbox/sandbox), [`session`](../packages/core/session), [`user-approval`](../packages/ui/user-approval) |
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| [`agent-loop`](../packages/core/agent-loop) | `core` | [`agent`](../packages/core/agent), [`llm`](../packages/llm/llm), [`scope`](../packages/core/scope), [`session`](../packages/core/session), [`session-persistence`](../packages/session-persistence/session-persistence), [`system-prompt`](../packages/core/system-prompt), [`tools`](../packages/core/tools) |
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| [`tool-bash`](../packages/bash/tool-bash) | `bash` | [`agent`](../packages/core/agent), [`bash`](../packages/bash/bash), [`home`](../packages/util/home), [`llm`](../packages/llm/llm), [`sandbox`](../packages/sandbox/sandbox), [`session-persistence`](../packages/session-persistence/session-persistence), [`system-prompt`](../packages/core/system-prompt), [`tools`](../packages/core/tools), [`user-approval`](../packages/ui/user-approval) |
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| [`tool-fs`](../packages/fs/tool-fs) | `fs` | [`fs`](../packages/fs/fs), [`llm`](../packages/llm/llm), [`session`](../packages/core/session), [`system-prompt`](../packages/core/system-prompt), [`tools`](../packages/core/tools) |
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@@ -383,7 +397,7 @@ flowchart TD
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| [`tool-todo`](../packages/todo/tool-todo) | `todo` | [`agent`](../packages/core/agent), [`session`](../packages/core/session), [`tools`](../packages/core/tools) |
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| [`tool-cordis`](../packages/cordis/tool-cordis) | `cordis` | [`scope`](../packages/core/scope), [`tools`](../packages/core/tools) |
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| [`hooks-codex`](../packages/hooks/hooks-codex) | `hooks` | [`agent`](../packages/core/agent), [`hook-protocol`](../packages/hooks/hook-protocol), [`llm`](../packages/llm/llm), [`session`](../packages/core/session), [`session-persistence`](../packages/session-persistence/session-persistence), [`tools`](../packages/core/tools) |
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| [`acp`](../packages/ui/acp) | `ui` | [`agent`](../packages/core/agent), [`bash`](../packages/bash/bash), [`llm`](../packages/llm/llm), [`sandbox`](../packages/sandbox/sandbox), [`session`](../packages/core/session), [`session-persistence`](../packages/session-persistence/session-persistence), [`tools`](../packages/core/tools), [`user-approval`](../packages/ui/user-approval), [`user-interaction`](../packages/ui/user-interaction) |
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| [`acp`](../packages/ui/acp) | `ui` | [`agent`](../packages/core/agent), [`bash`](../packages/bash/bash), [`llm`](../packages/llm/llm), [`permission`](../packages/ui/permission), [`sandbox`](../packages/sandbox/sandbox), [`session`](../packages/core/session), [`session-persistence`](../packages/session-persistence/session-persistence), [`tools`](../packages/core/tools), [`user-approval`](../packages/ui/user-approval), [`user-interaction`](../packages/ui/user-interaction) |
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| [`tool-ask-user`](../packages/ui/tool-ask-user) | `ui` | [`agent`](../packages/core/agent), [`tools`](../packages/core/tools), [`user-interaction`](../packages/ui/user-interaction) |
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| [`repeat-tool-guard`](../packages/guard/repeat-tool-guard) | `guard` | [`agent`](../packages/core/agent), [`tools`](../packages/core/tools) |
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| [`tool-workflow`](../packages/workflow/tool-workflow) | `workflow` | [`agent`](../packages/core/agent), [`llm`](../packages/llm/llm), [`system-prompt`](../packages/core/system-prompt), [`tools`](../packages/core/tools), [`workflow`](../packages/workflow/workflow) |
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